Proteomics-Based Insights Into the SARS-CoV-2–Mediated COVID-19 Pandemic: A Review of the First Year of Research

Name: Work Video:
Duration: 3 min 30 s
Jeremy L. Praissman; Lance Wells
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2586, 2632, 2683, 2770, 2784, 2787, 2800, 2880, 2967, 3086, 3174, 3259, 3362, 3414, 3524, 3560, 3588, 3601, 3612, 3619, 3625, 3650, 3658, 3663, 3674, 3681, 3687, 3719, 3731, 3737, 3750, 3762, 3764, 3771, 3783, 3786, 3870, 3904, 4027, 4107, 4224, 4235, 4263, 4368], 'its': [10, 1941, 2537, 3113, 3533], 'proteome': [11, 1699, 1817, 1899], 'and': [12, 17, 19, 32, 72, 98, 104, 118, 156, 177, 202, 222, 227, 242, 245, 290, 316, 322, 336, 374, 395, 420, 440, 445, 460, 463, 591, 759, 781, 914, 972, 982, 1017, 1045, 1055, 1203, 1246, 1268, 1288, 1370, 1457, 1461, 1476, 1523, 1698, 1786, 1816, 1862, 1881, 1894, 1940, 2053, 2105, 2107, 2153, 2165, 2183, 2188, 2296, 2303, 2372, 2374, 2415, 2417, 2472, 2474, 2536, 2581, 2768, 2773, 2796, 2820, 2943, 2969, 2972, 2975, 2979, 3041, 3090, 3112, 3230, 3269, 3374, 3467, 3483, 3508, 3532, 3562, 3596, 3598, 3603, 3606, 3630, 3632, 3635, 3661, 3667, 3684, 3734, 3766, 3769, 3778, 3851, 3857, 3902, 3909, 3938, 3974, 4025, 4032, 4100, 4122, 4134, 4174, 4239, 4274, 4294, 4366], 'host': [13, 220, 438, 1282, 1912, 1930, 1945, 2293, 2298, 2404, 2685, 2741, 2771, 2970, 3189, 3539, 3563, 3589, 3626, 3651, 3940], 'proteomes': [14, 3624], 'for': [15, 240, 458, 776, 979, 1002, 1020, 1237, 1368, 1447, 1858, 1916, 1934, 1949, 2228, 2438, 2687, 2744, 2825, 2873, 2884, 3026, 3035, 3045, 3182, 3192, 3233, 3310, 3470, 3689, 3741, 3753, 3824, 3862, 3906, 3960, 3965, 4029, 4075, 4109, 4116, 4120, 4125, 4138, 4232, 4270, 4291, 4327, 4370], 'transmissibility': [16], 'virulence.•Qualitative': [18], 'quantitative': [20, 191, 409, 3573, 3648, 4076], 'proteomic': [21, 185, 403], 'assay': [22, 4231, 4269], 'development': [23, 249, 467, 3756], 'underlies': [24], 'attempts': [25], 'to': [26, 38, 74, 94, 148, 161, 263, 292, 312, 366, 379, 481, 594, 770, 786, 1075, 1424, 1438, 1479, 1515, 1886, 1927, 2278, 2301, 2400, 2806, 2860, 2928, 3008, 3187, 4177], 'further': [27, 3550, 3690, 3858, 3950, 4139], 'understand': [28], 'virus.•Protein–protein': [30], 'interaction': 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3375, 3543], 'global': [86, 304, 2930, 3010], 'health': [87, 305, 2931, 3011], 'threat': [88, 306], 'posed': [89, 307], 'by': [90, 109, 308, 327, 1048, 1052, 1072, 1375, 1469, 1533, 1622, 2110, 2191, 2196, 2233, 2377, 2477, 2634, 3797, 3996], 'this': [91, 145, 165, 309, 363, 383, 1879, 2801, 3525, 3546, 3613, 3682, 3953], 'an': [95, 313, 2149, 2963, 3617, 3801], 'extremely': [96, 314], 'rapid': [97, 315, 4173], 'robust': [99, 317], 'mobilization': [100, 318], 'scientific': [103, 321], 'medical': [105, 323], 'communities': [106, 324], 'as': [107, 325, 512, 753, 783, 785, 1037, 1040, 1252, 1943, 2317, 2338, 2423], 'evidenced': [108, 326], 'publication': [111, 132, 329, 350, 1011], 'more': [113, 150, 159, 331, 368, 377, 757, 1439, 4132], 'than': [114, 151, 332, 369], '10,000': [115, 333], 'peer-reviewed': [116, 153, 170, 334, 371, 388], 'articles': [117, 171, 335, 389, 2329, 4128], 'thousands': [119, 337], 'preprints': [121, 160, 339, 378], 'first': [124, 342, 3522], 'year': [125, 343], 'alone.': [129, 347], 'With': [130, 348], 'initial': [135, 353, 1014, 1432, 2305], 'genome': [136, 354, 581, 745, 1006, 1015, 1893, 2813], 'sequence': [137, 355, 762, 1073], 'SARS-CoV-2,': [139, 357, 2788], 'community': [142, 360, 2809], 'immediately': [143, 361], 'joined': [144, 362], 'effort': [146, 364], 'publishing,': [147, 365], 'date,': [149, 367], '100': [152, 370], 'submitting': [157, 375], 'many': [158, 376, 2761], 'preprint': [162, 380], 'servers.': [163, 381], 'review,': [166, 384, 3614], 'we': [167, 256, 385, 474, 3527, 3615], 'focus': [168, 386, 3528], 'published': [172, 390, 3678, 3723, 4131], 'proteome,': [175, 393], 'glycoproteome,': [176, 394], 'glycome': [178, 396], 'SARS-CoV-2.': [180, 398], 'At': [181, 212, 399, 430], 'basic': [183, 401, 3557, 3728], 'level,': [184, 216, 402, 434], 'provide': [187, 264, 405, 482, 1430, 3616], 'aspects': [192, 410], 'viral': [194, 412, 1049, 1254, 3561, 3579, 3602, 3844, 3929, 3961], 'infection': [195, 413, 2323, 2439, 2585, 2689], 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3170, 3242, 3277, 3322, 3372, 3422, 3478, 3518, 3715, 3924, 4047, 4095, 4190, 4248, 4285], 'Scholar).': [579, 742, 997, 1227, 1415, 1496, 1726, 2128, 2287, 2395, 2759, 3022, 3101, 3171, 3423, 3479, 3519, 3716], 'then': [584, 1046], 'unknown': [585], 'etiological': [586], 'agent': [587], 'was': [588, 751, 1007, 1925, 