Get quick answers to your questions about the article from our AI researcher chatbot
{'id': 'https://openalex.org/W2124085386', 'doi': 'https://doi.org/10.1128/jcm.01652-12', 'title': 'Transmission of Mycobacterium orygis (M. tuberculosis Complex Species) from a Tuberculosis Patient to a Dairy Cow in New Zealand', 'display_name': 'Transmission of Mycobacterium orygis (M. tuberculosis Complex Species) from a Tuberculosis Patient to a Dairy Cow in New Zealand', 'publication_year': 2012, 'publication_date': '2012-07-12', 'ids': {'openalex': 'https://openalex.org/W2124085386', 'doi': 'https://doi.org/10.1128/jcm.01652-12', 'mag': '2124085386', 'pmid': 'https://pubmed.ncbi.nlm.nih.gov/22785186', 'pmcid': 'https://www.ncbi.nlm.nih.gov/pmc/articles/3421823'}, 'language': 'en', 'primary_location': {'is_oa': True, 'landing_page_url': 'https://doi.org/10.1128/jcm.01652-12', 'pdf_url': 'https://jcm.asm.org/content/jcm/50/9/3136.full.pdf', 'source': {'id': 'https://openalex.org/S53087977', 'display_name': 'Journal of Clinical Microbiology', 'issn_l': '0095-1137', 'issn': ['0095-1137', '1070-633X', '1098-660X'], 'is_oa': False, 'is_in_doaj': False, 'is_core': True, 'host_organization': 'https://openalex.org/P4310320263', 'host_organization_name': 'American Society for Microbiology', 'host_organization_lineage': ['https://openalex.org/P4310320263'], 'host_organization_lineage_names': ['American Society for Microbiology'], 'type': 'journal'}, 'license': None, 'license_id': None, 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, 'type': 'article', 'type_crossref': 'journal-article', 'indexed_in': ['crossref', 'pubmed'], 'open_access': {'is_oa': True, 'oa_status': 'bronze', 'oa_url': 'https://jcm.asm.org/content/jcm/50/9/3136.full.pdf', 'any_repository_has_fulltext': True}, 'authorships': [{'author_position': 'first', 'author': {'id': 'https://openalex.org/A5063912896', 'display_name': 'Kara Lee Dawson', 'orcid': None}, 'institutions': [], 'countries': ['NZ'], 'is_corresponding': False, 'raw_author_name': 'Kara L. Dawson', 'raw_affiliation_strings': ['Animal Health Board, Wellington, New Zealand'], 'affiliations': [{'raw_affiliation_string': 'Animal Health Board, Wellington, New Zealand', 'institution_ids': []}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5113903965', 'display_name': 'Anita Bell', 'orcid': None}, 'institutions': [{'id': 'https://openalex.org/I4210128594', 'display_name': 'Waikato District Health Board', 'ror': 'https://ror.org/032d3jq51', 'country_code': 'NZ', 'type': 'healthcare', 'lineage': ['https://openalex.org/I4210128594']}], 'countries': ['NZ'], 'is_corresponding': False, 'raw_author_name': 'Anita Bell', 'raw_affiliation_strings': ['bWaikato District Health Board, Hamilton, New Zealand'], 'affiliations': [{'raw_affiliation_string': 'bWaikato District Health Board, Hamilton, New Zealand', 'institution_ids': ['https://openalex.org/I4210128594']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5085513622', 'display_name': 'Rika Kawakami', 'orcid': 'https://orcid.org/0000-0002-2904-4993'}, 'institutions': [{'id': 'https://openalex.org/I41125697', 'display_name': 'AgResearch', 'ror': 'https://ror.org/0124gwh94', 'country_code': 'NZ', 'type': 'government', 'lineage': ['https://openalex.org/I2799419803', 'https://openalex.org/I41125697']}], 'countries': ['NZ'], 'is_corresponding': False, 'raw_author_name': 'R. Pamela Kawakami', 'raw_affiliation_strings': ['cAgResearch, NCBID Wallaceville, Upper Hutt, New Zealand'], 'affiliations': [{'raw_affiliation_string': 'cAgResearch, NCBID Wallaceville, Upper Hutt, New Zealand', 'institution_ids': ['https://openalex.org/I41125697']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5035523363', 