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[50, 2340], 'Rui': [51, 157, 283], 'Liu,': [52, 2338], 'Yuhong': [53, 179, 285], 'Yang,': [54, 2348], 'Bingyan': [55, 201, 287], 'Xie,': [56, 2310, 2354, 2439], 'and': [57, 70, 77, 101, 108, 117, 139, 161, 183, 210, 219, 237, 247, 256, 274, 303, 310, 320, 388, 400, 416, 432, 459, 477, 491, 514, 522, 537, 580, 608, 637, 649, 664, 672, 678, 692, 724, 753, 800, 828, 837, 865, 872, 885, 921, 959, 1039, 1069, 1089, 1101, 1120, 1153, 1156, 1194, 1212, 1250, 1264, 1306, 1327, 1336, 1353, 1360, 1363, 1374, 1381, 1388, 1439, 1487, 1493, 1568, 1634, 1644, 1664, 1710, 1769, 1799, 1825, 1844, 1866, 1875, 1896, 1904, 1927, 1936, 1952, 1984, 1999, 2003, 2026, 2034, 2056, 2099, 2141, 2165, 2189, 2214, 2226, 2246, 2273, 2309, 2353, 2366, 2399, 2412, 2438, 2452, 2475, 2511, 2517, 2618], 'Zhenchuan': [58, 238, 290], 'MaoXueliang': [59], 'Tianhttps://orcid.org/0000-0001-5774-4631Henan': [60], 'Engineering': [61, 92, 294], 'Research': [62, 93, 295, 2496, 2507, 2603, 2614], 'Center': [63, 94, 296, 1540], 'Biological': [65, 96, 298], 'Pesticide': [66, 97, 299], '&': [67, 98, 300], 'Fertilizer': [68, 99, 301], 'Development': [69, 100, 302], 'Synergistic': [71, 102, 304], 'Application,': [72, 103, 305], 'Henan': [73, 104, 306, 2502, 2526, 2609, 2631], 'Institute': [74, 105, 307], 'Science': [76, 107, 309, 2489, 2596], 'Technology,': [78, 109, 311], 'Xinxiang': [79, 110, 312, 2515], '453003,': [80, 111, 313], 'P.': [81, 112, 126, 148, 170, 192, 228, 265, 314, 329, 1708, 2167], 'R.': [82, 113, 127, 149, 171, 193, 229, 266, 315, 330, 1820, 2097, 2383, 2476], 'ChinaSearch': [83, 128, 150, 172, 194, 230, 267], 'for': [84, 129, 151, 173, 195, 231, 268, 704, 728, 797, 801, 1127, 1187, 1404, 1516, 1805, 2037], 'more': [85, 130, 152, 174, 196, 232, 269], 'papers': [86, 131, 153, 175, 197, 233, 270], 'by': [87, 132, 154, 176, 198, 234, 271, 613, 628, 746, 1149, 1163, 1198, 1231, 2117, 2317, 2372, 2485], 'this': [88, 133, 155, 177, 199, 235, 272, 374, 635], 'author,': [89, 134, 156, 178, 200, 236], 'SunHenan': [91], 'ChinaInstitute': [114], 'Vegetable': [116, 138, 160, 182, 218, 255, 319], 'Flowers,': [118, 140, 162, 184, 220, 257, 321], 'Chinese': [119, 141, 163, 185, 221, 258, 322], 'Academy': [120, 142, 164, 186, 222, 259, 323], 'Agricultural': [122, 144, 166, 188, 224, 261, 325], 'Sciences,': [123, 145, 167, 189, 225, 262, 326], 'Beijing': [124, 146, 168, 190, 226, 263, 327], '100193,': [125, 147, 169, 191, 227, 264, 328], 'LinInstitute': [136], 'LiuInstitute': [158], 'YangInstitute': [180], 'Xie†Corresponding': [202], 'authors:': [203, 240], 'Z.': [204, 241, 2433], 'Mao;': [205, 242], 'E-mail': [206, 213, 243, 250], 'Address:': [207, 214, 244, 251], '[email': [208, 215, 245, 252], 'protected],': [209, 246], 'B.': [211, 248, 1738, 1772, 1797, 1827, 1900, 2086, 2248, 2311, 2355, 2430, 2440], 'Xie;': [212, 249], 'protected]Institute': [216, 253], 'Mao†Corresponding': [239], 'authorAffiliationsAuthors': [273], 'Affiliations': [275], 'Xueliang': [276], 'Tian1': [277], 'Sun1': [279], '2': [280], 'Lin2': [282], 'Liu2': [284], 'Yang2': [286], 'Xie2': [288], '†': [289, 292], 