Publication Information

{'id': 'https://openalex.org/W4386590326', 'doi': 'https://doi.org/10.1093/sysbio/syad057', 'title': 'Two Notorious Nodes: A Critical Examination of Relaxed Molecular Clock Age Estimates of the Bilaterian Animals and Placental Mammals', 'display_name': 'Two Notorious Nodes: A Critical Examination of Relaxed Molecular Clock Age Estimates of the Bilaterian Animals and Placental Mammals', 'publication_year': 2023, 'publication_date': '2023-09-11', 'ids': {'openalex': 'https://openalex.org/W4386590326', 'doi': 'https://doi.org/10.1093/sysbio/syad057', 'pmid': 'https://pubmed.ncbi.nlm.nih.gov/37695319'}, 'language': 'en', 'primary_location': {'is_oa': True, 'landing_page_url': 'https://doi.org/10.1093/sysbio/syad057', 'pdf_url': 'https://academic.oup.com/sysbio/advance-article-pdf/doi/10.1093/sysbio/syad057/51515941/syad057.pdf', 'source': {'id': 'https://openalex.org/S65478581', 'display_name': 'Systematic Biology', 'issn_l': '1063-5157', 'issn': ['1063-5157', '1076-836X'], 'is_oa': False, 'is_in_doaj': False, 'is_core': True, 'host_organization': 'https://openalex.org/P4310311648', 'host_organization_name': 'Oxford University Press', 'host_organization_lineage': ['https://openalex.org/P4310311647', 'https://openalex.org/P4310311648'], 'host_organization_lineage_names': ['University of Oxford', 'Oxford University Press'], 'type': 'journal'}, 'license': 'cc-by-nc', 'license_id': 'https://openalex.org/licenses/cc-by-nc', 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, 'type': 'article', 'type_crossref': 'journal-article', 'indexed_in': ['crossref', 'pubmed'], 'open_access': {'is_oa': True, 'oa_status': 'hybrid', 'oa_url': 'https://academic.oup.com/sysbio/advance-article-pdf/doi/10.1093/sysbio/syad057/51515941/syad057.pdf', 'any_repository_has_fulltext': True}, 'authorships': [{'author_position': 'first', 'author': {'id': 'https://openalex.org/A5068768940', 'display_name': 'Graham E. Budd', 'orcid': 'https://orcid.org/0000-0001-9007-4369'}, 'institutions': [{'id': 'https://openalex.org/I123387679', 'display_name': 'Uppsala University', 'ror': 'https://ror.org/048a87296', 'country_code': 'SE', 'type': 'education', 'lineage': ['https://openalex.org/I123387679']}], 'countries': ['SE'], 'is_corresponding': False, 'raw_author_name': 'Graham E Budd', 'raw_affiliation_strings': ['Department of Earth Sciences, Palaeobiology Programme, Uppsala University , Villavägen 16 SE 75236 , Sweden'], 'affiliations': [{'raw_affiliation_string': 'Department of Earth Sciences, Palaeobiology Programme, Uppsala University , Villavägen 16 SE 75236 , Sweden', 'institution_ids': ['https://openalex.org/I123387679']}]}, {'author_position': 'last', 'author': {'id': 'https://openalex.org/A5014611168', 'display_name': 'Richard P. Mann', 'orcid': 'https://orcid.org/0000-0003-0701-1274'}, 'institutions': [{'id': 'https://openalex.org/I130828816', 'display_name': 'University of Leeds', 'ror': 'https://ror.org/024mrxd33', 'country_code': 'GB', 'type': 'education', 'lineage': ['https://openalex.org/I130828816']}], 'countries': ['GB'], 'is_corresponding': False, 'raw_author_name': 'Richard P Mann', 'raw_affiliation_strings': ['Department of Statistics, School of Mathematics, University of Leeds , Leeds LS2 9JT , UK'], 'affiliations': [{'raw_affiliation_string': 'Department of Statistics, School of Mathematics, University of Leeds , Leeds LS2 9JT , UK', 'institution_ids': ['https://openalex.org/I130828816']}]}], 'institution_assertions': [], 