1951, 2315, 3677], 'sequenced': [590], 'made': [592], 'available': [593, 2835, 3029, 3109, 3488, 4052], 'researchers': [596, 1907], 'January': [599], '(2Wu': [600, 790, 1079], 'F.': [601, 672, 791, 964, 1080, 2248, 2618, 3068, 3814, 4317], 'S.': [603, 712, 793, 850, 1082, 1139, 1307, 1543, 1559, 1561, 1677, 1739, 1755, 1757, 1795, 2078, 2084, 2098, 2175, 2181, 2268, 2345, 2351, 2365, 2445, 2451, 2465, 2579, 2600, 2608, 2624, 2641, 2660, 2664, 3070, 3134, 3136, 3203, 3217, 3295, 3299, 3301, 3347, 3407, 3463, 4126, 4156, 4206, 4222], 'B.': [605, 658, 664, 795, 886, 948, 956, 1084, 1175, 1380, 1961, 1971, 2260, 3225, 3351, 3495, 3497, 3898, 4021, 4061, 4069, 4362], 'Chen': [606, 796, 1085, 1360, 1974, 1976, 2512, 2520, 2522, 2726], 'Y.M.': [607, 797, 1086], 'Song': [610, 659, 800, 953, 1089], 'Z.G.': [611, 801, 1090], 'Tao': [614, 804, 1093], 'Z.W.': [615, 805, 1094], 'Tian': [616, 806, 1095], 'J.H.': [617, 807, 1096], 'Pei': [618, 808, 1097], 'Y.Y.': [619, 809, 1098], 'Yuan': [620, 711, 810, 849, 1099, 1138, 1306], 'M.L.': [621, 811, 1100], 'Y.L.': [623, 813, 1102], 'Dai': [624, 814, 1103], 'F.H.': [625, 815, 1104], 'Liu': [626, 816, 1105, 1340, 2498, 2564], 'Q.M.': [629, 819, 1108], 'al.A': [631, 680, 821, 1110, 1985, 3359, 4172], 'new': [632, 822, 1111, 1991], 'associated': [634, 824, 1113, 1988], 'human': [636, 826, 1115, 2235, 2587, 2691, 3364, 3416, 3594], 'China.Nature.': [640, 830, 1119], '579:': [642, 832, 1121, 1998], '265-269Crossref': [643, 833, 1122], '(6480)': [646, 836, 1125], 'Scholar,': [648, 700, 838, 880, 938, 1127, 1169, 1337, 1388, 1579, 1609, 1632, 1671, 2004, 2038, 2072, 2213, 2244, 2495, 2550, 2598, 2650, 2705, 4191, 4249, 4340], '3Zhu': [649], 'N.': [650, 958, 1565, 1761, 2008, 2080, 2256, 2347, 2447, 2602, 2612, 2626, 3066, 3146, 3441, 4216], 'D.': [652, 676, 1545, 1553, 1581, 1679, 1741, 1749, 1797, 2006, 2050, 2505, 3253, 3333, 3808, 4311], 'Yang': [657, 947, 1342, 1584, 1956], 'Huang': [663, 885, 955, 1174, 1972], 'Shi': [665], 'Lu': [667, 2667], 'R.': [668, 940, 2215, 2264, 2511, 2552, 2919, 2999, 3050, 3339, 3345, 3437, 3439, 3443, 4144, 4146, 4195, 4202, 4253], 'Niu': [669, 891, 945, 1180], 'P.': [670, 892, 946, 1181, 1345, 1955, 2503, 2678, 2913, 2993, 3197, 3213, 3353, 3355, 3389, 4142, 4166, 4214], 'Zhan': [671, 963], 'Ma': [673, 961], 'pneumonia': [686, 729, 867, 1156, 1324, 1986], 'China,': [688], '2019.N.': [689], 'Engl.': [690], 'Med.': [692, 1624, 1718, 1836], '382:': [694], '727-733Crossref': [695], '(16226)': [698], '4Chan': [701, 839, 1128], 'J.F.': [702, 840, 1129, 1297], 'Kok': [703, 841, 1130, 1298], 'K.H.': [704, 842, 1131, 1299], 'Zhu': [705, 843, 895, 957, 1132, 1184, 1300, 1968], 'Chu': [707, 845, 1134, 1302], 'H.': [708, 846, 950, 954, 1135, 1303, 1363, 1549, 1551, 1591, 1745, 1747, 1981, 2076, 2173, 2343, 2443, 2616, 2676, 3221, 3223, 4152, 4168], 'To': [709, 847, 1136, 1304, 1869], 'K.K.': [710, 848, 1137, 1305], 'Yuen': [713, 851, 1140, 1308], 'K.Y.': [714, 852, 1141, 1309], 'Genomic': [715, 853, 1142, 1310], 'characterization': [716, 854, 1143, 1311, 3662], 'human-pathogenic': [721, 859, 1148, 1316], 'isolated': [723, 861, 1150, 1318], 'atypical': [728, 866, 1155, 1323], 'after': [730, 868, 1010, 1157, 1325], 'visiting': [731, 869, 1158, 1326], 'Wuhan.Emerg.': [732, 870, 1159, 1327], 'Microbes': [733, 871, 1160, 1328], 'Infect.': [734, 872, 1161, 1329], '9:': [736, 874, 1163, 1331], '221-236Crossref': [737, 875, 1164, 1332], '(1847)': [740, 878, 1167, 1335], 'SARS-CoV-2': [744, 999, 1369, 1595, 1652, 1701, 1819, 1902, 1950, 2057, 2099, 2232, 2322, 2366, 2466, 2532, 2584, 2633, 2688, 2745, 2826, 2968, 3639, 3675, 3822, 3907, 4030, 4179, 4236, 4292, 4325, 4371], 'reported': [746, 1776, 1845, 3776, 3796, 4296], '(29,903': [747], 'bases,': [748], 'single-stranded': [749], 'RNA)': [750], 'annotated': [752, 1029], 'encoding': [754], '26': [755], 'proteins': [758, 1030, 1035, 1054, 1068, 1230, 1259, 1275, 1392, 1467, 1914, 2418, 2774, 2971, 3845, 3962], 'has': [760, 3793], 'high': [761], 'similarity': [763], '(~80%': [764], 'identity': [765, 1942, 2332], 'at': [766, 1058, 2161, 4053, 4298], 'nucleotide': [768], 'level)': [769], 'extensively': [772], 'studied': [773, 1077], 'SARS-CoV-1': [774], 'responsible': [775], 'SARS': [777], 'outbreaks': [778], '2002': [780], '2003': [782], 'well': [784, 1251], 'multiple': [787], 'animal': [788], 'coronaviruses': [789, 1078, 1292], '5Wu': [881, 1170], 'A.': [882, 1171, 1541, 1557, 1636, 1640, 1737, 1753, 2046, 2092, 2171, 2359, 2459, 2642, 3060, 3074, 3120, 3124, 3207, 3391, 3399, 3894, 4017, 4162, 4259, 4358], 'Peng': [883, 1172], 'Ding': [887, 1176, 2578], 'Meng': [893, 1182, 3883, 4006, 