'Mao2': [291], '1Henan': [293], 'China': [316, 331, 1535, 2492, 2505], '2Institute': [317], 'Published': [332], 'Online:8': [333], 'Apr': [334, 2570], '2022https://doi.org/10.1094/MPMI-11-21-0284-AAboutSectionsView': [335], 'articlePDFSupplemental': [336], 'ToolsAdd': [337], 'to': [338, 369, 385, 402, 572, 599, 605, 660, 736, 788, 933, 1093, 1135, 1347, 1378, 1407, 1475, 2409], 'favoritesDownload': [339], 'CitationsTrack': [340], 'Citations': [341], 'ShareShare': [342], 'onFacebookTwitterLinked': [343], 'InRedditEmailWechat': [344], 'View': [345], 'articleGenome': [346], 'AnnouncementSarocladium': [347], 'isolated': [350, 381, 446], 'from': [351, 382, 394, 447, 562, 713, 1075, 1123, 1576, 1780, 1909, 2150, 2323, 2406], 'tomato': [352, 577, 584, 1836, 2324], 'root': [353, 564, 578, 1832, 2325], 'galls,': [354], 'possesses': [355, 511, 568], 'antagonistic': [356, 375, 570], 'activity': [357, 539, 571], 'against': [358, 423, 506, 518, 547, 684, 1504, 2069, 2458], 'incognita.': [360, 1478, 1506, 2071, 2460], 'The': [361, 407, 439, 466, 554, 618, 793, 808, 851, 878, 1083, 1391, 1547, 2537, 2580], 'genome': [362, 631, 646, 689, 854, 879, 1037, 1059, 1457, 1480, 1509, 1548, 2373], 'S.': [364, 962, 978, 1459, 1491, 1524, 1527, 1600, 1630, 1801], 'TR': [366, 624, 677, 858, 957, 974, 1529], 'was': [367, 611, 625, 690, 695, 716, 769, 779, 795, 835, 838, 859, 906, 975, 1133, 1185, 1531, 2483], 'sequenced': [368, 691], 'find': [370], 'the': [371, 534, 563, 629, 638, 654, 669, 742, 766, 789, 900, 922, 930, 935, 946, 951, 956, 972, 985, 1025, 1029, 1035, 1058, 1073, 1097, 1102, 1116, 1124, 1130, 1157, 1177, 1323, 1341, 1350, 1367, 1379, 1398, 1409, 1413, 1456, 1484, 1498, 1520, 1534, 1542, 1554, 1577, 1910, 1960, 1991, 2001, 2318, 2445, 2486, 2518, 2547, 2589], 'basis': [372, 671, 1486], 'activity.Many': [376], 'biocontrol': [377, 504, 545, 1502, 1521, 2456], 'agents': [378], 'have': [379, 397, 503, 602, 652], 'been': [380, 398, 603, 1551], 'Acremonium': [383, 395, 408, 442, 501, 600, 1842, 1912, 2067, 2118, 2321, 2448], 'fungi': [384, 502, 1207], 'control': [386], 'animal': [387], 'plant': [389], 'pathogens.': [390], 'Several': [391], 'secondary': [392, 673, 1273, 1394, 1421, 1472, 1488, 1574], 'metabolites': [393, 1274, 1422, 1473, 1575], 'strains': [396, 964], 'identified': [399, 976, 1068, 1148, 1162, 1276], 'found': [401], 'exhibit': [403, 457], 'useful': [404], 'biological': [405, 1410], 'activities.': [406], 'sp.': [409, 940, 1913], 'strain': [410, 532, 557, 623, 676, 857, 958, 973, 1530], 'bcc': [411, 1914], '31806': [412], 'produces': [413], 'Acremoxanthones': [414, 1902], 'A': [415, 759, 903, 1932, 2031], 'B,': [417, 1445], 'which': [418, 485, 575, 980], 'are': [419, 2478], 'novel': [420, 1906, 2107, 2280], 'antibiotic': [421, 1907, 2359], 'polyketides': [422, 455, 1908, 2111], 'Gram-positive': [424], 'bacteria': [425], 'such': [426, 481], 'Staphylococcus': [428], 'aureus,': [429], 'Bacillus': [430], 'subtilis,': [431], 'Enterococcus': [433], 'hirae': [434], '(Isaka': [435], 'et': [436, 463, 495, 526, 551, 588, 592, 615, 845, 912, 926, 989, 1080, 1106, 1110, 1139, 1173, 1235, 1241, 1247, 1253, 