'countries_distinct_count': 2, 'institutions_distinct_count': 2, 'corresponding_author_ids': [], 'corresponding_institution_ids': [], 'apc_list': {'value': 1984, 'currency': 'USD', 'value_usd': 1984, 'provenance': 'doaj'}, 'apc_paid': {'value': 1984, 'currency': 'USD', 'value_usd': 1984, 'provenance': 'doaj'}, 'fwci': 6.003, 'has_fulltext': True, 'fulltext_origin': 'pdf', 'cited_by_count': 13, 'citation_normalized_percentile': {'value': 0.999579, 'is_in_top_1_percent': True, 'is_in_top_10_percent': True}, 'cited_by_percentile_year': {'min': 97, 'max': 98}, 'biblio': {'volume': '73', 'issue': '1', 'first_page': '223', 'last_page': '234'}, 'is_retracted': False, 'is_paratext': False, 'primary_topic': {'id': 'https://openalex.org/T11354', 'display_name': 'Evolution and Paleontology Studies', 'score': 0.9993, 'subfield': {'id': 'https://openalex.org/subfields/1911', 'display_name': 'Paleontology'}, 'field': {'id': 'https://openalex.org/fields/19', 'display_name': 'Earth and Planetary Sciences'}, 'domain': {'id': 'https://openalex.org/domains/3', 'display_name': 'Physical Sciences'}}, 'topics': [{'id': 'https://openalex.org/T11354', 'display_name': 'Evolution and Paleontology Studies', 'score': 0.9993, 'subfield': {'id': 'https://openalex.org/subfields/1911', 'display_name': 'Paleontology'}, 'field': {'id': 'https://openalex.org/fields/19', 'display_name': 'Earth and Planetary Sciences'}, 'domain': {'id': 'https://openalex.org/domains/3', 'display_name': 'Physical Sciences'}}, {'id': 'https://openalex.org/T10015', 'display_name': 'Genomics and Phylogenetic Studies', 'score': 0.9983, 'subfield': {'id': 'https://openalex.org/subfields/1312', 'display_name': 'Molecular Biology'}, 'field': {'id': 'https://openalex.org/fields/13', 'display_name': 'Biochemistry, Genetics and Molecular Biology'}, 'domain': {'id': 'https://openalex.org/domains/1', 'display_name': 'Life Sciences'}}, {'id': 'https://openalex.org/T10955', 'display_name': 'Paleontology and Evolutionary Biology', 'score': 0.9837, 'subfield': {'id': 'https://openalex.org/subfields/1911', 'display_name': 'Paleontology'}, 'field': {'id': 'https://openalex.org/fields/19', 'display_name': 'Earth and Planetary Sciences'}, 'domain': {'id': 'https://openalex.org/domains/3', 'display_name': 'Physical Sciences'}}], 'keywords': [{'id': 'https://openalex.org/keywords/molecular-clock', 'display_name': 'Molecular clock', 'score': 0.8189804}, {'id': 'https://openalex.org/keywords/fossil-record', 'display_name': 'Fossil Record', 'score': 0.5156611}, {'id': 'https://openalex.org/keywords/extinction', 'display_name': 'Extinction (optical mineralogy)', 'score': 0.4532432}], 'concepts': [{'id': 'https://openalex.org/C44465124', 'wikidata': 'https://www.wikidata.org/wiki/Q713623', 'display_name': 'Clade', 'level': 4, 'score': 0.8974163}, {'id': 'https://openalex.org/C86803240', 'wikidata': 'https://www.wikidata.org/wiki/Q420', 'display_name': 'Biology', 'level': 0, 'score': 0.8661721}, {'id': 'https://openalex.org/C196662502', 'wikidata': 'https://www.wikidata.org/wiki/Q827541', 'display_name': 'Molecular clock', 'level': 4, 'score': 0.8189804}, {'id': 'https://openalex.org/C78458016', 'wikidata': 'https://www.wikidata.org/wiki/Q840400', 'display_name': 'Evolutionary biology', 'level': 1, 'score': 0.6909158}, {'id': 'https://openalex.org/C192209626', 'wikidata': 'https://www.wikidata.org/wiki/Q190909', 'display_name': 'Focus (optics)', 'level': 2, 'score': 0.52501947}, {'id': 'https://openalex.org/C2776110070', 'wikidata': 