4347], 'Sheng': [901, 1190], 'Quan': [903, 1192], 'Tan': [907, 1196], 'al.Genome': [912, 1201], 'composition': [913, 1202], 'divergence': [915, 1204], '(2019-nCoV)': [920, 1209], 'originating': [921, 1210], 'China.Cell': [923, 1212], 'Host': [924, 1213], 'Microbe.': [925, 1214], '27:': [927, 1216], '325-328Abstract': [928, 1217], '(1451)': [936, 1225], '6Lu': [939], 'Bi': [959], 'al.Genomic': [970], 'characterisation': [971], 'epidemiology': [973], 'coronavirus:': [977], 'Implications': [978], 'origins': [981], 'receptor': [983, 1933, 1948, 2337, 3541], 'binding.Lancet.': [984], '565-574Abstract': [987], '(7224)': [995], 'National': [1000, 2871], 'Center': [1001, 2872], 'Biotechnology': [1003, 2874], 'Information': [1004, 2875], 'reference': [1005, 4140], 'released': [1008], 'shortly': [1009], 'sequences': [1016, 2824, 2830, 3774], 'contains': [1018, 2166], 'annotations': [1019, 1429, 1507, 1519], '28': [1021], 'encoded': [1022, 1067, 1260, 1295, 1466, 1524], 'proteins.': [1023], 'Starting': [1024], "5'-end,": [1027], 'consist': [1031], '16': [1033], 'nonstructural': [1034], '(denoted': [1036], 'nsp1–nsp16),': [1038], 'translated': [1039], 'components': [1041], 'large': [1043], 'polyproteins': [1044], 'separated': [1047], 'proteases,': [1050], 'followed': [1051], 'structural': [1053], 'additional': [1056, 3175], 'ORFs': [1057, 1779], "3'-end": [1060], '(Fig.': [1061], '1).': [1062], 'Putative': [1063], 'functions': [1064, 1235], 'were': [1069, 1904, 3963], 'inferred': [1071], 'homology': [1074], 'previously': [1076], 'nsp': [1229], 'include': [1231, 1261, 3747], 'two': [1232, 4114, 4300], 'protease': [1234, 2114, 2309, 2312, 2381, 2481], 'essential': [1236, 1446, 1656], 'polyprotein': [1238], 'processing—Mpro,': [1239], 'also': [1240, 1294, 1908, 3794, 3988], 'called': [1241], '3CLpro': [1242], '(3C-like': [1243], 'protease,': [1244, 1249], 'nsp5)': [1245], 'PLpro': [1247], '(papain-like': [1248], 'nsp3)—as': [1250], 'replication–transcription': [1255], 'complex': [1256], 'subunits.': [1257], 'Structural': [1258, 2226], 'spike': [1262, 1716, 1834, 2026, 2058, 2203, 2529, 4237], '(S),': [1263], 'envelope': [1264], '(E),': [1265], 'membrane': [1266, 2139], '(M),': [1267], 'nucleocapsid': [1269], '(N).': [1270], 'A': [1271, 2269, 3023, 3082, 3172, 3228, 3308, 3717, 4072], 'number': [1272, 3173, 3718], 'accessory': [1274], 'have': [1277, 1500, 1529, 2397, 2780, 2792, 3721, 4129], '(partially)': [1278], 'determined': [1279], 'roles': [1280], 'defense': [1283], 'interference,': [1284], 'intracellular': [1285], 'trafficking,': [1286], 'transcription,': [1287], 'replication': [1289], 'related': [1291, 2408], 'are': [1293, 1435, 1884, 2436, 2810, 2834, 3108, 3987, 4051], '(4Chan': [1296], '7Wu': [1338], 'Zhong': [1346], 'Q.': [1351, 2225, 2559], 'M.': [1355, 1359, 1613, 1642, 1648, 1685, 1803, 2074, 2246, 2254, 2258, 2341, 2441, 2606, 2620, 2622, 2628, 2662, 3078, 3132, 3142, 3201, 3205, 3247, 3251, 3291, 3381, 3453, 4160, 4170, 4218], 'Zheng': [1358], 'Analysis': [1364, 3283], 'therapeutic': [1366], 'targets': [1367], 'discovery': [1371], 'drugs': [1374], 'computational': [1376], 'methods.Acta': [1377], 'Pharm.': [1378], 'Sin.': [1379], '10:': [1382, 4280], '766-788Crossref': [1383], '(1400)': [1386], '8Yoshimoto': [1389], 'F.K.': [1390], 'coronavirus-2': [1398], '(SARS': [1399], 'CoV-2': [1400], 'n-COV19),': [1402], 'cause': [1404], 'COVID-19.Protein': [1406], '39:': [1409], '198-216Crossref': [1410], '(305)': [1413], 'context': [1418], 'proteomics,': [1420], 'it': [1421], 'important': [1423, 2789], 'note': [1425, 2805], 'such': [1427, 2422], 'homology-based': [1428, 1534], 'models': [1433, 3948], 'but': [1434], 'necessarily': [1436], 'subject': [1437], 'definitive': [1440, 1876], 'empirical': [1441], 'characterization.': [1442], 'This': [1443], 'particularly': [1445, 3180], 'most': [1448], 'RNA': [1449, 1480], 'viruses': [1450, 2289], 'because': [1451], 'their': [1453, 1465, 1509, 1781, 1853, 2973, 3633], 'comparatively': [1454], 'compact': [1455], 'genomes': [1456], 'resulting': [1459], 'multiform': [1460], 'multifunction': [1462], 'nature': [1463], 'driven': [1468, 2195], 'evolutionary': [1470], 'constraints': [1471, 1478], '(9Holmes': [1472], 'E.C.': [1473], 'Error': [1474], 'thresholds': [1475], 'evolution.Trends': [1482], 'Microbiol.': [1483], '2003;': [1484], '11:': [1485, 2544, 4187], '543-546Abstract': [1486], '(179)': [1494], 'Consequently,': [1497], 'different': [1498, 1506], 'groups': [1499], 'used': [1501], 'variety': [1503], 'marginally': [1505], 'studies.': [1510], 'Researchers': [1511, 2396], 'have,': [1512], 'therefore,': [1513], 'continued': [1514, 2399], 