1280], 'al.': [437, 464, 496, 527, 552, 589, 593, 616, 846, 913, 927, 990, 1081, 1107, 1111, 1140, 1174, 1236, 1242, 1248, 1254, 1281], '2009).': [438], 'endophytic': [440, 472, 560, 1463, 1957, 2123, 2319, 2446], 'fungus': [441, 467, 561, 694, 1464, 1499, 1911, 1958, 2066, 2320, 2363, 2447], 'camptosporum': [443, 2119], 'W.': [444, 2120, 2351], 'Gams': [445], 'Bursera': [448], 'simaruba': [449], 'can': [450, 470], 'synthesize': [451], 'six': [452], 'major': [453], 'heterodimeric': [454, 2110], 'that': [456, 955, 2174], 'antioomycete': [458], 'cytotoxic': [460], 'activities': [461, 1411], '(Meléndez-González': [462], '2015).': [465, 594], 'A.': [468, 509, 530, 555, 609, 621, 1750, 2018, 2028, 2083, 2094, 2217], 'implicatum': [469, 531, 556, 610, 622, 2068, 2322, 2449], 'form': [471], 'associations': [473], 'with': [474, 533, 811, 848, 863, 915, 929, 984, 1019, 1096, 1541, 2112, 2288, 2450], 'Brachiaria': [475, 1964, 1995], 'spp.': [476, 601], 'inhibit': [478], 'fungal': [479, 767, 1414, 1840, 2281], 'pathogens': [480], 'Drechslera': [483], 'spp.,': [484, 607], 'cause': [486], 'leaf': [487, 1969], 'spot': [488, 1970], 'disease': [489], '(Kelemu': [490], 'Takayama': [492], '1998;': [493], 'Kelemu': [494], '2001).': [497, 1141], 'In': [498, 1283], 'addition,': [499], 'some': [500, 596], 'ability': [505], 'root-knot': [507, 1808], 'nematodes.': [508], 'striatum': [510], 'both': [512, 1150], 'toxic': [513], 'egg': [515], 'parasitic': [516], 'properties': [517], 'M.': [519, 573, 685, 1477, 1505, 1592, 1636, 2080, 2091, 2101, 2190, 2275, 2402], '(Goswami': [521], 'Singh': [523], '2004;': [524], 'Goswami': [525], '2008).': [528], 'One': [529, 707], 'strong': [535], 'chitinolytic': [536], 'nematicidal': [538], 'showed': [540, 954], 'great': [541], 'potential': [542, 2062], 'agent': [546, 1503], '(Lin': [550], '2013).': [553], 'gall': [565, 579], 'tomato,': [567, 1466], 'incognita,': [574, 686], 'causes': [576], 'reduces': [581], 'yield': [582], 'in': [585, 634, 645, 899, 982, 1340, 1349, 1366, 1423, 1533, 1641, 1810, 1959, 2196, 2279, 2361], 'greenhouses': [586], '(Tian': [587], '2014;': [590], 'Yao': [591], 'Now,': [595], 'species': [597], 'belonged': [598], 'transferred': [604], 'renamed': [612], 'Giraldo': [614, 988], '(2015).': [617], 'taxonomy': [619], 'also': [626], 'reevaluated': [627], 'whole': [630, 688], 'phylogenetic': [632, 904, 952, 2040, 2222], 'analysis': [633, 890, 1137, 2223], 'study': [636, 1078], 'current': [639], 'name': [640], 'should': [641], 'be': [642], 'terricola.Advances': [644], 'sequencing,': [647], 'bioinformatics,': [648], 'analytical': [650], 'chemistry': [651, 1642], 'enabled': [653], 'discovery': [655, 1392], 'gene': [657, 1128, 1178, 1270, 1286, 1320, 1356, 1384, 1402, 1443, 1469, 1645, 2172, 2410], 'clusters': [658, 1271, 1287, 1309, 1357, 1385, 1396, 1470], 'related': [659, 938], 'metabolic': [661], 'products': [662], '(Bills': [663], 'Gloer': [665], '2016).': [666, 1082], 'To': [667, 1114], 'investigate': [668], 'molecular': [670, 1485], 'metabolism': [674, 1489], 'gain': [679], 'insight': [680], 'into': [681, 718, 755, 1483, 1519], 'its': [682, 687, 1440, 