'https://www.wikidata.org/wiki/Q2455930', 'display_name': 'Fossil Record', 'level': 2, 'score': 0.5156611}, {'id': 'https://openalex.org/C151730666', 'wikidata': 'https://www.wikidata.org/wiki/Q7205', 'display_name': 'Paleontology', 'level': 1, 'score': 0.5000098}, {'id': 'https://openalex.org/C101991246', 'wikidata': 'https://www.wikidata.org/wiki/Q5422078', 'display_name': 'Extinction (optical mineralogy)', 'level': 2, 'score': 0.4532432}, {'id': 'https://openalex.org/C35306142', 'wikidata': 'https://www.wikidata.org/wiki/Q55814', 'display_name': 'Extinction event', 'level': 4, 'score': 0.45058084}, {'id': 'https://openalex.org/C2776214188', 'wikidata': 'https://www.wikidata.org/wiki/Q408386', 'display_name': 'Inference', 'level': 2, 'score': 0.42601585}, {'id': 'https://openalex.org/C90856448', 'wikidata': 'https://www.wikidata.org/wiki/Q431', 'display_name': 'Zoology', 'level': 1, 'score': 0.4056219}, {'id': 'https://openalex.org/C90132467', 'wikidata': 'https://www.wikidata.org/wiki/Q171184', 'display_name': 'Phylogenetics', 'level': 3, 'score': 0.34387925}, {'id': 'https://openalex.org/C54355233', 'wikidata': 'https://www.wikidata.org/wiki/Q7162', 'display_name': 'Genetics', 'level': 1, 'score': 0.17707941}, {'id': 'https://openalex.org/C47559259', 'wikidata': 'https://www.wikidata.org/wiki/Q778143', 'display_name': 'Biological dispersal', 'level': 3, 'score': 0.1770021}, {'id': 'https://openalex.org/C104317684', 'wikidata': 'https://www.wikidata.org/wiki/Q7187', 'display_name': 'Gene', 'level': 2, 'score': 0.16250202}, {'id': 'https://openalex.org/C149923435', 'wikidata': 'https://www.wikidata.org/wiki/Q37732', 'display_name': 'Demography', 'level': 1, 'score': 0.1175431}, {'id': 'https://openalex.org/C41008148', 'wikidata': 'https://www.wikidata.org/wiki/Q21198', 'display_name': 'Computer science', 'level': 0, 'score': 0.076322705}, {'id': 'https://openalex.org/C154945302', 'wikidata': 'https://www.wikidata.org/wiki/Q11660', 'display_name': 'Artificial intelligence', 'level': 1, 'score': 0.07432544}, {'id': 'https://openalex.org/C2908647359', 'wikidata': 'https://www.wikidata.org/wiki/Q2625603', 'display_name': 'Population', 'level': 2, 'score': 0.0}, {'id': 'https://openalex.org/C121332964', 'wikidata': 'https://www.wikidata.org/wiki/Q413', 'display_name': 'Physics', 'level': 0, 'score': 0.0}, {'id': 'https://openalex.org/C144024400', 'wikidata': 'https://www.wikidata.org/wiki/Q21201', 'display_name': 'Sociology', 'level': 0, 'score': 0.0}, {'id': 'https://openalex.org/C120665830', 'wikidata': 'https://www.wikidata.org/wiki/Q14620', 'display_name': 'Optics', 'level': 1, 'score': 0.0}], 'mesh': [{'descriptor_ui': 'D000818', 'descriptor_name': 'Animals', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D001499', 'descriptor_name': 'Bayes Theorem', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D000073566', 'descriptor_name': 'Eutheria', 'qualifier_ui': 'Q000145', 'qualifier_name': 'classification', 'is_major_topic': False}, {'descriptor_ui': 'D019143', 'descriptor_name': 'Evolution, Molecular', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D005580', 'descriptor_name': 'Fossils', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D008322', 'descriptor_name': 'Mammals', 'qualifier_ui': 'Q000235', 'qualifier_name': 'genetics', 'is_major_topic': False}, {'descriptor_ui': 'D010802', 'descriptor_name': 'Phylogeny', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}], 'locations_count': 6, 'locations': [{'is_oa': True, 