'display_name': 'Kathryn Coley', 'orcid': None}, 'institutions': [{'id': 'https://openalex.org/I4210128594', 'display_name': 'Waikato District Health Board', 'ror': 'https://ror.org/032d3jq51', 'country_code': 'NZ', 'type': 'healthcare', 'lineage': ['https://openalex.org/I4210128594']}], 'countries': ['NZ'], 'is_corresponding': False, 'raw_author_name': 'Kathryn Coley', 'raw_affiliation_strings': ['bWaikato District Health Board, Hamilton, New Zealand'], 'affiliations': [{'raw_affiliation_string': 'bWaikato District Health Board, Hamilton, New Zealand', 'institution_ids': ['https://openalex.org/I4210128594']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5049737461', 'display_name': 'Gary F. Yates', 'orcid': 'https://orcid.org/0000-0002-1301-2452'}, 'institutions': [{'id': 'https://openalex.org/I41125697', 'display_name': 'AgResearch', 'ror': 'https://ror.org/0124gwh94', 'country_code': 'NZ', 'type': 'government', 'lineage': ['https://openalex.org/I2799419803', 'https://openalex.org/I41125697']}], 'countries': ['NZ'], 'is_corresponding': False, 'raw_author_name': 'Gary Yates', 'raw_affiliation_strings': ['cAgResearch, NCBID Wallaceville, Upper Hutt, New Zealand'], 'affiliations': [{'raw_affiliation_string': 'cAgResearch, NCBID Wallaceville, Upper Hutt, New Zealand', 'institution_ids': ['https://openalex.org/I41125697']}]}, {'author_position': 'last', 'author': {'id': 'https://openalex.org/A5073090615', 'display_name': 'Desmond M. Collins', 'orcid': 'https://orcid.org/0000-0002-2131-2703'}, 'institutions': [{'id': 'https://openalex.org/I41125697', 'display_name': 'AgResearch', 'ror': 'https://ror.org/0124gwh94', 'country_code': 'NZ', 'type': 'government', 'lineage': ['https://openalex.org/I2799419803', 'https://openalex.org/I41125697']}], 'countries': ['NZ'], 'is_corresponding': False, 'raw_author_name': 'Desmond M. Collins', 'raw_affiliation_strings': ['cAgResearch, NCBID Wallaceville, Upper Hutt, New Zealand'], 'affiliations': [{'raw_affiliation_string': 'cAgResearch, NCBID Wallaceville, Upper Hutt, New Zealand', 'institution_ids': ['https://openalex.org/I41125697']}]}], 'institution_assertions': [], 'countries_distinct_count': 1, 'institutions_distinct_count': 2, 'corresponding_author_ids': [], 'corresponding_institution_ids': [], 'apc_list': None, 'apc_paid': None, 'fwci': 1.308, 'has_fulltext': True, 'fulltext_origin': 'ngrams', 'cited_by_count': 60, 'citation_normalized_percentile': {'value': 0.885674, 'is_in_top_1_percent': False, 'is_in_top_10_percent': False}, 'cited_by_percentile_year': {'min': 96, 'max': 97}, 'biblio': {'volume': '50', 'issue': '9', 'first_page': '3136', 'last_page': '3138'}, 'is_retracted': False, 'is_paratext': False, 'primary_topic': {'id': 'https://openalex.org/T11316', 'display_name': 'Mycobacterium research and diagnosis', 'score': 1.0, 'subfield': {'id': 'https://openalex.org/subfields/2713', 'display_name': 'Epidemiology'}, 'field': {'id': 'https://openalex.org/fields/27', 'display_name': 'Medicine'}, 'domain': {'id': 'https://openalex.org/domains/4', 'display_name': 'Health Sciences'}}, 'topics': [{'id': 'https://openalex.org/T11316', 'display_name': 'Mycobacterium research and diagnosis', 'score': 1.0, 'subfield': {'id': 'https://openalex.org/subfields/2713', 'display_name': 'Epidemiology'}, 'field': {'id': 'https://openalex.org/fields/27', 'display_name': 'Medicine'}, 'domain': {'id': 'https://openalex.org/domains/4', 'display_name': 'Health Sciences'}}, {'id': 'https://openalex.org/T10038', 'display_name': 'Tuberculosis Research and Epidemiology', 'score': 0.9999, 'subfield': {'id': 'https://openalex.org/subfields/2725', 'display_name': 