2005, 2455], 'antagonism': [683], 'analyzed.The': [693], 'cultured': [696, 725], 'on': [697, 731, 945, 1675, 1835, 1967, 2369], 'potato': [698, 721], 'dextrose': [699, 722], 'agar': [700], '(PDA)': [701], 'at': [702, 726, 1032, 1397, 1553], '25°C': [703, 727], '7': [705], 'days.': [706], 'small': [708, 1267], 'plug': [709], 'colonized': [711], 'media': [712], 'PDA': [714], 'plates': [715], 'put': [717], 'flasks': [719], 'broth': [723], '3': [729, 740], 'days': [730], 'orbital': [733], 'shaker': [734], 'set': [735, 1179], '100': [737], 'rpm.': [738], 'After': [739], 'days,': [741], 'mycelia': [743], 'were': [744, 1067, 1091, 1147, 1161, 1225, 1261, 1266, 1275, 1288], 'harvested': [745], 'gravity': [747], 'filtration': [748], 'through': [749, 1837], 'KenAG': [750], 'Milk': [751], 'Filters': [752], 'placed': [754], 'one': [756, 966, 1328, 1430], 'Lysing': [757], 'Matrix': [758], 'tube': [760], '(MP': [761], 'Biomedicals).': [762], 'For': [763], 'DNA': [764, 778, 794], 'isolation,': [765], 'tissue': [768, 774], 'disrupted': [770], 'using': [771, 781, 803, 840, 908, 1072, 1277, 2224, 2283], 'FastPrep-24': [773], 'homogenizer;': [775], 'then,': [776], 'total': [777, 852, 1036], 'extracted': [780], 'DNeasy': [783], 'Plant': [784, 2521, 2626], 'MiniKit': [785], '(Qiagen)': [786], 'according': [787], 'manufacturer’s': [790], 'standard': [791], 'protocols.': [792], 'used': [796, 1092, 1134], 'library': [798], 'construction': [799], 'sequencing': [802], 'Illumina': [804], 'HiSeq': [805], '2000': [806], 'technology.': [807], 'raw': [809], 'data': [810], 'average': [812], 'insert': [813], 'sizes': [814, 868], '180': [816], 'bp': [817, 823, 830], '(coverage': [818, 824, 831], 'approximately': [820, 826, 833, 860, 870], '100×),': [821], '800': [822], '85×),': [827], '5,000': [829], '31×)': [834], 'obtained': [836], 'assembled': [839], 'Allpaths-LG': [841], 'revision': [842], '42305': [843], '(Gnerre': [844], '2011)': [847], 'default': [849, 1103], 'parameters.': [850], 'nuclear': [853, 901], 'length': [855, 1027, 1038], '30.18': [861], 'Mb,': [862, 874], 'scaffold': [864], 'contig': [866, 1031], 'N50': [867, 1005, 1009], '3.48': [871], '0.39': [873], 'respectively': [875], '(Table': [876], '1).': [877], 'assembly': [880, 1549], 'consisted': [881], '17': [883], 'scaffolds': [884], '127': [886], 'contigs.': [887], 'Repeat': [888], 'Masker': [889], 'detected': [891], 'low': [893], 'percentage': [894], '(1.05%)': [895], 'repeat': [897], 'sequences': [898, 1017], 'genome.': [902], 'tree': [905, 953], 'constructed': [907], 'RAxML-NG': [909], 'v0.51b': [910], '(Kozlov': [911], '2019)': [914], 'bootstrap': [916], 'value': [917], '1,000': [919], 'replicates': [920], 'TREE-PUZZLE': [923], 'v5.2': [924], '(Schmidt': [925], '2002)': [928], 'Dayhoff': [931], 'model': [932], 'identify': [934], 'most': [936], 'closely': [937], '(Supplementary': [941, 968, 1064, 1310], 'Figure': [942, 969], 'S1A).': [943], 'Based': [944], 'internal': [947], 'transcribed': [948], 'spacer': [949], 'sequences,': [950], 'three': [960], 'other': [961, 1158], 'formed': [965], 'clade': [967], 'S1B).': [970], 'Hence,': [971], 'terricola,': [979], 