'landing_page_url': 'https://doi.org/10.1093/sysbio/syad057', 'pdf_url': 'https://academic.oup.com/sysbio/advance-article-pdf/doi/10.1093/sysbio/syad057/51515941/syad057.pdf', 'source': {'id': 'https://openalex.org/S65478581', 'display_name': 'Systematic Biology', 'issn_l': '1063-5157', 'issn': ['1063-5157', '1076-836X'], 'is_oa': False, 'is_in_doaj': False, 'is_core': True, 'host_organization': 'https://openalex.org/P4310311648', 'host_organization_name': 'Oxford University Press', 'host_organization_lineage': ['https://openalex.org/P4310311647', 'https://openalex.org/P4310311648'], 'host_organization_lineage_names': ['University of Oxford', 'Oxford University Press'], 'type': 'journal'}, 'license': 'cc-by-nc', 'license_id': 'https://openalex.org/licenses/cc-by-nc', 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, {'is_oa': True, 'landing_page_url': 'https://eprints.whiterose.ac.uk/202977/7/syad057.pdf', 'pdf_url': 'https://eprints.whiterose.ac.uk/202977/7/syad057.pdf', 'source': {'id': 'https://openalex.org/S4306400854', 'display_name': 'White Rose Research Online (University of Leeds, The University of Sheffield, University of York)', 'issn_l': None, 'issn': None, 'is_oa': True, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I2800616092', 'host_organization_name': 'White Rose University Consortium', 'host_organization_lineage': ['https://openalex.org/I2800616092'], 'host_organization_lineage_names': ['White Rose University Consortium'], 'type': 'repository'}, 'license': 'cc-by-nc', 'license_id': 'https://openalex.org/licenses/cc-by-nc', 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, {'is_oa': True, 'landing_page_url': 'https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11129587', 'pdf_url': None, 'source': {'id': 'https://openalex.org/S2764455111', 'display_name': 'PubMed Central', 'issn_l': None, 'issn': None, 'is_oa': True, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I1299303238', 'host_organization_name': 'National Institutes of Health', 'host_organization_lineage': ['https://openalex.org/I1299303238'], 'host_organization_lineage_names': ['National Institutes of Health'], 'type': 'repository'}, 'license': None, 'license_id': None, 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, {'is_oa': True, 'landing_page_url': 'https://doi.org/10.1101/2022.07.01.498494', 'pdf_url': 'https://www.biorxiv.org/content/biorxiv/early/2022/07/03/2022.07.01.498494.full.pdf', 'source': None, 'license': 'cc-by-nd', 'license_id': 'https://openalex.org/licenses/cc-by-nd', 'version': 'submittedVersion', 'is_accepted': False, 'is_published': False}, {'is_oa': True, 'landing_page_url': 'https://zenodo.org/record/7242917', 'pdf_url': 'https://zenodo.org/records/7242917/files/Supplementary_Material.pdf', 'source': {'id': 'https://openalex.org/S4306400562', 'display_name': 'Zenodo (CERN European Organization for Nuclear Research)', 'issn_l': None, 'issn': None, 'is_oa': True, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I67311998', 'host_organization_name': 'European Organization for Nuclear Research', 'host_organization_lineage': ['https://openalex.org/I67311998'], 'host_organization_lineage_names': ['European Organization for Nuclear Research'], 'type': 'repository'}, 'license': 'public-domain', 'license_id': 'https://openalex.org/licenses/public-domain', 'version': 'submittedVersion', 'is_accepted': False, 'is_published': False}, {'is_oa': False, 'landing_page_url': 'https://pubmed.ncbi.nlm.nih.gov/37695319', 'pdf_url': None, 