Get quick answers to your questions about the article from our AI researcher chatbot
{'id': 'https://openalex.org/W3121185202', 'doi': 'https://doi.org/10.1128/msystems.00943-20', 'title': 'Microbiome Search Engine 2: a Platform for Taxonomic and Functional Search of Global Microbiomes on the Whole-Microbiome Level', 'display_name': 'Microbiome Search Engine 2: a Platform for Taxonomic and Functional Search of Global Microbiomes on the Whole-Microbiome Level', 'publication_year': 2021, 'publication_date': '2021-01-18', 'ids': {'openalex': 'https://openalex.org/W3121185202', 'doi': 'https://doi.org/10.1128/msystems.00943-20', 'mag': '3121185202', 'pmid': 'https://pubmed.ncbi.nlm.nih.gov/33468706', 'pmcid': 'https://www.ncbi.nlm.nih.gov/pmc/articles/7820668'}, 'language': 'en', 'primary_location': {'is_oa': True, 'landing_page_url': 'https://doi.org/10.1128/msystems.00943-20', 'pdf_url': None, 'source': {'id': 'https://openalex.org/S4210181942', 'display_name': 'mSystems', 'issn_l': '2379-5077', 'issn': ['2379-5077'], 'is_oa': True, 'is_in_doaj': True, 'is_core': True, 'host_organization': 'https://openalex.org/P4310320263', 'host_organization_name': 'American Society for Microbiology', 'host_organization_lineage': ['https://openalex.org/P4310320263'], 'host_organization_lineage_names': ['American Society for Microbiology'], 'type': 'journal'}, 'license': 'cc-by', 'license_id': 'https://openalex.org/licenses/cc-by', 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, 'type': 'article', 'type_crossref': 'journal-article', 'indexed_in': ['crossref', 'doaj'], 'open_access': {'is_oa': True, 'oa_status': 'gold', 'oa_url': 'https://doi.org/10.1128/msystems.00943-20', 'any_repository_has_fulltext': True}, 'authorships': [{'author_position': 'first', 'author': {'id': 'https://openalex.org/A5086550640', 'display_name': 'Gongchao Jing', 'orcid': 'https://orcid.org/0000-0001-5911-7615'}, 'institutions': [{'id': 'https://openalex.org/I4210158139', 'display_name': 'Qingdao Institute of Bioenergy and Bioprocess Technology', 'ror': 'https://ror.org/05h3vcy91', 'country_code': 'CN', 'type': 'facility', 'lineage': ['https://openalex.org/I19820366', 'https://openalex.org/I4210158139']}, {'id': 'https://openalex.org/I19820366', 'display_name': 'Chinese Academy of Sciences', 'ror': 'https://ror.org/034t30j35', 'country_code': 'CN', 'type': 'government', 'lineage': ['https://openalex.org/I19820366']}], 'countries': ['CN'], 'is_corresponding': False, 'raw_author_name': 'Gongchao Jing', 'raw_affiliation_strings': ['Shandong Institute of Energy Research, Qingdao, China', 'Single-Cell Center, CAS Key Laboratory of Biofuels and Shandong Key Laboratory of Energy Genetics, Qingdao Institute of BioEnergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, China'], 'affiliations': [{'raw_affiliation_string': 'Single-Cell Center, CAS Key Laboratory of Biofuels and Shandong Key Laboratory of Energy Genetics, Qingdao Institute of BioEnergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, China', 'institution_ids': ['https://openalex.org/I4210158139', 'https://openalex.org/I19820366']}, {'raw_affiliation_string': 'Shandong Institute of Energy Research, Qingdao, China', 'institution_ids': []}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5102000401', 'display_name': 'Lu Liu', 'orcid': 'https://orcid.org/0000-0003-0609-7248'}, 'institutions': [{'id': 'https://openalex.org/I4210158139', 'display_name': 'Qingdao Institute of Bioenergy and Bioprocess Technology', 'ror': 'https://ror.org/05h3vcy91', 'country_code': 'CN', 'type': 'facility', 'lineage': ['https://openalex.org/I19820366', 'https://openalex.org/I4210158139']}, {'id': 'https://openalex.org/I19820366', 'display_name': 'Chinese Academy of Sciences', 'ror': 'https://ror.org/034t30j35', 'country_code': 'CN', 'type': 'government', 