'is': [981, 2540, 2582], 'line': [983], 'results': [986], '(2015).Table': [991], '1.': [992, 1046, 1417], 'Genome': [993, 1047, 2291], 'summary': [994, 1048], 'statistics': [995, 1049], 'TRParametersaValueSize': [999], '(bp)30,180,565GC': [1000], 'content': [1001], '(%)54.0Number': [1002], 'scaffolds17Scaffold': [1004], '(bp)3,477,858Number': [1006], 'contigs127Contig': [1008], '(bp)389,533Number': [1010], 'protein-coding': [1012, 1062], 'genes12,033Number': [1013], 'transfer': [1015], 'RNAs89Repeat': [1016], '(%)1.05Proteins': [1018], 'functional': [1020], 'assignments68.4Complete': [1021], 'BUSCOs': [1022], '(%)96.2aN50': [1023], '=': [1024, 1041], 'sequence': [1026, 1510, 1783], 'shortest': [1030], '50%': [1033], 'BUSCO': [1040, 2404], 'benchmarking': [1042], 'universal': [1043, 1167], 'single-copy': [1044, 1168], 'orthologs.Table': [1045], 'TRView': [1053], 'image': [1055], 'HTML': [1056], 'From': [1057], 'sequence,': [1060], '12,033': [1061], 'genes': [1063, 1095, 1196, 1332, 1339, 1348, 1365, 1371], 'Table': [1065, 1311], 'S1)': [1066], 'functionally': [1070], 'annotated': [1071, 1197], 'methods': [1074], 'previous': [1077], '(Wang': [1079], 'ab': [1084, 2285], 'initio': [1085, 2252, 2286], 'programs': [1086], 'Augustus': [1088, 1151], 'GeneMark-ES': [1090, 1154], 'predict': [1094], 'parameter': [1098], '“–species=Fusarium_graminearum”': [1100], 'parameters': [1104], '(Stanke': [1105], '2006;': [1108], 'Ter-Hovhannisyan': [1109], '2008),': [1112], 'respectively.': [1113, 1219, 1390], 'integrate': [1115], 'transcription': [1117], 'start': [1118], 'sites': [1119], 'homologous': [1121, 1318, 1441], 'proteins': [1122, 1224, 1263, 1673], 'Swiss-Prot': [1125, 1213], 'database': [1126], 'prediction,': [1129], 'Eugene': [1131], 'program': [1132], 'perform': [1136], '(Schiex': [1138], 'Among': [1142, 1256, 1313], 'these': [1143, 1257, 1314], 'genes,': [1144, 1190], '9,280': [1145], '(77.12%)': [1146], 'v2.7': [1152], 'v2.3f': [1155], '2,753': [1159], '(22.88%)': [1160], 'EuGene': [1164], 'v4.1.': [1165], 'Benchmarking': [1166], 'orthologs': [1169], '(BUSCO': [1170], 'v3)': [1171], '(Waterhouse': [1172], '2018)': [1175], 'determined': [1176], 'completeness': [1180], '96.2%.': [1182], 'Functional': [1183], 'annotation': [1184], 'successful': [1186], '8,227': [1188], '(68.37%)': [1189], 'including': [1191, 1290, 1322], '7,378,': [1192], '7,644,': [1193], '3,927': [1195], 'Pfam': [1199], 'domains': [1200], '(E-value': [1201, 1208, 1215], 'cutoff': [1202, 1209, 1216], '1e−5),': [1204], 'NCBI': [1205, 1555], 'refseq': [1206], '1e−50),': [1211, 1218], 'databases': [1214], 'Of': [1220], 'these,': [1221], '1,411': [1222], 'secreted': [1223, 1258, 1268], 'identified,': [1226], 'containing': [1227, 1330, 1369], 'signal': [1228, 1873, 1937, 2148], 'peptides': [1229, 1874, 2149], 'supported': [1230], 'SignalP': [1232, 2145], 'v4.0': [1233], '(Petersen': [1234], '2011),': [1237], 'TargetP': [1238], 'v1.1': [1239], '(Emanuelsson': [1240], '2000),': [1243], 'Phobious': [1244], 'v101': [1245], '(Käll': [1246], '2004),': [1249], 'Predisi': [1251], '(Hiller': [1252], '2004).': [1255], 'proteins,': [1259], '117': [1260], 