'work': [1516], 'refining': [1518], 'regulatory': [1521], 'elements': [1522], 'polypeptides': [1525], 'not': [1528, 1655, 1856], 'been': [1530, 3722, 3795, 4130], 'completely': [1531], 'characterized': [1532, 3926], 'methods': [1535, 3788], '(10Finkel': [1536, 1732], 'Mizrahi': [1538, 1734], 'O.': [1539, 1555, 1735, 1751, 2016, 2179, 2672, 3818, 4321], 'Nachshon': [1540, 1736], 'Weingarten-Gabbay': [1542, 1738], 'Morgenstern': [1544, 1740], 'Yahalom-Ronen': [1546, 1742], 'Tamir': [1548, 1744], 'Achdout': [1550, 1746], 'Stein': [1552, 1748], 'Israeli': [1554, 1750], 'Beth-Din': [1556, 1752], 'Melamed': [1558, 1754], 'Weiss': [1560, 1756], 'Israely': [1562, 1758], 'Paran': [1564, 1760], 'al.The': [1567, 1763, 3148], 'coding': [1568, 1764], 'capacity': [1569, 1765], 'SARS-CoV-2.Nature.': [1571, 1767], '2021;': [1572, 1768, 2693, 2747, 2935, 3015, 3094], '589:': [1573, 1769], '125-130Crossref': [1574, 1770], '(273)': [1577, 1773], '11Kim': [1580], 'Lee': [1582, 3879, 4002, 4343], 'J.Y.': [1583], 'J.S.': [1585, 2020, 2727], 'Kim': [1586, 1588], 'J.W.': [1587], 'V.N.': [1589], 'Chang': [1590, 3053], 'architecture': [1593], 'transcriptome.Cell.': [1596], '181:': [1598, 2061, 2117, 2384, 2484], '914-921.e10Abstract': [1599], '(1129)': [1607], '12Nomburg': [1610], 'Meyerson': [1612], 'DeCaprio': [1614], 'J.A.': [1615, 1691, 1809, 2012], 'Pervasive': [1616], 'generation': [1617], 'non-canonical': [1619], 'subgenomic': [1620], 'RNAs': [1621], 'SARS-CoV-2.Genome': [1623], '12:': [1626, 1720, 1838], '108Crossref': [1627], '(30)': [1630], '13Pancer': [1633], 'K.': [1634, 1638, 1650, 2252, 2262, 2525, 2604, 3076, 3403, 3890, 4013, 4212, 4354], 'Milewska': [1635], 'Owczarek': [1637], 'Dabrowska': [1639], 'Kowalski': [1641], 'Łabaj': [1643], 'P.P.': [1644], 'Branicki': [1645], 'Sanak': [1647], 'Pyrc': [1649], 'ORF10': [1653], 'vitro': [1658], 'vivo': [1661], 'humans.PLoS': [1663], 'Pathog.': [1664], '16e1008959Crossref': [1666], '(47)': [1669], '14Davidson': [1672], 'A.D.': [1673, 1791], 'Williamson': [1674, 1792], 'M.K.': [1675, 1793], 'Lewis': [1676, 1688, 1794, 1806], 'Shoemark': [1678, 1796], 'Carroll': [1680, 1798], 'M.W.': [1681, 1799], 'Heesom': [1682, 1800], 'K.J.': [1683, 1801], 'Zambon': [1684, 1802], 'Ellis': [1686, 1804], 'P.A.': [1689, 1807], 'Hiscox': [1690, 1808], 'Matthews': [1692, 1810], 'D.A.': [1693, 1811, 2658, 3455], 'Characterisation': [1694, 1812], 'transcriptome': [1697, 1815], 'reveals': [1702, 1820], 'passage': [1705, 1823], 'induced': [1706, 1824], 'in-frame': [1707, 1825], 'deletion': [1708, 1826], 'furin-like': [1711, 1829], 'cleavage': [1712, 1830], 'site': [1713, 1831], 'glycoprotein.Genome': [1717, 1835], '68Crossref': [1721, 1839], '(199)': [1724, 1842], 'For': [1727, 3980], 'example,': [1728, 3193], 'Finkel': [1729], 'al.': [1731, 1789, 3806, 3876, 3999, 4099, 4103], 'Scholar)': [1775, 1844, 3837, 3925, 4286], '23': [1777, 3966], 'unannotated': [1778], 'study': [1782, 1854], 'using': [1783, 4181], 'ribosome': [1784], 'profiling,': [1785], 'Davidson': [1787], '(14Davidson': [1790], '14%': [1847], 'transcripts': [1850], 'detected': [1851, 3838], 'do': [1855], 'code': [1857], 'known': [1860, 1926], 'ORF': [1861], 'peptides': [1865, 3567, 3751, 3823, 3841, 3861, 3930, 3942, 3967, 3976, 4108, 4115, 4119, 4290, 4326], 'transcripts.': [1868], 'our': [1870], 'knowledge,': [1871], 'there': [1872], 'no': [1874], 'database': [1877, 3024], 'compiling': [1878, 2812], 'information,': [1880], 'interested': [1882], 'readers': [1883], 'directed': [1885], 'original': [1888], 'research': [1889, 3908, 4031, 4372], 'articles.': [1890], 'While': [1891, 2777], 'preliminary': [1895], 'itself': [1903], 'being': [1905], 'defined,': [1906], 'determining': [1910], 'required': [1915, 2684], 'facilitative': [1918], 'infection.': [1920, 2307, 2776, 3671], 'Angiotensin-converting': [1921], 'enzyme': [1922], '(ACE2)': [1924, 2274], 'surface': [1932, 1947, 2164, 2336, 2406], 'several': [1935, 3798], 'coronaviruses,': [1937], 'including': [1938, 3537], 'SARS-CoV-1,': [1939], 'quickly': [1952], 'confirmed': [1953, 2316], '(15Zhou': [1954], 'X.L.': [1957], 'X.G.': [1959], 'Si': [1966], 'H.R.': [1967], 'C.L.': [1973, 2014], 'H.D.': [1975], 'Luo': [1978], 'Guo': [1980, 2222, 2508, 2510], 'Jiang': [1982], 'R.D.': [1983, 3449], 'outbreak': [1987], 'probable': [1994], 'bat': [1995], 'origin.Nature.': [1996], '270-273Crossref': [1999], '(12621)': [2002], '16Wrapp': [2005], 'Corbett': [2009], 'K.S.': [2010], 'Goldsmith': [2011], 'Hsieh': [2013, 2247], 'Abiona': [2015], 'Graham': [2017], 'B.S.': [2018], 'McLellan': [2019], 'Cryo-EM': [2021], 'structure': [2022, 3605], '2019-nCoV': [2025], 'prefusion': [2029], 