'source': {'id': 'https://openalex.org/S4306525036', 'display_name': 'PubMed', 'issn_l': None, 'issn': None, 'is_oa': False, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I1299303238', 'host_organization_name': 'National Institutes of Health', 'host_organization_lineage': ['https://openalex.org/I1299303238'], 'host_organization_lineage_names': ['National Institutes of Health'], 'type': 'repository'}, 'license': None, 'license_id': None, 'version': None, 'is_accepted': False, 'is_published': False}], 'best_oa_location': {'is_oa': True, 'landing_page_url': 'https://doi.org/10.1093/sysbio/syad057', 'pdf_url': 'https://academic.oup.com/sysbio/advance-article-pdf/doi/10.1093/sysbio/syad057/51515941/syad057.pdf', 'source': {'id': 'https://openalex.org/S65478581', 'display_name': 'Systematic Biology', 'issn_l': '1063-5157', 'issn': ['1063-5157', '1076-836X'], 'is_oa': False, 'is_in_doaj': False, 'is_core': True, 'host_organization': 'https://openalex.org/P4310311648', 'host_organization_name': 'Oxford University Press', 'host_organization_lineage': ['https://openalex.org/P4310311647', 'https://openalex.org/P4310311648'], 'host_organization_lineage_names': ['University of Oxford', 'Oxford University Press'], 'type': 'journal'}, 'license': 'cc-by-nc', 'license_id': 'https://openalex.org/licenses/cc-by-nc', 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, 'sustainable_development_goals': [], 'grants': [{'funder': 'https://openalex.org/F4320322581', 'funder_display_name': 'Vetenskapsrådet', 'award_id': '2022-03522'}], 'datasets': [], 'versions': [], 'referenced_works_count': 69, 'referenced_works': ['https://openalex.org/W1531684891', 'https://openalex.org/W1887892324', 'https://openalex.org/W1962669040', 'https://openalex.org/W1964525108', 'https://openalex.org/W1992714434', 'https://openalex.org/W1993655526', 'https://openalex.org/W1995587131', 'https://openalex.org/W1999632251', 'https://openalex.org/W2003894903', 'https://openalex.org/W2005571584', 'https://openalex.org/W2027480218', 'https://openalex.org/W2036628186', 'https://openalex.org/W2052130576', 'https://openalex.org/W2073635400', 'https://openalex.org/W2079292425', 'https://openalex.org/W2092160920', 'https://openalex.org/W2099893880', 'https://openalex.org/W2101877523', 'https://openalex.org/W2110335151', 'https://openalex.org/W2110547811', 'https://openalex.org/W2118845307', 'https://openalex.org/W2124772083', 'https://openalex.org/W2129742701', 'https://openalex.org/W2130362098', 'https://openalex.org/W2131633033', 'https://openalex.org/W2139771752', 'https://openalex.org/W2148377177', 'https://openalex.org/W2150491897', 'https://openalex.org/W2158187424', 'https://openalex.org/W2160918824', 'https://openalex.org/W2164214415', 'https://openalex.org/W2180090668', 'https://openalex.org/W2193987013', 'https://openalex.org/W2207288795', 'https://openalex.org/W2391173144', 'https://openalex.org/W2408731419', 'https://openalex.org/W2433199851', 'https://openalex.org/W2560365411', 'https://openalex.org/W2566492901', 'https://openalex.org/W2734462687', 'https://openalex.org/W2745985912', 'https://openalex.org/W2747131829', 'https://openalex.org/W2770060367', 'https://openalex.org/W2788554788', 'https://openalex.org/W2901927999', 'https://openalex.org/W2902274148', 'https://openalex.org/W2909541161', 'https://openalex.org/W2909712482', 'https://openalex.org/W2924976775', 'https://openalex.org/W2949493136', 'https://openalex.org/W2952412105', 'https://openalex.org/W2983202100', 