'lineage': ['https://openalex.org/I19820366']}], 'countries': ['CN'], 'is_corresponding': False, 'raw_author_name': 'Lu Liu', 'raw_affiliation_strings': ['Shandong Institute of Energy Research, Qingdao, China', 'Single-Cell Center, CAS Key Laboratory of Biofuels and Shandong Key Laboratory of Energy Genetics, Qingdao Institute of BioEnergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, China'], 'affiliations': [{'raw_affiliation_string': 'Shandong Institute of Energy Research, Qingdao, China', 'institution_ids': []}, {'raw_affiliation_string': 'Single-Cell Center, CAS Key Laboratory of Biofuels and Shandong Key Laboratory of Energy Genetics, Qingdao Institute of BioEnergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, China', 'institution_ids': ['https://openalex.org/I4210158139', 'https://openalex.org/I19820366']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5101915021', 'display_name': 'Zengbin Wang', 'orcid': 'https://orcid.org/0000-0001-6464-7311'}, 'institutions': [{'id': 'https://openalex.org/I19820366', 'display_name': 'Chinese Academy of Sciences', 'ror': 'https://ror.org/034t30j35', 'country_code': 'CN', 'type': 'government', 'lineage': ['https://openalex.org/I19820366']}, {'id': 'https://openalex.org/I4210158139', 'display_name': 'Qingdao Institute of Bioenergy and Bioprocess Technology', 'ror': 'https://ror.org/05h3vcy91', 'country_code': 'CN', 'type': 'facility', 'lineage': ['https://openalex.org/I19820366', 'https://openalex.org/I4210158139']}], 'countries': ['CN'], 'is_corresponding': False, 'raw_author_name': 'Zengbin Wang', 'raw_affiliation_strings': ['Shandong Institute of Energy Research, Qingdao, China', 'Single-Cell Center, CAS Key Laboratory of Biofuels and Shandong Key Laboratory of Energy Genetics, Qingdao Institute of BioEnergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, China'], 'affiliations': [{'raw_affiliation_string': 'Single-Cell Center, CAS Key Laboratory of Biofuels and Shandong Key Laboratory of Energy Genetics, Qingdao Institute of BioEnergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, China', 'institution_ids': ['https://openalex.org/I19820366', 'https://openalex.org/I4210158139']}, {'raw_affiliation_string': 'Shandong Institute of Energy Research, Qingdao, China', 'institution_ids': []}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5100459675', 'display_name': 'Yufeng Zhang', 'orcid': 'https://orcid.org/0000-0001-8236-1878'}, 'institutions': [{'id': 'https://openalex.org/I4210158139', 'display_name': 'Qingdao Institute of Bioenergy and Bioprocess Technology', 'ror': 'https://ror.org/05h3vcy91', 'country_code': 'CN', 'type': 'facility', 'lineage': ['https://openalex.org/I19820366', 'https://openalex.org/I4210158139']}, {'id': 'https://openalex.org/I19820366', 'display_name': 'Chinese Academy of Sciences', 'ror': 'https://ror.org/034t30j35', 'country_code': 'CN', 'type': 'government', 'lineage': ['https://openalex.org/I19820366']}], 'countries': ['CN'], 'is_corresponding': False, 'raw_author_name': 'Yufeng Zhang', 'raw_affiliation_strings': ['College of Computer Science and Technology, Qingdao University, Qingdao, China', 'Shandong Institute of Energy Research, Qingdao, China', 'Single-Cell Center, CAS Key Laboratory of Biofuels and Shandong Key Laboratory of Energy Genetics, Qingdao Institute of BioEnergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, China'], 'affiliations': [{'raw_affiliation_string': 'College of Computer Science and Technology, Qingdao University, Qingdao, China', 'institution_ids': []}, {'raw_affiliation_string': 'Single-Cell Center, CAS Key Laboratory of Biofuels and Shandong Key Laboratory of Energy Genetics, Qingdao Institute of BioEnergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, China', 'institution_ids': ['https://openalex.org/I4210158139', 