'Infectious Diseases'}, 'field': {'id': 'https://openalex.org/fields/27', 'display_name': 'Medicine'}, 'domain': {'id': 'https://openalex.org/domains/4', 'display_name': 'Health Sciences'}}, {'id': 'https://openalex.org/T12578', 'display_name': 'Diagnosis and treatment of tuberculosis', 'score': 0.9953, 'subfield': {'id': 'https://openalex.org/subfields/2746', 'display_name': 'Surgery'}, 'field': {'id': 'https://openalex.org/fields/27', 'display_name': 'Medicine'}, 'domain': {'id': 'https://openalex.org/domains/4', 'display_name': 'Health Sciences'}}], 'keywords': [{'id': 'https://openalex.org/keywords/mycobacterium-tuberculosis-complex', 'display_name': 'Mycobacterium tuberculosis complex', 'score': 0.7100135}], 'concepts': [{'id': 'https://openalex.org/C2781069245', 'wikidata': 'https://www.wikidata.org/wiki/Q12204', 'display_name': 'Tuberculosis', 'level': 2, 'score': 0.76136506}, {'id': 'https://openalex.org/C2777975735', 'wikidata': 'https://www.wikidata.org/wiki/Q130971', 'display_name': 'Mycobacterium tuberculosis', 'level': 3, 'score': 0.74692994}, {'id': 'https://openalex.org/C2779790121', 'wikidata': 'https://www.wikidata.org/wiki/Q5779917', 'display_name': 'Mycobacterium tuberculosis complex', 'level': 4, 'score': 0.7100135}, {'id': 'https://openalex.org/C761482', 'wikidata': 'https://www.wikidata.org/wiki/Q118093', 'display_name': 'Transmission (telecommunications)', 'level': 2, 'score': 0.633842}, {'id': 'https://openalex.org/C89423630', 'wikidata': 'https://www.wikidata.org/wiki/Q7193', 'display_name': 'Microbiology', 'level': 1, 'score': 0.47004333}, {'id': 'https://openalex.org/C86803240', 'wikidata': 'https://www.wikidata.org/wiki/Q420', 'display_name': 'Biology', 'level': 0, 'score': 0.4391805}, {'id': 'https://openalex.org/C159047783', 'wikidata': 'https://www.wikidata.org/wiki/Q7215', 'display_name': 'Virology', 'level': 1, 'score': 0.42043042}, {'id': 'https://openalex.org/C71924100', 'wikidata': 'https://www.wikidata.org/wiki/Q11190', 'display_name': 'Medicine', 'level': 0, 'score': 0.33400774}, {'id': 'https://openalex.org/C142724271', 'wikidata': 'https://www.wikidata.org/wiki/Q7208', 'display_name': 'Pathology', 'level': 1, 'score': 0.14245719}, {'id': 'https://openalex.org/C76155785', 'wikidata': 'https://www.wikidata.org/wiki/Q418', 'display_name': 'Telecommunications', 'level': 1, 'score': 0.097424656}, {'id': 'https://openalex.org/C41008148', 'wikidata': 'https://www.wikidata.org/wiki/Q21198', 'display_name': 'Computer science', 'level': 0, 'score': 0.07965091}], 'mesh': [{'descriptor_ui': 'D009161', 'descriptor_name': 'Mycobacterium', 'qualifier_ui': 'Q000302', 'qualifier_name': 'isolation & purification', 'is_major_topic': True}, {'descriptor_ui': 'D014376', 'descriptor_name': 'Tuberculosis', 'qualifier_ui': 'Q000635', 'qualifier_name': 'transmission', 'is_major_topic': True}, {'descriptor_ui': 'D014376', 'descriptor_name': 'Tuberculosis', 'qualifier_ui': 'Q000382', 'qualifier_name': 'microbiology', 'is_major_topic': True}, {'descriptor_ui': 'D014380', 'descriptor_name': 'Tuberculosis, Bovine', 'qualifier_ui': 'Q000382', 'qualifier_name': 'microbiology', 'is_major_topic': True}, {'descriptor_ui': 'D014380', 'descriptor_name': 'Tuberculosis, Bovine', 'qualifier_ui': 'Q000175', 'qualifier_name': 'diagnosis', 'is_major_topic': True}, {'descriptor_ui': 'D000328', 'descriptor_name': 'Adult', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D000818', 'descriptor_name': 'Animals', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D002417', 'descriptor_name': 'Cattle', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D027081', 'descriptor_name': 'DNA Gyrase', 'qualifier_ui': 