'https://openalex.org/W2985039433', 'https://openalex.org/W3008198150', 'https://openalex.org/W3034864501', 'https://openalex.org/W3045693398', 'https://openalex.org/W3081788414', 'https://openalex.org/W3185685658', 'https://openalex.org/W3193338963', 'https://openalex.org/W4200339067', 'https://openalex.org/W4211184576', 'https://openalex.org/W4220890610', 'https://openalex.org/W4221000491', 'https://openalex.org/W4221125846', 'https://openalex.org/W4224244662', 'https://openalex.org/W4225692575', 'https://openalex.org/W4225822252', 'https://openalex.org/W4226389416', 'https://openalex.org/W4235889006'], 'related_works': ['https://openalex.org/W4386773163', 'https://openalex.org/W4386281579', 'https://openalex.org/W4306865051', 'https://openalex.org/W4254879227', 'https://openalex.org/W2954885238', 'https://openalex.org/W2754242622', 'https://openalex.org/W2175423925', 'https://openalex.org/W2059609768', 'https://openalex.org/W1950240727', 'https://openalex.org/W1530927872'], 'abstract_inverted_index': {'Abstract': [0], 'The': [1], 'popularity': [2], 'of': [3, 8, 25, 59, 88, 112, 129, 132, 147], 'relaxed': [4], 'clock': [5, 80, 149], 'Bayesian': [6], 'inference': [7], 'clade': [9, 90], 'origin': [10, 87], 'timings': [11, 131], 'has': [12], 'generated': [13], 'several': [14], 'recent': [15], 'publications': [16], 'with': [17], 'focal': [18], 'results': [19], 'considerably': [20], 'older': [21], 'than': [22, 92], 'the': [23, 26, 37, 43, 46, 52, 78, 89, 97, 110, 113, 130, 139], 'fossils': [24], 'clades': [27, 104], 'in': [28, 74, 109, 136], 'question.': [29], 'Here,': [30], 'we': [31, 157], 'critically': [32], 'examine': [33], 'two': [34], 'such': [35], 'clades:': [36], 'animals': [38], '(with': [39, 48], 'a': [40, 49, 57, 118, 144], 'focus': [41, 50], 'on': [42, 51], 'bilaterians)': [44], 'and': [45, 151, 156], 'mammals': [47], 'placentals).': [53], 'Each': [54], 'example': [55], 'displays': [56], 'set': [58], 'characteristic': [60], 'pathologies': [61], 'which,': [62], 'although': [63], 'much': [64], 'commented': [65], 'on,': [66], 'are': [67, 165], 'rarely': [68], 'corrected': [69], 'for.': [70], 'We': [71], 'conclude': [72], 'that': [73, 122], 'neither': [75], 'case': [76, 111], 'does': [77], 'molecular': [79, 148, 171], 'analysis': [81], 'provide': [82, 143], 'any': [83], 'evidence': [84], 'for': [85], 'an': [86], 'deeper': [91], 'what': [93], 'is': [94], 'suggested': [95], 'by': [96], 'fossil': [98, 140], 'record.': [99], 'In': [100], 'addition,': [101], 'both': [102], 'these': [103, 137, 163], 'have': [105, 158], 'other': [106], 'features': [107], '(including,': [108], 'placental': [114], 'mammals,': [115], 'proximity': [116], 'to': [117, 125, 161], 'large': [119], 'mass': [120], 'extinction)': [121], 'allow': [123], 'us': [124], 'generate': [126], 'precise': [127], 'expectations': [128], 'their': [133], 'origins.': [134], 'Thus,': [135], 'instances,': [138], 'record': [141], 'can': [142], 'powerful': [145], 'test': [146], 'methodology,': [150], 'why': [152], 'it': [153], 'goes': [154], 'astray,': [155], 'every': [159], 'reason': [160], 'think': [162], 'problems': [164], 'general.': [166], '[Cambrian': [167], 'explosion;': [168], 'mammalian': [169], 'evolution;': [170], 'clocks.]': [172]}, 'cited_by_api_url': 'https://api.openalex.org/works?filter=cites:W4386590326', 'counts_by_year': [{'year': 2024, 'cited_by_count': 11}, {'year': 2023, 'cited_by_count': 1}], 'updated_date': '2024-12-11T08:21:28.926015', 'created_date': '2023-09-11'}