'https://openalex.org/I19820366']}, {'raw_affiliation_string': 'Shandong Institute of Energy Research, Qingdao, China', 'institution_ids': []}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5100340654', 'display_name': 'Qian Li', 'orcid': 'https://orcid.org/0000-0003-1697-235X'}, 'institutions': [{'id': 'https://openalex.org/I4210148850', 'display_name': 'National Science Library', 'ror': 'https://ror.org/04ndjyr10', 'country_code': 'CN', 'type': 'archive', 'lineage': ['https://openalex.org/I19820366', 'https://openalex.org/I4210148850']}], 'countries': ['CN'], 'is_corresponding': False, 'raw_author_name': 'Li Qian', 'raw_affiliation_strings': ['National Science Library, Chinese Academy of Sciences, Beijing, China'], 'affiliations': [{'raw_affiliation_string': 'National Science Library, Chinese Academy of Sciences, Beijing, China', 'institution_ids': ['https://openalex.org/I4210148850']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5082626926', 'display_name': 'Caiyun Gao', 'orcid': 'https://orcid.org/0000-0002-0002-5174'}, 'institutions': [{'id': 'https://openalex.org/I59028903', 'display_name': 'Ocean University of China', 'ror': 'https://ror.org/04rdtx186', 'country_code': 'CN', 'type': 'education', 'lineage': ['https://openalex.org/I59028903']}], 'countries': ['CN'], 'is_corresponding': False, 'raw_author_name': 'Chunxiao Gao', 'raw_affiliation_strings': ['Department of Computer Science and Technology, Ocean University of China, Qingdao, China'], 'affiliations': [{'raw_affiliation_string': 'Department of Computer Science and Technology, Ocean University of China, Qingdao, China', 'institution_ids': ['https://openalex.org/I59028903']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5100437684', 'display_name': 'Meng Zhang', 'orcid': 'https://orcid.org/0000-0001-5841-4079'}, 'institutions': [{'id': 'https://openalex.org/I4210158139', 'display_name': 'Qingdao Institute of Bioenergy and Bioprocess Technology', 'ror': 'https://ror.org/05h3vcy91', 'country_code': 'CN', 'type': 'facility', 'lineage': ['https://openalex.org/I19820366', 'https://openalex.org/I4210158139']}, {'id': 'https://openalex.org/I19820366', 'display_name': 'Chinese Academy of Sciences', 'ror': 'https://ror.org/034t30j35', 'country_code': 'CN', 'type': 'government', 'lineage': ['https://openalex.org/I19820366']}], 'countries': ['CN'], 'is_corresponding': False, 'raw_author_name': 'Meng Zhang', 'raw_affiliation_strings': ['Shandong Institute of Energy Research, Qingdao, China', 'Single-Cell Center, CAS Key Laboratory of Biofuels and Shandong Key Laboratory of Energy Genetics, Qingdao Institute of BioEnergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, China'], 'affiliations': [{'raw_affiliation_string': 'Shandong Institute of Energy Research, Qingdao, China', 'institution_ids': []}, {'raw_affiliation_string': 'Single-Cell Center, CAS Key Laboratory of Biofuels and Shandong Key Laboratory of Energy Genetics, Qingdao Institute of BioEnergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, China', 'institution_ids': ['https://openalex.org/I4210158139', 'https://openalex.org/I19820366']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5100400779', 'display_name': 'Min Li', 'orcid': 'https://orcid.org/0000-0003-2959-9080'}, 'institutions': [{'id': 'https://openalex.org/I4210158139', 'display_name': 'Qingdao Institute of Bioenergy and Bioprocess Technology', 'ror': 'https://ror.org/05h3vcy91', 'country_code': 'CN', 'type': 'facility', 'lineage': ['https://openalex.org/I19820366', 'https://openalex.org/I4210158139']}, {'id': 'https://openalex.org/I19820366', 'display_name': 'Chinese Academy of Sciences', 'ror': 'https://ror.org/034t30j35', 'country_code': 'CN', 'type': 'government', 'lineage': ['https://openalex.org/I19820366']}], 'countries': ['CN'], 'is_corresponding': False, 