'conformation.Science.': [2030], '367:': [2032, 2238], '1260-1263Crossref': [2033], '(74)': [2036], '17Walls': [2039], 'A.C.': [2040], 'Park': [2041], 'Y.J.': [2042], 'Tortorici': [2043], 'M.A.': [2044, 2094, 2361, 2461, 2575], 'Wall': [2045], 'McGuire': [2047], 'A.T.': [2048], 'Veesler': [2049], 'Structure,': [2051], 'function,': [2052], 'antigenicity': [2054], 'glycoprotein.Cell.': [2059], '281-292.e6Abstract': [2062], '(5108)': [2070], '18Hoffmann': [2073], 'Kleine-Weber': [2075, 2342, 2442], 'Schroeder': [2077, 2344, 2444], 'Krüger': [2079, 2346, 2446], 'Herrler': [2081, 2087, 2348, 2354, 2448, 2454], 'Erichsen': [2083, 2350, 2450], 'Schiergens': [2085, 2352, 2452], 'T.S.': [2086, 2353, 2453], 'N.H.': [2090, 2357, 2457, 3457], 'Nitsche': [2091, 2358, 2458], 'Müller': [2093, 2360, 2460], 'Drosten': [2095, 2362, 2462], 'Pöhlmann': [2097, 2180, 2364, 2464], 'entry': [2101, 2194, 2368, 2468, 2535, 3535, 3565, 3591], 'ACE2': [2104, 2131, 2186, 2339, 2371, 2471, 3604], 'TMPRSS2': [2106, 2182, 2192, 2373, 2473, 2580], 'blocked': [2109, 2376, 2476], 'clinically': [2112, 2379, 2479], 'proven': [2113, 2380, 2480], 'inhibitor.Cell.': [2115, 2382, 2482], '271-280.e8Abstract': [2118, 2385, 2485], '(11476)': [2126, 2393, 2493], 'Mature': [2129], 'membrane-bound': [2130], '788-amino': [2134], 'acid': [2135, 3773], 'single-pass': [2136], 'type': [2137], 'I': [2138, 2277], 'protein': [2140, 2829, 3580, 3653], '(~91': [2141], 'kDa': [2142], 'without': [2143], 'modifications': [2145], '[PTMs])': [2146], 'consisting': [2147], 'N-terminal': [2150], 'peptidase': [2151], 'domain': [2152, 2157], 'C-terminal': [2155], 'collectrin-like': [2156], 'causes': [2159], 'homodimerization': [2160], 'transmembrane': [2168, 2310], 'helix': [2169], '(19Heurich': [2170], 'Hofmann-Winkler': [2172], 'Gierer': [2174], 'Liepold': [2176], 'Jahn': [2178], 'ADAM17': [2184], 'cleave': [2185], 'differentially': [2187], 'only': [2189], 'proteolysis': [2190], 'augments': [2193], 'protein.J.': [2204], 'Virol.': [2205], '2014;': [2206, 3366], '88:': [2207], '1293-1307Crossref': [2208], '(573)': [2211], '20Yan': [2214], 'Zhou': [2224], 'basis': [2227], 'recognition': [2230], 'full-length': [2234], 'ACE2.Science.': [2236], '1444-1448Crossref': [2239], '(3051)': [2242], '21Donoghue': [2245], 'Baronas': [2249], 'E.': [2250, 2670, 2911, 2917, 2991, 2997, 3397, 3405, 3503], 'Godbout': [2251], 'Gosselin': [2253], 'Stagliano': [2255], 'Donovan': [2257], 'Woolf': [2259], 'Robison': [2261], 'Jeyaseelan': [2263], 'Breitbart': [2265], 'R.E.': [2266, 2713], 'Acton': [2267], 'angiotensin-converting': [2271], 'enzyme-related': [2272], 'carboxypeptidase': [2273], 'converts': [2275], 'angiotensin': [2276, 2279], '1-9.Circ.': [2280], 'Res.': [2281, 2888, 2934, 3014, 3163, 3238, 3315, 3511], '2000;': [2282], '87:': [2283], 'E1-E9Crossref': [2284], 'Many': [2288, 3102], 'addition': [2291], 'utilize': [2292], 'proteases': [2295, 2411, 2772], 'machinery': [2300], 'enable': [2302], 'facilitate': [2304], 'serine': [2311], '(TMPRSS2)': [2314], 'key': [2319], 'factor': [2320, 3566], 'one': [2325, 4123], 'confirming': [2330], '(18Hoffmann': [2340, 2440], 'since': [2398], 'pursue': [2401], 'alternative': [2403, 2410], 'receptors,': [2407], '(TMPRSS4,': [2412], 'cathepsin': [2413], 'B': [2414], 'L),': [2416], 'involved': [2419], 'processes': [2421], 'endosome': [2424], 'maturation': [2425], '(a': [2426], 'FYVE': [2427], 'finger–containing': [2428], 'phosphoinositide': [2429], 'kinase': [2430], '[PIKFyve],': [2431], 'two-pore': [2432], 'channel': [2433], '2)': [2434], 'critical': [2437, 2743], '22Ou': [2496], 'Lei': [2500], 'Mi': [2504], 'Xiang': [2516], 'Mu': [2518], 'al.Characterization': [2527], 'glycoprotein': [2530, 4238], 'cross-reactivity': [2539], 'SARS-CoV.Nat.': [2541], 'Commun.': [2542], '1620Crossref': [2545], '(1965)': [2548], '23Zang': [2551], 'Gomez': [2553], 'Castro': [2554], 'M.F.': [2555], 'McCune': [2556], 'B.T.': [2557], 'Zeng': [2558], 'Rothlauf': [2560], 'P.W.': [2561], 'Sonnek': [2562], 'N.M.': [2563], 'Brulois': [2566], 'K.F.': [2567, 3445], 'Greenberg': [2570], 'H.B.': [2571], 'Diamond': [2572], 'M.S.': [2573, 2719, 3329, 4154], 'Ciorba': [2574], 'Whelan': [2576], 'S.P.J.': [2577], 'TMPRSS4': [2582], 'promote': [2583], 'small': [2588], 'intestinal': [2589], 'enterocytes.Sci.': [2590], 'Immunol.': [2591], '5:': [2593], '47Crossref': [2594], '(257)': [2596], '24Matsuyama': [2599], 'Nao': [2601], 'Shirato': [2603], 'Kawase': [2605], 'Saito': [2607], 'Takayama': [2609], 'I.': [2610, 3401, 3693], 'Nagata': [2611], 'Sekizuka': [2613], 'Katoh': [2615], 'Kato': [2617], 'Sakata': [2619], 'Tahara': [2621], 'Kutsuna': [2623], 