Get quick answers to your questions about the article from our AI researcher chatbot
{'id': 'https://openalex.org/W2922357899', 'doi': 'https://doi.org/10.1186/s13068-019-1399-6', 'title': 'Prediction and characterization of promoters and ribosomal binding sites of Zymomonas mobilis in system biology era', 'display_name': 'Prediction and characterization of promoters and ribosomal binding sites of Zymomonas mobilis in system biology era', 'publication_year': 2019, 'publication_date': '2019-03-14', 'ids': {'openalex': 'https://openalex.org/W2922357899', 'doi': 'https://doi.org/10.1186/s13068-019-1399-6', 'mag': '2922357899', 'pmid': 'https://pubmed.ncbi.nlm.nih.gov/30911332', 'pmcid': 'https://www.ncbi.nlm.nih.gov/pmc/articles/6417218'}, 'language': 'en', 'primary_location': {'is_oa': True, 'landing_page_url': 'https://doi.org/10.1186/s13068-019-1399-6', 'pdf_url': 'https://biotechnologyforbiofuels.biomedcentral.com/track/pdf/10.1186/s13068-019-1399-6', 'source': {'id': 'https://openalex.org/S137860580', 'display_name': 'Biotechnology for Biofuels', 'issn_l': '1754-6834', 'issn': ['1754-6834'], 'is_oa': True, 'is_in_doaj': True, 'is_core': True, 'host_organization': 'https://openalex.org/P4310319900', 'host_organization_name': 'Springer Science+Business Media', 'host_organization_lineage': ['https://openalex.org/P4310319965', 'https://openalex.org/P4310319900'], 'host_organization_lineage_names': ['Springer Nature', 'Springer Science+Business Media'], 'type': 'journal'}, 'license': 'cc-by', 'license_id': 'https://openalex.org/licenses/cc-by', 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, 'type': 'article', 'type_crossref': 'journal-article', 'indexed_in': ['crossref', 'pubmed'], 'open_access': {'is_oa': True, 'oa_status': 'gold', 'oa_url': 'https://biotechnologyforbiofuels.biomedcentral.com/track/pdf/10.1186/s13068-019-1399-6', 'any_repository_has_fulltext': True}, 'authorships': [{'author_position': 'first', 'author': {'id': 'https://openalex.org/A5101738244', 'display_name': 'Yongfu Yang', 'orcid': 'https://orcid.org/0000-0001-6904-6590'}, 'institutions': [{'id': 'https://openalex.org/I75900474', 'display_name': 'Hubei University', 'ror': 'https://ror.org/03a60m280', 'country_code': 'CN', 'type': 'education', 'lineage': ['https://openalex.org/I75900474']}], 'countries': ['CN'], 'is_corresponding': False, 'raw_author_name': 'Yongfu Yang', 'raw_affiliation_strings': ['State Key Laboratory of Biocatalysis and Enzyme Engineering, Hubei Collaborative Innovation Center for Green Transformation of Bio-resources, Environmental Microbial Technology Center of Hubei Province, and School of Life Sciences, Hubei University, Wuhan, 430062, China'], 'affiliations': [{'raw_affiliation_string': 'State Key Laboratory of Biocatalysis and Enzyme Engineering, Hubei Collaborative Innovation Center for Green Transformation of Bio-resources, Environmental Microbial Technology Center of Hubei Province, and School of Life Sciences, Hubei University, Wuhan, 430062, China', 'institution_ids': ['https://openalex.org/I75900474']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5072268281', 'display_name': 'Wei Shen', 'orcid': 'https://orcid.org/0000-0002-9991-2100'}, 'institutions': [{'id': 'https://openalex.org/I75900474', 'display_name': 'Hubei University', 'ror': 'https://ror.org/03a60m280', 'country_code': 'CN', 'type': 'education', 'lineage': ['https://openalex.org/I75900474']}], 'countries': ['CN'], 'is_corresponding': False, 'raw_author_name': 'Wei Shen', 'raw_affiliation_strings': ['State Key Laboratory of Biocatalysis and Enzyme Engineering, Hubei Collaborative Innovation Center for Green Transformation of Bio-resources, Environmental Microbial Technology Center of Hubei Province, and School of Life Sciences, Hubei University, Wuhan, 430062, China'], 'affiliations': [{'raw_affiliation_string': 'State Key Laboratory of Biocatalysis and Enzyme Engineering, Hubei Collaborative Innovation Center for Green Transformation of Bio-resources, Environmental Microbial Technology Center of Hubei Province, and School of Life Sciences, Hubei University, Wuhan, 430062, China', 'institution_ids': ['https://openalex.org/I75900474']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5080616254', 'display_name': 'Ju Huang', 'orcid': 'https://orcid.org/0000-0003-2254-6621'}, 'institutions': [{'id': 'https://openalex.org/I75900474', 'display_name': 'Hubei University', 'ror': 'https://ror.org/03a60m280', 'country_code': 'CN', 