'cysteine-rich': [1262], '547': [1265], 'proteins.The': [1269], 'antiSMASH': [1278, 1639], '(Blin': [1279], '2017).': [1282], 'total,': [1284], '33': [1285], 'found,': [1289], '10': [1291], 'nonribosomal': [1292, 1433], 'peptide': [1293, 1434, 1938], 'synthetase': 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[1415], 'products.Fig.': [1416], 'Gene': [1418, 2277], 'TR.': [1426], 'A,': [1427], 'Display': [1428], '(PKS-NRPS)': [1436], 'clusters.': [1444], 'Domains': [1446], 'LIA77_09838': [1448], '(the': [1449], 'gene).Download': [1452], 'PowerPointIn': [1454], 'summary,': [1455], 'contains': [1467], 'multiple': [1468], 'predicted': [1474], 'suppress': [1476], 'This': [1479, 1507, 2481, 2539], 'provides': [1481], 'insights': [1482], 'supports': [1494], 'further': [1495], 'development': [1496], 'draft': [1508, 1775], 'will': [1511], 'provide': [1512], 'valuable': [1514], 'foundation': [1515], 'research': [1518], 'mechanisms': [1522], 'terricola.Data': [1525], 'AvailabilityThe': [1526], 'deposited': [1532, 1552], 'General': [1536], 'Microbiological': [1537], 'Culture': [1538], 'Collection': [1539], 'accession': [1543, 1557], 'number': [1544, 1558], 'CGMCC': [1545], 'NO.8300.': [1546], 'has': [1550], 'under': [1556, 2546, 2588], 'JAJEVK000000000.1.The': [1559], 'author(s)': [1560, 2528, 2635], 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'K.,': [1588, 1798, 1821, 1859, 2211], 'Wolf,': [1589], 'T.,': [1590, 1633, 1741, 2023, 2098, 2162], 'Chevrette,': [1591], 'Lu,': [1594], 'X.,': [1595, 2052, 2300, 2308], 'Schwalen,': [1596], 'C.': [1597], 'J.,': [1598, 1693, 1704, 1733, 1739, 1818, 2081, 2347], 'Kautsar,': [1599], 'A.,': [1601, 1622, 1691, 1696, 1763, 1861, 1926, 2164, 2209, 2243, 2269, 2389], 'Suarez': [1602], 'Duran,': [1603], 'H.': [1604, 1613, 1637, 2143, 2208], 'de': [1606, 1699], 'Los': [1607], 'Santos,': [1608], 'E.': [1609, 1767, 1899, 1929, 2397, 2401], 'L.': [1610, 1930, 2059, 2102], 'C.,': [1611, 1706, 1765, 2078, 2092, 2434], 'Kim,': [1612], 'U.,': [1614], 'Nave,': [1615], 'M.,': [1616, 1751, 1755, 1863, 1889, 2019, 2213, 2237, 2384, 2386, 2391, 2431], 'Dickschat,': [1617], 'S.,': [1619, 1663, 1702, 1726, 1748, 1768, 1891, 1895, 1951, 1977, 2050, 2089, 2137, 2245], 'Mitchell,': [1620], 'D.': [1621, 1695, 1771, 1868], 'Shelest,': [1623], 'E.,': [1624, 1628, 2087, 2095, 2343], 'Breitling,': [1625], 'R.,': [1626, 1757, 1761, 1865, 2341, 2425], 'Takano,': [1627], 'Lee,': [1629], 'Y.,': [1631, 2302, 2349], 'Weber,': [1632], 'Medema,': [1635], '2017.': [1638], '4.0—Improvements': [1640], 'prediction': [1643, 1939, 2253, 2278, 2411], 'boundary': [1647], 'identification.': [1648], 'Nucleic': [1649, 1879, 2257], 'Acids': [1650, 1880, 2258], 'Res.': [1651, 1881, 2259, 2292], '45:W36-W41.': [1652], 'https://doi.org/10.1093/nar/gkx319': [1653], 'Medline,': [1655, 1687, 1722, 1793, 1855, 1885, 1947, 2014, 2046, 2130, 2158, 2233, 2263, 2296, 2379, 2420, 2468], 'ScholarEmanuelsson,': [1658], 'O.,': [1659, 2239, 2272], 'Nielsen,': [1660, 2142], 'H.,': [1661, 1698, 2437], 'Brunak,': [1662, 2136], 'von': [1665, 2138, 2215], 'Heijne,': [1666, 2139], 'G.': [1667, 1701, 