'Ohmagari': [2625], 'Kuroda': [2627], 'al.Enhanced': [2630], 'isolation': [2631], 'TMPRSS2-expressing': [2635], 'cells.Proc.': [2636], 'Natl.': [2637], 'Acad.': [2638], 'Sci.': [2639, 3093], 'U.': [2640, 4164], '117:': [2644], '7001-7003Crossref': [2645], '(788)': [2648], '25Daniloski': [2651], 'Jordan': [2653], 'T.X.': [2654], 'Wessels': [2655], 'H.H.': [2656], 'Hoagland': [2657], 'Kasela': [2659], 'Legut': [2661], 'Maniatis': [2663], 'Mimitou': [2665], 'E.P.': [2666], 'Geller': [2669], 'Danziger': [2671], 'Rosenberg': [2673], 'B.R.': [2674], 'Phatnani': [2675], 'Smibert': [2677], 'Lappalainen': [2679], 'al.Identification': [2682], 'cells.Cell.': [2692], '184:': [2694, 2748], '92-105.e16Abstract': [2695], '(263)': [2703], '26Wei': [2706], 'Alfajaro': [2708], 'M.M.': [2709], 'DeWeirdt': [2710], 'P.C.': [2711], 'Hanna': [2712], 'Lu-Culligan': [2714], 'W.J.': [2715], 'Cai': [2716, 3294], 'W.L.': [2717], 'Strine': [2718], 'S.M.': [2721, 3331], 'Graziano': [2722], 'V.R.': [2723], 'Schmitz': [2724], 'C.O.': [2725], 'Mankowski': [2728], 'M.C.': [2729], 'Filler': [2730], 'R.B.': [2731], 'Ravindra': [2732], 'N.G.': [2733], 'Gasque': [2734], 'V.': [2735, 3501, 3886, 4009, 4057, 4350], 'al.Genome-wide': [2737], 'CRISPR': [2738], 'screens': [2739], 'reveal': [2740], 'infection.Cell.': [2746], '76-91.e13Abstract': [2749], '(233)': [2757], 'However,': [2760], 'questions': [2762], 'still': [2763], 'remain': [2764], 'regarding': [2765], 'role': [2767], 'behavior': [2769, 3559], 'during': [2775, 3655, 3670, 3679], 'experimental': [2778, 3828, 4331], 'continued,': [2781], 'furthering': [2782], 'understanding': [2783], 'biology': [2786], 'parallel': [2790, 4226], 'focused': [2793, 3621], 'cataloging': [2795], 'increasing': [2797], 'accessibility': [2799], 'information.': [2802], 'Of': [2803], 'particular': [2804], 'resources': [2811, 2879, 3469], 'sequences,': [2814], 'annotations,': [2815], 'interactions': [2817, 3636], '(PPIs),': [2818], 'PTMs,': [2819], 'datasets.': [2822], 'Genome': [2823], 'derived': [2833], 'Global': [2838, 2850], 'Initiative': [2839], 'Sharing': [2841], 'Avian': [2842], 'Influenza': [2843], 'Data': [2844, 3285], '(27Shu': [2845], 'McCauley': [2847], 'GISAID:': [2849], 'initiative': [2851], 'sharing': [2853, 4113], 'all': [2854], 'influenza': [2855], 'data': [2856, 2951, 3160, 3179, 3306, 4077], '-': [2857], 'vision': [2859], 'reality.Euro': [2861], 'Surveill.': [2862], '2017;': [2863, 3164], '22:': [2864], '30494Crossref': [2865], '(1324)': [2868], 'Scholar),': [2870, 2896, 2942, 3243, 3278, 3323, 3373, 4048], '(28Coordinators': [2876], 'N.R.': [2877], 'Database': [2878], 'national': [2882], 'center': [2883], 'biotechnology': [2885], 'information.Nucleic': [2886], 'Acids': [2887, 2933, 3013, 3162, 3237, 3510], '2018;': [2889, 4084], '46:': [2890], 'D8-D13Crossref': [2891], '(850)': [2894], 'European': [2897, 2901, 2921, 2955, 2959, 3001], 'Molecular': [2898, 2956], 'Biology': [2899, 2957], "Laboratory's": [2900, 2958], 'Bioinformatics': [2902, 2960], 'Institute': [2903, 2961], '(29Cantelli': [2904, 2984], 'Cochrane': [2906, 2986], 'Brooksbank': [2908, 2988], 'McDonagh': [2910, 2990], 'Flicek': [2912, 2992], 'McEntyre': [2914, 2994], 'Birney': [2916, 2996], 'Apweiler': [2918, 2998], 'bioinformatics': [2922, 3002], 'institute:': [2923, 3003], 'Empowering': [2924, 3004], 'cooperation': [2925, 3005], 'response': [2927, 3007], 'crisis.Nucleic': [2932, 3012], '49:': [2936, 3016], 'D29-D37Crossref': [2937, 3017], '(0)': [2940, 3020, 4247], 'organizations.': [2945], '(COVID-19)': [2950], 'portal': [2952], '(https://www.covid19dataportal.org/)': [2953], 'maintains': [2962], 'updated': [2964, 3047], 'curated': [2965, 3087], 'collection': [2966], 'relationships': [2974], 'pathways': [2978], 'gene': [2981], 'expression': [2982, 3581, 3654], 'specific': [3025], 'PPIs': [3027], 'Biological': [3032], 'General': [3033], 'Repository': [3034], 'Interaction': [3036], 'Datasets': [3037], 'curation': [3038], 'project': [3039], '(https://thebiogrid.org/project/3)': [3040], 'consulted': [3044, 4137], 'continuously': [3046], '(30Oughtred': [3049], 'Rust': [3051], 'Breitkreutz': [3055], 'B.J.': [3056], 'Stark': [3057], 'Willems': [3059], 'Boucher': [3061], 'Leung': [3063], 'Kolas': [3065], 'Dolma': [3069], 'Coulombe-Huntington': [3071], 'Chatr-Aryamontri': [3073], 'Dolinski': [3075], 'Tyers': [3077], 'BioGRID': [3080], 'database:': [3081], 'comprehensive': [3083], 'biomedical': [3084], 'resource': [3085, 3232, 3309], 'protein,': [3088], 'genetic,': [3089], 'chemical': [3091], 'interactions.Protein': [3092], '30:': [3095, 3473], '187-200Crossref': [3096], '(321)': [3099], 'datasets': [3104], 