'type': 'education', 'lineage': ['https://openalex.org/I75900474']}], 'countries': ['CN'], 'is_corresponding': False, 'raw_author_name': 'Ju Huang', 'raw_affiliation_strings': ['State Key Laboratory of Biocatalysis and Enzyme Engineering, Hubei Collaborative Innovation Center for Green Transformation of Bio-resources, Environmental Microbial Technology Center of Hubei Province, and School of Life Sciences, Hubei University, Wuhan, 430062, China'], 'affiliations': [{'raw_affiliation_string': 'State Key Laboratory of Biocatalysis and Enzyme Engineering, Hubei Collaborative Innovation Center for Green Transformation of Bio-resources, Environmental Microbial Technology Center of Hubei Province, and School of Life Sciences, Hubei University, Wuhan, 430062, China', 'institution_ids': ['https://openalex.org/I75900474']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5016865064', 'display_name': 'Runxia Li', 'orcid': 'https://orcid.org/0000-0001-9448-7224'}, 'institutions': [{'id': 'https://openalex.org/I75900474', 'display_name': 'Hubei University', 'ror': 'https://ror.org/03a60m280', 'country_code': 'CN', 'type': 'education', 'lineage': ['https://openalex.org/I75900474']}], 'countries': ['CN'], 'is_corresponding': False, 'raw_author_name': 'Runxia Li', 'raw_affiliation_strings': ['State Key Laboratory of Biocatalysis and Enzyme Engineering, Hubei Collaborative Innovation Center for Green Transformation of Bio-resources, Environmental Microbial Technology Center of Hubei Province, and School of Life Sciences, Hubei University, Wuhan, 430062, China'], 'affiliations': [{'raw_affiliation_string': 'State Key Laboratory of Biocatalysis and Enzyme Engineering, Hubei Collaborative Innovation Center for Green Transformation of Bio-resources, Environmental Microbial Technology Center of Hubei Province, and School of Life Sciences, Hubei University, Wuhan, 430062, China', 'institution_ids': ['https://openalex.org/I75900474']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5030481635', 'display_name': 'Yubei Xiao', 'orcid': None}, 'institutions': [{'id': 'https://openalex.org/I75900474', 'display_name': 'Hubei University', 'ror': 'https://ror.org/03a60m280', 'country_code': 'CN', 'type': 'education', 'lineage': ['https://openalex.org/I75900474']}], 'countries': ['CN'], 'is_corresponding': False, 'raw_author_name': 'Yubei Xiao', 'raw_affiliation_strings': ['State Key Laboratory of Biocatalysis and Enzyme Engineering, Hubei Collaborative Innovation Center for Green Transformation of Bio-resources, Environmental Microbial Technology Center of Hubei Province, and School of Life Sciences, Hubei University, Wuhan, 430062, China'], 'affiliations': [{'raw_affiliation_string': 'State Key Laboratory of Biocatalysis and Enzyme Engineering, Hubei Collaborative Innovation Center for Green Transformation of Bio-resources, Environmental Microbial Technology Center of Hubei Province, and School of Life Sciences, Hubei University, Wuhan, 430062, China', 'institution_ids': ['https://openalex.org/I75900474']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5054441428', 'display_name': 'Hui Wei', 'orcid': 'https://orcid.org/0000-0002-3550-188X'}, 'institutions': [{'id': 'https://openalex.org/I1297288678', 'display_name': 'National Renewable Energy Laboratory', 'ror': 'https://ror.org/036266993', 'country_code': 'US', 'type': 'facility', 'lineage': ['https://openalex.org/I1297288678', 'https://openalex.org/I1330989302', 'https://openalex.org/I2800842121']}], 'countries': ['US'], 'is_corresponding': False, 'raw_author_name': 'Hui Wei', 'raw_affiliation_strings': ['Biosciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA'], 'affiliations': [{'raw_affiliation_string': 'Biosciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA', 'institution_ids': ['https://openalex.org/I1297288678']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5017066824', 'display_name': 'Yat‐Chen Chou', 'orcid': 'https://orcid.org/0000-0001-9203-6075'}, 'institutions': [{'id': 'https://openalex.org/I1297288678', 'display_name': 'National Renewable Energy Laboratory', 'ror': 'https://ror.org/036266993', 'country_code': 'US', 'type': 'facility', 'lineage': ['https://openalex.org/I1297288678', 'https://openalex.org/I1330989302', 'https://openalex.org/I2800842121']}], 'countries': ['US'], 'is_corresponding': False, 'raw_author_name': 'Yat-Chen Chou', 'raw_affiliation_strings': ['National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA'], 