2436], '2000.': [1668, 2186], 'Predicting': [1669], 'subcellular': [1670], 'localization': [1671], 'based': [1674], 'their': [1676, 1876, 2367], 'N-terminal': [1677], 'amino': [1678], 'acid': [1679], 'sequence.': [1680], 'Mol.': [1682, 1942, 2414], 'Biol.': [1683, 1943, 2415], '300:1005-1016.': [1684], 'https://doi.org/10.1006/jmbi.2000.3903': [1685], 'ScholarGiraldo,': [1690], 'Gené,': [1692], 'Sutton,': [1694], 'Madrid,': [1697], 'Hoog,': [1700], 'Cano,': [1703], 'Decock,': [1705], 'Crous,': [1707], 'W.,': [1709], 'Guarro,': [1711], '2015.': [1713, 2103, 2442], 'Phylogeny': [1714], '(Hypocreales).': [1717], 'Persoonia': [1718], '34:10-24.': [1719], 'https://doi.org/10.3767/003158515X685364': [1720], 'ScholarGnerre,': [1725], 'Maccallum,': [1727], 'I.,': [1728, 2241], 'Przybylski,': [1729], 'D.,': [1730, 1753, 2021], 'Ribeiro,': [1731], 'F.': [1732, 2058, 2191, 2388], 'Burton,': [1734], 'N.,': [1736, 2135], 'Walker,': [1737], 'Sharpe,': [1740], 'Hall,': [1742], 'Shea,': [1744], 'T.': [1745, 2134, 2473], 'P.,': [1746, 1824, 1893, 2393], 'Sykes,': [1747], 'Berlin,': [1749, 2202], 'Aird,': [1752], 'Costello,': [1754], 'Daza,': [1756], 'Williams,': [1758], 'L.,': [1759, 1924, 2084, 2428], 'Nicol,': [1760], 'Gnirke,': [1762], 'Nusbaum,': [1764], 'Lander,': [1766], 'Jaffe,': [1770], '2011.': [1773, 2144], 'High-quality': [1774], 'assemblies': [1776], 'mammalian': [1778], 'genomes': [1779, 2282], 'massively': [1781], 'parallel': [1782, 2227], 'data.': [1784], 'Proc.': [1785], 'Natl.': [1786], 'Acad.': [1787], 'Sci.': [1788, 1814, 1849], 'U.S.A.': [1789], '108:1513-1518.': [1790], 'https://doi.org/10.1073/pnas.1017351108': [1791], 'ScholarGoswami,': [1796, 1817], 'Singh,': [1800], '2004.': [1802, 1869, 1931], 'Fungal': [1803], 'bioagents': [1804], 'management': [1806], 'nematode': [1809, 1834], 'tomato.': [1811], 'Pestic.': [1813], '16:9-12.': [1815], 'Pandey,': [1819], 'Tewari,': [1822], 'Goswami,': [1826], 'K.': [1828], '2008.': [1829, 2276], 'Management': [1830], 'knot': [1833], 'application': [1838], 'antagonists,': [1841], 'strictum': [1843], 'Trichoderma': [1845], 'harzianum.': [1846], 'Environ.': [1848], 'Health': [1850], 'B': [1851], '43:237-240.': [1852], 'https://doi.org/10.1080/03601230701771164': [1853], 'ScholarHiller,': [1858], 'Grote,': [1860], 'Scheer,': [1862], 'Münch,': [1864], 'Jahn,': [1867], 'PrediSi:': [1870], 'Prediction': [1871], 'cleavage': [1877], 'positions.': [1878], '32:W375-W379.': [1882], 'https://doi.org/10.1093/nar/gkh378': [1883], 'ScholarIsaka,': [1888], 'Palasarn,': [1890], 'Auncharoen,': [1892], 'Komwijit,': [1894], 'Gareth': [1897], 'Jones,': [1898], '2009.': [1901], 'b,': [1905], '31806.': [1915], 'Tetrahedron': [1916], 'Lett.': [1917], '50:284-287.': [1918], 'https://doi.org/10.1016/j.tetlet.2008.10.146': [1919], 'ScholarKäll,': [1923], 'Krogh,': [1925], 'Sonnhammer,': [1928], 'combined': [1933], 'transmembrane': [1934, 2151], 'topology': [1935], 'method.': [1940], '338:1027-1036.': [1944], 'https://doi.org/10.1016/j.jmb.2004.03.016': [1945], 'ScholarKelemu,': [1950, 1976], 'Takayama,': [1953, 1985], 'Y.': [1954, 1986, 2271, 2424, 2441], '1998.': [1955], 