'relevant': [3106, 3790, 3945], 'through': [3110, 3489], 'ProteomeXchange': [3111, 3149], 'subsidiary': [3114], 'databases': [3115, 3176], '(http://www.proteomexchange.org/)': [3116], '(31Deutsch': [3117], 'E.W.': [3118], 'Csordas': [3119], 'Sun': [3121], 'Jarnuczak': [3123], 'Perez-Riverol': [3125], 'Ternent': [3127], 'Campbell': [3129, 3446], 'D.S.': [3130, 3343], 'Bernal-Llinares': [3131], 'Okuda': [3133], 'Kawano': [3135], 'Moritz': [3137], 'R.L.': [3138], 'Carver': [3139], 'J.J.': [3140], 'Ishihama': [3143], 'Bandeira': [3145], 'consortium': [3150], '2017:': [3152], 'Supporting': [3153], 'cultural': [3155], 'change': [3156], 'public': [3159, 4073], 'deposition.Nucleic': [3161], '45:': [3165], 'D1100-D1106Crossref': [3166], '(579)': [3169], 'contain': [3177], 'analyzing': [3183], '(or': [3184], 'developing': [3185], 'assays': [3186, 3740, 3864, 3901, 3959, 4024, 4365], 'analyze)': [3188], 'factors,': [3191], 'proteomicsDB': [3194], '(https://www.proteomicsdb.org/)': [3195], '(32Samaras': [3196], 'Schmidt': [3198], 'Frejno': [3200], 'Gessulat': [3202], 'Reinecke': [3204], 'Jarzab': [3206], 'Zecha': [3208, 3874, 3997, 4101], 'Mergner': [3210], 'Giansanti': [3212], 'Ehrlich': [3214], 'H.C.': [3215], 'Aiche': [3216], 'Rank': [3218], 'Kienegger': [3220], 'Krcmar': [3222], 'Kuster': [3224, 3897, 4020, 4361], 'al.ProteomicsDB:': [3227], 'multi-omics': [3229], 'multi-organism': [3231], 'life': [3234], 'science': [3235], 'research.Nucleic': [3236], '48:': [3240], 'D1153-D1163PubMed': [3241], 'PAXdb': [3244], '(https://pax-db.org/)': [3245], '(33Wang': [3246], 'Herrmann': [3248], 'C.J.': [3249], 'Simonovic': [3250], 'Szklarczyk': [3252], 'von': [3254], 'Mering': [3255], 'Version': [3257], '4.0': [3258], 'PaxDb:': [3260], 'Protein': [3261, 3377], 'abundance': [3262], 'data,': [3263], 'integrated': [3264], 'across': [3265, 3842], 'model': [3266], 'organisms,': [3267], 'tissues,': [3268], 'cell-lines.Proteomics.': [3270], '2015;': [3271, 3316, 3418, 3512], '15:': [3272], '3163-3168Crossref': [3273], '(285)': [3276], 'Clinical': [3280], 'Proteomic': [3281], 'Tumor': [3282], 'Consortium': [3284], 'Portal': [3286], '(https://cptac-data-portal.georgetown.edu/cptacPublic/)': [3287], '(34Edwards': [3288], 'N.J.': [3289], 'Oberti': [3290], 'Thangudu': [3292], 'R.R.': [3293], 'McGarvey': [3296], 'P.B.': [3297], 'Jacob': [3298], 'Madhavan': [3300], 'Ketchum': [3302], 'K.A.': [3303], 'CPTAC': [3305], 'portal:': [3307], 'cancer': [3311], 'research.J.': [3313], 'Proteome': [3314, 3325], '14:': [3317], '2707-2713Crossref': [3318], '(186)': [3321], 'Human': [3324, 3376], 'Map': [3326], '(http://www.humanproteomemap.org/)': [3327], '(35Kim': [3328], 'Pinto': [3330], 'Getnet': [3332], 'Nirujogi': [3334], 'R.S.': [3335], 'Manda': [3336], 'S.S.': [3337], 'Chaerkady': [3338, 4194], 'Madugundu': [3340], 'A.K.': [3341, 4150], 'Kelkar': [3342], 'Isserlin': [3344], 'Jain': [3346], 'Thomas': [3348], 'J.K.': [3349, 4255], 'Muthusamy': [3350], 'Leal-Rojas': [3352], 'Kumar': [3354], 'Sahasrabuddhe': [3356], 'N.A.': [3357], 'draft': [3360], 'map': [3361, 3413], 'proteome.Nature.': [3365], '509:': [3367], '575-581Crossref': [3368], '(1520)': [3371], 'Atlas': [3378], '(https://www.proteinatlas.org/)': [3379], '(36Uhlen': [3380], 'Fagerberg': [3382], 'Hallström': [3384], 'B.M.': [3385], 'Lindskog': [3386], 'Oksvold': [3388], 'Mardinoglu': [3390], 'Sivertsson': [3392], 'Å.': [3393], 'Kampf': [3394], 'Sjöstedt': [3396], 'Asplund': [3398], 'Olsson': [3400], 'Edlund': [3402], 'Lundberg': [3404], 'Navani': [3406], 'Szigyarto': [3408], 'C.A.': [3409], 'al.Proteomics.': [3411], 'Tissue-based': [3412], 'proteome.Science.': [3417], '347:': [3419], '1260419Crossref': [3420], 'Glycan': [3424], 'various': [3427], 'compiled': [3430], 'GlyGen': [3432], '(https://www.glygen.org/)': [3433], '(37York': [3434], 'W.S.': [3435], 'Mazumder': [3436], 'Ranzinger': [3438], 'Edwards': [3440], 'Kahsay': [3442], 'Aoki-Kinoshita': [3444], 'M.P.': [3447], 'Cummings': [3448], 'Feizi': [3450], 'Martin': [3452], 'Natale': [3454], 'Packer': [3456], 'Woods': [3458], 'R.J.': [3459], 'Agarwal': [3460], 'Arpinar': [3462], 'al.GlyGen:': [3465], 'Computational': [3466], 'informatics': [3468], 'glycoscience.Glycobiology.': [3471], '72-73Crossref': [3474], '(72)': [3477], 'addition,': [3481], 'glycan': [3482], 'PTM': [3485], 'PhosphoSitePlus': [3490], '(https://www.phosphosite.org/)': [3491], '(38Hornbeck': [3492], 'P.V.': [3493], 'Murray': [3496], 'Kornhauser': [3498], 'J.M.': [3499], 'Latham': [3500], 'Skrzypek': [3502], 'PhosphoSitePlus,': [3504], '2014:': [3505], 'Mutations,': [3506], 'PTMs': [3507], 'recalibrations.Nucleic': [3509], '43:': [3513], 