'Q000235', 'qualifier_name': 'genetics', 'is_major_topic': False}, {'descriptor_ui': 'D027081', 'descriptor_name': 'DNA Gyrase', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D005260', 'descriptor_name': 'Female', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D005838', 'descriptor_name': 'Genotype', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D006801', 'descriptor_name': 'Humans', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D017720', 'descriptor_name': 'Molecular Epidemiology', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D058889', 'descriptor_name': 'Molecular Typing', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D009161', 'descriptor_name': 'Mycobacterium', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D009161', 'descriptor_name': 'Mycobacterium', 'qualifier_ui': 'Q000145', 'qualifier_name': 'classification', 'is_major_topic': False}, {'descriptor_ui': 'D009520', 'descriptor_name': 'New Zealand', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D010802', 'descriptor_name': 'Phylogeny', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D016133', 'descriptor_name': 'Polymerase Chain Reaction', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D014376', 'descriptor_name': 'Tuberculosis', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D014380', 'descriptor_name': 'Tuberculosis, Bovine', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}], 'locations_count': 4, 'locations': [{'is_oa': True, 'landing_page_url': 'https://doi.org/10.1128/jcm.01652-12', 'pdf_url': 'https://jcm.asm.org/content/jcm/50/9/3136.full.pdf', 'source': {'id': 'https://openalex.org/S53087977', 'display_name': 'Journal of Clinical Microbiology', 'issn_l': '0095-1137', 'issn': ['0095-1137', '1070-633X', '1098-660X'], 'is_oa': False, 'is_in_doaj': False, 'is_core': True, 'host_organization': 'https://openalex.org/P4310320263', 'host_organization_name': 'American Society for Microbiology', 'host_organization_lineage': ['https://openalex.org/P4310320263'], 'host_organization_lineage_names': ['American Society for Microbiology'], 'type': 'journal'}, 'license': None, 'license_id': None, 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, {'is_oa': True, 'landing_page_url': 'https://europepmc.org/articles/pmc3421823', 'pdf_url': 'https://europepmc.org/articles/pmc3421823?pdf=render', 'source': {'id': 'https://openalex.org/S4306400806', 'display_name': 'Europe PMC (PubMed Central)', 'issn_l': None, 'issn': None, 'is_oa': True, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I1303153112', 'host_organization_name': 'European Bioinformatics Institute', 'host_organization_lineage': ['https://openalex.org/I1303153112'], 'host_organization_lineage_names': ['European Bioinformatics Institute'], 'type': 'repository'}, 'license': None, 'license_id': None, 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, {'is_oa': True, 'landing_page_url': 'https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3421823', 'pdf_url': None, 'source': {'id': 'https://openalex.org/S2764455111', 'display_name': 'PubMed Central', 'issn_l': None, 'issn': None, 'is_oa': True, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I1299303238', 'host_organization_name': 'National Institutes of Health', 'host_organization_lineage': ['https://openalex.org/I1299303238'], 'host_organization_lineage_names': ['National Institutes of Health'], 'type': 'repository'}, 'license': None, 'license_id': None, 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, {'is_oa': False, 'landing_page_url': 'https://pubmed.ncbi.nlm.nih.gov/22785186', 'pdf_url': None, 'source': {'id': 'https://openalex.org/S4306525036', 'display_name': 'PubMed', 