'raw_author_name': 'Min Li', 'raw_affiliation_strings': ['Shandong Institute of Energy Research, Qingdao, China', 'Single-Cell Center, CAS Key Laboratory of Biofuels and Shandong Key Laboratory of Energy Genetics, Qingdao Institute of BioEnergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, China'], 'affiliations': [{'raw_affiliation_string': 'Shandong Institute of Energy Research, Qingdao, China', 'institution_ids': []}, {'raw_affiliation_string': 'Single-Cell Center, CAS Key Laboratory of Biofuels and Shandong Key Laboratory of Energy Genetics, Qingdao Institute of BioEnergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, China', 'institution_ids': ['https://openalex.org/I4210158139', 'https://openalex.org/I19820366']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5004976041', 'display_name': 'Zhenkun Zhang', 'orcid': 'https://orcid.org/0000-0002-3480-2381'}, 'institutions': [{'id': 'https://openalex.org/I59028903', 'display_name': 'Ocean University of China', 'ror': 'https://ror.org/04rdtx186', 'country_code': 'CN', 'type': 'education', 'lineage': ['https://openalex.org/I59028903']}], 'countries': ['CN'], 'is_corresponding': False, 'raw_author_name': 'Zhenkun Zhang', 'raw_affiliation_strings': ['Key Laboratory of Marine Drugs, the Ministry of Education of China, School of Medicine and Pharmacy, Ocean University of China, Qingdao, China'], 'affiliations': [{'raw_affiliation_string': 'Key Laboratory of Marine Drugs, the Ministry of Education of China, School of Medicine and Pharmacy, Ocean University of China, Qingdao, China', 'institution_ids': ['https://openalex.org/I59028903']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5100758654', 'display_name': 'Xiaohan Liu', 'orcid': 'https://orcid.org/0000-0001-9987-2260'}, 'institutions': [{'id': 'https://openalex.org/I59028903', 'display_name': 'Ocean University of China', 'ror': 'https://ror.org/04rdtx186', 'country_code': 'CN', 'type': 'education', 'lineage': ['https://openalex.org/I59028903']}], 'countries': ['CN'], 'is_corresponding': False, 'raw_author_name': 'Xiaohan Liu', 'raw_affiliation_strings': ['Key Laboratory of Marine Drugs, the Ministry of Education of China, School of Medicine and Pharmacy, Ocean University of China, Qingdao, China'], 'affiliations': [{'raw_affiliation_string': 'Key Laboratory of Marine Drugs, the Ministry of Education of China, School of Medicine and Pharmacy, Ocean University of China, Qingdao, China', 'institution_ids': ['https://openalex.org/I59028903']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5081633974', 'display_name': 'Jian Xu', 'orcid': 'https://orcid.org/0000-0002-0548-8477'}, 'institutions': [{'id': 'https://openalex.org/I4210158139', 'display_name': 'Qingdao Institute of Bioenergy and Bioprocess Technology', 'ror': 'https://ror.org/05h3vcy91', 'country_code': 'CN', 'type': 'facility', 'lineage': ['https://openalex.org/I19820366', 'https://openalex.org/I4210158139']}, {'id': 'https://openalex.org/I19820366', 'display_name': 'Chinese Academy of Sciences', 'ror': 'https://ror.org/034t30j35', 'country_code': 'CN', 'type': 'government', 'lineage': ['https://openalex.org/I19820366']}], 'countries': ['CN'], 'is_corresponding': False, 'raw_author_name': 'Jian Xu', 'raw_affiliation_strings': ['Shandong Institute of Energy Research, Qingdao, China', 'Single-Cell Center, CAS Key Laboratory of Biofuels and Shandong Key Laboratory of Energy Genetics, Qingdao Institute of BioEnergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, China'], 'affiliations': [{'raw_affiliation_string': 'Single-Cell Center, CAS Key Laboratory of Biofuels and Shandong Key Laboratory of Energy Genetics, Qingdao Institute of BioEnergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, China', 'institution_ids': ['https://openalex.org/I4210158139', 