'D512-D520Crossref': [3514], '(1709)': [3517], 'half': [3523, 3611], 'article,': [3526], 'ACE2.': [3542], 'literature': [3544], 'area': [3547], 'divided': [3551], 'among': [3552], '(1)': [3553], 'examining': [3555], 'qualitative': [3558, 3729], 'mass': [3569, 3832, 4229, 4267, 4335], 'spectrometric': [3570], 'experiments;': [3571], '(2)': [3572], 'either': [3577], 'detail': [3578], 'over': [3582], 'time': [3583], 'examine': [3585], 'distribution': [3587], 'tissues': [3595, 3631], 'cells;': [3597], '(3)': [3599], 'PTMs.': [3607, 3784], 'second': [3610], 'overview': [3618], '(primarily': [3627], 'human)': [3628], 'cells': [3629, 3856, 3932], 'responses': [3634, 3666], 'virus.': [3640], 'These': [3641], 'encompass': [3643], 'PPI': [3644], 'mapping': [3645], 'experiments,': [3646], 'determination': [3657, 3749], 'putative': [3659], 'biomarkers,': [3660], 'SARS-CoV-2–directed': [3668], 'Another': [3672], 'review': [3673], 'preparation': [3680], 'article': [3683, 3869, 3995], 'interest': [3688], 'reading': [3691], '(39Mahmud': [3692], 'Garrett': [3694], 'T.J.': [3695], 'Mass': [3696, 3707], 'spectrometry': [3697, 3833, 4230, 4268, 4336], 'techniques': [3698], 'emerging': [3700], 'pathogens': [3701], 'studies:': [3702], 'perspectives.J.': [3704], 'Am.': [3705], 'Soc.': [3706], 'Spectrom.': [3708], '31:': [3710], '2013-2024Crossref': [3711], '(44)': [3714], 'containing': [3724], 'technology–based': [3739], 'clinical': [3742, 3791, 4265], 'diagnostics': [3743], 'development.': [3744], 'Important': [3745], 'suitable': [3752], 'targeted': [3754, 3825, 3863, 4110, 4328], 'method': [3755, 4111, 4176], 'LC–MS': [3758], 'experiments': [3759], 'terms': [3761], 'level': [3763], 'detection': [3765, 4234, 4293], 'quantification,': [3767], 'specificity': [3768], 'stability': [3770], 'amino': [3772], 'genomes,': [3777], 'presence': [3780], 'absence': [3782], 'Testing': [3785], 'developed': [3787, 3964], 'samples': [3792], 'groups.': [3799], 'study,': [3803], 'Gouveia': [3804, 3871, 4097], '(40Gouveia': [3807], 'Grenga': [3809, 4312], 'Gaillard': [3811, 4314], 'J.C.': [3812, 4315], 'Gallais': [3813, 4316], 'Bellanger': [3815, 4318], 'Pible': [3817, 4320], 'Armengaud': [3819, 4322], 'Shortlisting': [3821, 4324], 'data-dependent': [3829, 4332], 'acquisition': [3830, 4333], 'tandem': [3831, 4334], 'data.Proteomics.': [3834, 4337], '20e2000107Google': [3836, 4339], '101': [3839], '(tryptic)': [3840], 'six': [3843, 3985], '(N,': [3846], 'S,': [3847], 'M,': [3848, 4117], 'ORF1ab,': [3849], 'ORF3a,': [3850], 'ORF8)': [3852], 'virus-infected': [3854], 'Vero': [3855], 'recommended': [3859, 4104], '14': [3860], '(Table': [3865, 4287], '1': [3866], 'al.).': [3873], '(41Zecha': [3877, 4000], 'C.-Y.': [3880, 4003, 4344], 'Bayer': [3881, 4004, 4345], 'F.P.': [3882, 4005, 4346], 'Grass': [3885, 4008, 4349], 'Zerweck': [3887, 4010, 4351], 'Schnatbaum': [3889, 4012, 4353], 'Michler': [3891, 4014, 4355], 'Pichlmair': [3893, 4016, 4357], 'Ludwig': [3895, 4018, 4062, 4359], 'Data,': [3899, 4022, 4363], 'reagents,': [3900, 4023, 4364], 'merits': [3903, 4026, 4367], 'testing.Mol.': [3910, 4033], 'Cell.': [3911, 4034, 4082], 'Proteomics.': [3912, 4035, 4083], '19:': [3914, 4037], '1503-1522Abstract': [3915, 4038], '(53)': [3923, 4046], 'both': [3927], 'tryptic': [3928, 3939], '(from': [3931], 'culture': [3935], 'supernatant': [3936], 'independently)': [3937], 'four': [3944], 'line': [3947], '(discussed': [3949], 'later': [3951], 'review).': [3954], 'Parallel': [3955], 'reaction': [3956, 4227], 'monitoring': [3957, 4228], '(PRM)': [3958], 'favorable': [3969], 'properties': [3970], 'nanoflow': [3972], 'PRM': [3973], '21': [3975], 'microflow': [3978], 'PRM.': [3979], 'each': [3981], 'peptide,': [3982], 'top': [3984], 'transitions': [3986], 'detailed': [3989], '(supplemental': [3990], 'Table': [3991], 'S3': [3992], 'spectral': [4049], 'libraries': [4050], 'Panorama': [4054, 4070], 'Public': [4055], '(42Sharma': [4056], 'Eckels': [4058], 'Schilling': [4060], 'Jaffe': [4064], 'J.D.': [4065], 'MacCoss': [4066], 'M.J.': [4067], 'MacLean': [4068], 'public:': [4071], 'repository': [4074], 'sets': [4078], 'processed': [4079], 'skyline.Mol.': [4081], '17:': [4085], '1239-1244Abstract': [4086], '(113)': [4094], 'Scholar)).': [4096], 'similar': [4105], 'lists': [4106], 'development,': [4112], 'five': [4118], 'N,': [4121], 'peptide': [4124], 'Additional': [4127], 'recently': [4133], '(43Singh': [4141], 'Chakraborty': [4143], 'Marwal': [4145], 'Radhakrishan': [4147], 'V.S.': [4148], 'Bhaskar': [4149], 'Vashisht': [4151], 'Dhar': [4153], 'Pradhan': [4155], 'Ranjan': [4157], 'Imran': 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