'An': [1956, 1988, 2170], 'tropical': [1961, 1992], 'forage': [1962, 1993], 'grass': [1963, 1994], 'brizantha:': [1965, 1996], 'Effect': [1966], 'disease.': [1971], '(Abstr.)': [1972], 'Phytopathology': [1973], '88:S46.': [1974], 'White,': [1978], 'F.,': [1980, 1983], 'Jr.,': [1981], 'Muñoz,': [1982], '2001.': [1987, 2168], 'endophyte': [1989], 'Isolating,': [1997], 'identifying,': [1998], 'characterizing': [2000], 'fungus,': [2002], 'determining': [2004], 'antimycotic': [2006], 'properties.': [2007], 'Can.': [2008], '47:55-62.': [2011], 'https://doi.org/10.1139/w00-127': [2012], 'ScholarKozlov,': [2017], 'Darriba,': [2020], 'Flouri,': [2022], 'Morel,': [2024], 'B.,': [2025, 2352], 'Stamatakis,': [2027], '2019.': [2029], 'RAxML-NG:': [2030], 'fast,': [2032], 'scalable': [2033], 'user-friendly': [2035], 'tool': [2036], 'maximum': [2038], 'likelihood': [2039, 2221], 'inference.': [2041], 'Bioinformatics': [2042, 2229], '35:4453-4455.': [2043], 'https://doi.org/10.1093/bioinformatics/btz305': [2044], 'ScholarLin,': [2049], 'Wu,': [2051], 'Cao,': [2053], 'Z.,': [2055, 2306, 2339, 2345], 'Wang,': [2057, 2307], '2013.': [2060], 'chitinase-producing': [2064], 'nematophagous': [2065], 'Acta': [2072], 'Phytopathol.': [2073], 'Sin.': [2074], '43:509-517.': [2075], 'ScholarMeléndez-González,': [2077], 'Murià-González,': [2079], 'Anaya,': [2082], 'Hernández-Bautista,': [2085], 'Hernández-Ortega,': [2088], 'González,': [2090], 'Glenn,': [2093], 'Hanlin,': [2096], 'Macías-Rubalcava,': [2100], 'Acremoxanthone': [2104], 'E,': [2105], 'member': [2108], 'bicyclo[3.2.2]nonene': [2114], 'ring,': [2115], 'produced': [2116], 'GAMS': [2121], '(Clavicipitaceae)': [2122], 'fungus.': [2124], 'Chem.': [2125], 'Biodivers.': [2126], '12:133-147.': [2127], 'https://doi.org/10.1002/cbdv.201300370': [2128], 'ScholarPetersen,': [2133], '4.0:': [2146], 'Discriminating': [2147], 'regions.': [2152], 'Nat.': [2153], 'Methods': [2154], '8:785-786.': [2155], 'https://doi.org/10.1038/nmeth.1701': [2156], 'ScholarSchiex,': [2161], 'Moisan,': [2163], 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'alternative': [2255], 'transcripts.': [2256], '34:W435-W439.': [2260], 'https://doi.org/10.1093/nar/gkl200': [2261], 'ScholarTer-Hovhannisyan,': [2266], 'V.,': [2267, 2398], 'Lomsadze,': [2268], 'Chernoff,': [2270], 'Borodovsky,': [2274], 'algorithm': [2287], 'unsupervised': [2289], 'training.': [2290], '18:1979-1990.': [2293], 'https://doi.org/10.1101/gr.081612.108': [2294], 'ScholarTian,': [2299], 'Yao,': [2301], 'Chen,': [2303, 2435], 'Mao,': [2305, 2344, 2432], '2014.': [2312], 'Suppression': [2313], 'galls.': [2326], 'Int.': [2327], 'Pest': [2329], 'Manage.': [2330], '60:239-245.': [2331], 'https://doi.org/10.1080/09670874.2014.958604': [2332], 'ScholarWang,': [2336], 'Li,': [2342], 'Ling,': [2346], 'Yin,': [2350], 'Biosynthesis': [2357], 'leucinostatins': [2360], 'bio-control': [2362], 'Purpureocillium': [2364], 'lilacinum': [2365], 'inhibition': [2368], 'Phytophthora': [2370], 'revealed': [2371], 'mining.': [2374], 'PLoS': [2375], 'Pathog.': [2376], '12:e1005685.': [2377], 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