'https://openalex.org/I19820366']}, {'raw_affiliation_string': 'Shandong Institute of Energy Research, Qingdao, China', 'institution_ids': []}]}, {'author_position': 'last', 'author': {'id': 'https://openalex.org/A5042843762', 'display_name': 'Xiaoquan Su', 'orcid': 'https://orcid.org/0000-0003-2144-1991'}, 'institutions': [{'id': 'https://openalex.org/I4210158139', 'display_name': 'Qingdao Institute of Bioenergy and Bioprocess Technology', 'ror': 'https://ror.org/05h3vcy91', 'country_code': 'CN', 'type': 'facility', 'lineage': ['https://openalex.org/I19820366', 'https://openalex.org/I4210158139']}, {'id': 'https://openalex.org/I19820366', 'display_name': 'Chinese Academy of Sciences', 'ror': 'https://ror.org/034t30j35', 'country_code': 'CN', 'type': 'government', 'lineage': ['https://openalex.org/I19820366']}], 'countries': ['CN'], 'is_corresponding': False, 'raw_author_name': 'Xiaoquan Su', 'raw_affiliation_strings': ['College of Computer Science and Technology, Qingdao University, Qingdao, China', 'Shandong Institute of Energy Research, Qingdao, China', 'Single-Cell Center, CAS Key Laboratory of Biofuels and Shandong Key Laboratory of Energy Genetics, Qingdao Institute of BioEnergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, China'], 'affiliations': [{'raw_affiliation_string': 'Single-Cell Center, CAS Key Laboratory of Biofuels and Shandong Key Laboratory of Energy Genetics, Qingdao Institute of BioEnergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, China', 'institution_ids': ['https://openalex.org/I4210158139', 'https://openalex.org/I19820366']}, {'raw_affiliation_string': 'College of Computer Science and Technology, Qingdao University, Qingdao, China', 'institution_ids': []}, {'raw_affiliation_string': 'Shandong Institute of Energy Research, Qingdao, China', 'institution_ids': []}]}], 'institution_assertions': [], 'countries_distinct_count': 1, 'institutions_distinct_count': 4, 'corresponding_author_ids': [], 'corresponding_institution_ids': [], 'apc_list': {'value': 3500, 'currency': 'USD', 'value_usd': 3500, 'provenance': 'doaj'}, 'apc_paid': {'value': 3500, 'currency': 'USD', 'value_usd': 3500, 'provenance': 'doaj'}, 'fwci': 1.727, 'has_fulltext': False, 'cited_by_count': 19, 'citation_normalized_percentile': {'value': 0.999982, 'is_in_top_1_percent': True, 'is_in_top_10_percent': True}, 'cited_by_percentile_year': {'min': 93, 'max': 94}, 'biblio': {'volume': '6', 'issue': '1', 'first_page': None, 'last_page': None}, 'is_retracted': False, 'is_paratext': False, 'primary_topic': {'id': 'https://openalex.org/T10066', 'display_name': 'Diversity and Function of Gut Microbiome', 'score': 0.9989, 'subfield': {'id': 'https://openalex.org/subfields/1312', 'display_name': 'Molecular Biology'}, 'field': {'id': 'https://openalex.org/fields/13', 'display_name': 'Biochemistry, Genetics and Molecular Biology'}, 'domain': {'id': 'https://openalex.org/domains/1', 'display_name': 'Life Sciences'}}, 'topics': [{'id': 'https://openalex.org/T10066', 'display_name': 'Diversity and Function of Gut Microbiome', 'score': 0.9989, 'subfield': {'id': 'https://openalex.org/subfields/1312', 'display_name': 'Molecular Biology'}, 'field': {'id': 'https://openalex.org/fields/13', 'display_name': 'Biochemistry, Genetics and Molecular Biology'}, 'domain': {'id': 'https://openalex.org/domains/1', 'display_name': 'Life Sciences'}}, {'id': 'https://openalex.org/T10015', 'display_name': 'RNA Sequencing Data Analysis', 'score': 0.9959, 'subfield': {'id': 'https://openalex.org/subfields/1312', 'display_name': 'Molecular Biology'}, 'field': {'id': 'https://openalex.org/fields/13', 'display_name': 'Biochemistry, Genetics and Molecular Biology'}, 'domain': {'id': 'https://openalex.org/domains/1', 'display_name': 'Life Sciences'}}, {'id': 'https://openalex.org/T11791', 'display_name': 'Marine