'issn_l': None, 'issn': None, 'is_oa': False, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I1299303238', 'host_organization_name': 'National Institutes of Health', 'host_organization_lineage': ['https://openalex.org/I1299303238'], 'host_organization_lineage_names': ['National Institutes of Health'], 'type': 'repository'}, 'license': None, 'license_id': None, 'version': None, 'is_accepted': False, 'is_published': False}], 'best_oa_location': {'is_oa': True, 'landing_page_url': 'https://doi.org/10.1128/jcm.01652-12', 'pdf_url': 'https://jcm.asm.org/content/jcm/50/9/3136.full.pdf', 'source': {'id': 'https://openalex.org/S53087977', 'display_name': 'Journal of Clinical Microbiology', 'issn_l': '0095-1137', 'issn': ['0095-1137', '1070-633X', '1098-660X'], 'is_oa': False, 'is_in_doaj': False, 'is_core': True, 'host_organization': 'https://openalex.org/P4310320263', 'host_organization_name': 'American Society for Microbiology', 'host_organization_lineage': ['https://openalex.org/P4310320263'], 'host_organization_lineage_names': ['American Society for Microbiology'], 'type': 'journal'}, 'license': None, 'license_id': None, 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, 'sustainable_development_goals': [{'score': 0.51, 'id': 'https://metadata.un.org/sdg/2', 'display_name': 'Zero hunger'}], 'grants': [], 'datasets': [], 'versions': [], 'referenced_works_count': 17, 'referenced_works': ['https://openalex.org/W123607565', 'https://openalex.org/W1912296803', 'https://openalex.org/W1922512417', 'https://openalex.org/W1977074669', 'https://openalex.org/W2006140529', 'https://openalex.org/W2019350026', 'https://openalex.org/W2042349371', 'https://openalex.org/W2073058808', 'https://openalex.org/W2081366807', 'https://openalex.org/W2094681256', 'https://openalex.org/W2102030014', 'https://openalex.org/W2103806571', 'https://openalex.org/W2136155710', 'https://openalex.org/W2137340517', 'https://openalex.org/W2147642001', 'https://openalex.org/W2167286853', 'https://openalex.org/W2171990304'], 'related_works': ['https://openalex.org/W4308058527', 'https://openalex.org/W4210506554', 'https://openalex.org/W3160640465', 'https://openalex.org/W2972094210', 'https://openalex.org/W2411061500', 'https://openalex.org/W2110949356', 'https://openalex.org/W2050407936', 'https://openalex.org/W2042252940', 'https://openalex.org/W1986832896', 'https://openalex.org/W1538374398'], 'abstract_inverted_index': {'ABSTRACT': [0], 'Mycobacterium': [1, 14], 'orygis': [2], ',': [3], 'previously': [4], 'called': [5], 'the': [6, 13, 37, 41], 'oryx': [7], 'bacillus,': [8], 'is': [9], 'a': [10, 24, 47, 50], 'member': [11], 'of': [12, 26, 31, 43], 'tuberculosis': [15, 28], 'complex': [16], 'and': [17], 'has': [18], 'been': [19], 'reported': [20], 'only': [21], 'recently': [22], 'as': [23], 'cause': [25], 'human': [27, 48], 'in': [29], 'patients': [30], 'South': [32], 'Asian': [33], 'origin.': [34], 'We': [35], 'present': [36], 'first': [38], 'case': [39], 'documenting': [40], 'transmission': [42], 'this': [44], 'organism': [45], 'from': [46], 'to': [49], 'cow.': [51]}, 'cited_by_api_url': 'https://api.openalex.org/works?filter=cites:W2124085386', 'counts_by_year': [{'year': 2024, 'cited_by_count': 8}, {'year': 2023, 'cited_by_count': 8}, {'year': 2022, 'cited_by_count': 3}, {'year': 2021, 'cited_by_count': 7}, {'year': 2020, 'cited_by_count': 6}, {'year': 2019, 'cited_by_count': 6}, {'year': 2018, 'cited_by_count': 4}, {'year': 2017, 'cited_by_count': 6}, {'year': 2016, 'cited_by_count': 4}, {'year': 2015, 'cited_by_count': 1}, {'year': 2014, 'cited_by_count': 5}], 'updated_date': '2024-12-29T10:15:27.997127', 'created_date': '2016-06-24'}