Microbial Diversity and Biogeography', 'score': 0.9844, 'subfield': {'id': 'https://openalex.org/subfields/2303', 'display_name': 'Ecology'}, 'field': {'id': 'https://openalex.org/fields/23', 'display_name': 'Environmental Science'}, 'domain': {'id': 'https://openalex.org/domains/3', 'display_name': 'Physical Sciences'}}], 'keywords': [{'id': 'https://openalex.org/keywords/microbial-ecology', 'display_name': 'Microbial Ecology', 'score': 0.555533}, {'id': 'https://openalex.org/keywords/microbial-biogeography', 'display_name': 'Microbial Biogeography', 'score': 0.537676}], 'concepts': [{'id': 'https://openalex.org/C143121216', 'wikidata': 'https://www.wikidata.org/wiki/Q1330402', 'display_name': 'Microbiome', 'level': 2, 'score': 0.9688238}, {'id': 'https://openalex.org/C70721500', 'wikidata': 'https://www.wikidata.org/wiki/Q177005', 'display_name': 'Computational biology', 'level': 1, 'score': 0.49294496}, {'id': 'https://openalex.org/C91478284', 'wikidata': 'https://www.wikidata.org/wiki/Q6623796', 'display_name': 'Human microbiome', 'level': 3, 'score': 0.46251336}, {'id': 'https://openalex.org/C41008148', 'wikidata': 'https://www.wikidata.org/wiki/Q21198', 'display_name': 'Computer science', 'level': 0, 'score': 0.44379556}, {'id': 'https://openalex.org/C86803240', 'wikidata': 'https://www.wikidata.org/wiki/Q420', 'display_name': 'Biology', 'level': 0, 'score': 0.3381529}, {'id': 'https://openalex.org/C60644358', 'wikidata': 'https://www.wikidata.org/wiki/Q128570', 'display_name': 'Bioinformatics', 'level': 1, 'score': 0.32131505}], 'mesh': [], 'locations_count': 3, 'locations': [{'is_oa': True, 'landing_page_url': 'https://doi.org/10.1128/msystems.00943-20', 'pdf_url': None, 'source': {'id': 'https://openalex.org/S4210181942', 'display_name': 'mSystems', 'issn_l': '2379-5077', 'issn': ['2379-5077'], 'is_oa': True, 'is_in_doaj': True, 'is_core': True, 'host_organization': 'https://openalex.org/P4310320263', 'host_organization_name': 'American Society for Microbiology', 'host_organization_lineage': ['https://openalex.org/P4310320263'], 'host_organization_lineage_names': ['American Society for Microbiology'], 'type': 'journal'}, 'license': 'cc-by', 'license_id': 'https://openalex.org/licenses/cc-by', 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, {'is_oa': False, 'landing_page_url': 'https://doaj.org/article/90907e12b77e4f55bfb38c7fae2654a6', 'pdf_url': None, 'source': {'id': 'https://openalex.org/S4306401280', 'display_name': 'DOAJ (DOAJ: Directory of Open Access Journals)', 'issn_l': None, 'issn': None, 'is_oa': True, 'is_in_doaj': False, 'is_core': False, 'host_organization': None, 'host_organization_name': None, 'host_organization_lineage': [], 'host_organization_lineage_names': [], 'type': 'repository'}, 'license': None, 'license_id': None, 'version': None, 'is_accepted': False, 'is_published': False}, {'is_oa': True, 'landing_page_url': 'https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7820668', 'pdf_url': None, 'source': {'id': 'https://openalex.org/S2764455111', 'display_name': 'PubMed Central', 'issn_l': None, 'issn': None, 'is_oa': True, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I1299303238', 'host_organization_name': 'National Institutes of Health', 'host_organization_lineage': ['https://openalex.org/I1299303238'], 'host_organization_lineage_names': ['National Institutes of Health'], 'type': 'repository'}, 'license': None, 'license_id': None, 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}], 'best_oa_location': {'is_oa': True, 'landing_page_url': 'https://doi.org/10.1128/msystems.00943-20', 'pdf_url': None, 'source': {'id': 'https://openalex.org/S4210181942', 'display_name': 'mSystems', 'issn_l': '2379-5077', 'issn': ['2379-5077'], 'is_oa': True, 'is_in_doaj': True, 'is_core': True, 'host_organization': 'https://openalex.org/P4310320263', 'host_organization_name': 'American Society for Microbiology', 'host_organization_lineage': ['https://openalex.org/P4310320263'], 'host_organization_lineage_names': ['American Society for Microbiology'], 'type': 'journal'}, 'license': 'cc-by', 'license_id': 'https://openalex.org/licenses/cc-by', 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, 'sustainable_development_goals': [], 'grants': [{'funder': 'https://openalex.org/F4320321001', 'funder_display_name': 'National Natural Science Foundation of China', 'award_id': '32070086'}, {'funder': 'https://openalex.org/F4320321001', 'funder_display_name': 'National Natural Science Foundation of China', 'award_id': '31771463'}, {'funder': 'https://openalex.org/F4320324174', 'funder_display_name': 'Natural Science Foundation of Shandong Province', 'award_id': 'ZR2016QZ004'}], 'datasets': [], 'versions': [], 'referenced_works_count': 36, 'referenced_works': ['https://openalex.org/W1599047304', 'https://openalex.org/W1703384511', 'https://openalex.org/W1860189396', 'https://openalex.org/W1964027278', 'https://openalex.org/W1981029671', 'https://openalex.org/W1998767819', 'https://openalex.org/W2008350594', 'https://openalex.org/W2072970694', 'https://openalex.org/W2085926377', 'https://openalex.org/W2110300022', 'https://openalex.org/W2130725058', 'https://openalex.org/W2148168721', 'https://openalex.org/W2154026962', 'https://openalex.org/W2154736508', 'https://openalex.org/W2165446840', 'https://openalex.org/W2188930066', 'https://openalex.org/W2190655222', 'https://openalex.org/W2576317572', 'https://openalex.org/W2588997555', 'https://openalex.org/W2766358903', 'https://openalex.org/W2766822634', 'https://openalex.org/W2766903152', 'https://openalex.org/W2794407684', 'https://openalex.org/W2892206041', 'https://openalex.org/W2895532240', 'https://openalex.org/W2897611961', 'https://openalex.org/W2900546243', 'https://openalex.org/W2903406988', 'https://openalex.org/W2904155504', 'https://openalex.org/W2925318921', 'https://openalex.org/W2972246166', 'https://openalex.org/W2990249310', 'https://openalex.org/W2994601222', 'https://openalex.org/W3010965312', 'https://openalex.org/W3030441098', 'https://openalex.org/W3046420150'], 'related_works': ['https://openalex.org/W4312678993', 'https://openalex.org/W3137578603', 'https://openalex.org/W2965705087', 'https://openalex.org/W2775721267', 'https://openalex.org/W2595711621', 'https://openalex.org/W2114605673', 'https://openalex.org/W2069773272', 'https://openalex.org/W2043102924', 'https://openalex.org/W1968369492', 'https://openalex.org/W1542636957'], 'abstract_inverted_index': {'A': [0], 'search-based': [1], 'strategy': [2], 'is': [3], 'useful': [4], 'for': [5, 42], 'large-scale': [6], 'mining': [7], 'of': [8, 17, 55], 'microbiome': [9, 19, 26, 39, 49], 'data': [10, 20, 50], 'sets,': [11], 'such': [12], 'as': [13], 'a': [14, 38], 'bird’s-eye': [15], 'view': [16], 'the': [18, 47, 53], 'space': [21], 'and': [22], 'disease': [23], 'diagnosis': [24], 'via': [25], 'big': [27], 'data.': [28], 'Here,': [29], 'we': [30], 'introduce': [31], 'Microbiome': [32], 'Search': [33], 'Engine': [34], '2': [35], '(MSE': [36], '2),': [37], 'database': [40], 'platform': [41], 'searching': [43], 'query': [44], 'microbiomes': [45], 'against': [46], 'existing': [48], 'sets': [51], 'on': [52], 'basis': [54], 'their': [56], 'similarity': [57], 'in': [58], 'taxonomic': [59], 'structure': [60], 'or': [61], 'functional': [62], 'profile.': [63]}, 'cited_by_api_url': 'https://api.openalex.org/works?filter=cites:W3121185202', 'counts_by_year': [{'year': 2024, 'cited_by_count': 4}, {'year': 2023, 'cited_by_count': 5}, {'year': 2022, 'cited_by_count': 6}, {'year': 2021, 'cited_by_count': 4}], 'updated_date': '2024-09-17T02:05:10.267795', 'created_date': '2021-02-01'}