'affiliations': [{'raw_affiliation_string': 'National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA', 'institution_ids': ['https://openalex.org/I1297288678']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5100402962', 'display_name': 'Min Zhang', 'orcid': 'https://orcid.org/0000-0002-9015-2184'}, 'institutions': [{'id': 'https://openalex.org/I1297288678', 'display_name': 'National Renewable Energy Laboratory', 'ror': 'https://ror.org/036266993', 'country_code': 'US', 'type': 'facility', 'lineage': ['https://openalex.org/I1297288678', 'https://openalex.org/I1330989302', 'https://openalex.org/I2800842121']}], 'countries': ['US'], 'is_corresponding': False, 'raw_author_name': 'Min Zhang', 'raw_affiliation_strings': ['Biosciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA'], 'affiliations': [{'raw_affiliation_string': 'Biosciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA', 'institution_ids': ['https://openalex.org/I1297288678']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5006644300', 'display_name': 'Michael E. Himmel', 'orcid': 'https://orcid.org/0000-0003-3707-0603'}, 'institutions': [{'id': 'https://openalex.org/I1297288678', 'display_name': 'National Renewable Energy Laboratory', 'ror': 'https://ror.org/036266993', 'country_code': 'US', 'type': 'facility', 'lineage': ['https://openalex.org/I1297288678', 'https://openalex.org/I1330989302', 'https://openalex.org/I2800842121']}], 'countries': ['US'], 'is_corresponding': False, 'raw_author_name': 'Michael E. Himmel', 'raw_affiliation_strings': ['Biosciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA'], 'affiliations': [{'raw_affiliation_string': 'Biosciences Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA', 'institution_ids': ['https://openalex.org/I1297288678']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5079338602', 'display_name': 'Shouwen Chen', 'orcid': 'https://orcid.org/0000-0003-3503-4561'}, 'institutions': [{'id': 'https://openalex.org/I75900474', 'display_name': 'Hubei University', 'ror': 'https://ror.org/03a60m280', 'country_code': 'CN', 'type': 'education', 'lineage': ['https://openalex.org/I75900474']}], 'countries': ['CN'], 'is_corresponding': False, 'raw_author_name': 'Shouwen Chen', 'raw_affiliation_strings': ['State Key Laboratory of Biocatalysis and Enzyme Engineering, Hubei Collaborative Innovation Center for Green Transformation of Bio-resources, Environmental Microbial Technology Center of Hubei Province, and School of Life Sciences, Hubei University, Wuhan, 430062, China'], 'affiliations': [{'raw_affiliation_string': 'State Key Laboratory of Biocatalysis and Enzyme Engineering, Hubei Collaborative Innovation Center for Green Transformation of Bio-resources, Environmental Microbial Technology Center of Hubei Province, and School of Life Sciences, Hubei University, Wuhan, 430062, China', 'institution_ids': ['https://openalex.org/I75900474']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5100421634', 'display_name': 'Yi Li', 'orcid': 'https://orcid.org/0000-0002-7835-6985'}, 'institutions': [{'id': 'https://openalex.org/I75900474', 'display_name': 'Hubei University', 'ror': 'https://ror.org/03a60m280', 'country_code': 'CN', 'type': 'education', 'lineage': ['https://openalex.org/I75900474']}], 'countries': ['CN'], 'is_corresponding': False, 'raw_author_name': 'Li Yi', 'raw_affiliation_strings': ['State Key Laboratory of Biocatalysis and Enzyme Engineering, Hubei Collaborative Innovation Center for Green Transformation of Bio-resources, Environmental Microbial Technology Center of Hubei Province, and School of Life Sciences, Hubei University, Wuhan, 430062, China'], 'affiliations': [{'raw_affiliation_string': 'State Key Laboratory of Biocatalysis and Enzyme Engineering, Hubei Collaborative Innovation Center for Green Transformation of Bio-resources, Environmental Microbial Technology Center of Hubei Province, and School of Life Sciences, Hubei University, Wuhan, 430062, China', 'institution_ids': ['https://openalex.org/I75900474']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5008463603', 'display_name': 'Lixin Ma', 'orcid': 'https://orcid.org/0000-0002-4938-4741'}, 'institutions': [{'id': 'https://openalex.org/I75900474', 'display_name': 'Hubei University', 'ror': 'https://ror.org/03a60m280', 'country_code': 'CN', 'type': 'education', 'lineage': ['https://openalex.org/I75900474']}], 'countries': ['CN'], 'is_corresponding': False, 'raw_author_name': 'Lixin Ma', 'raw_affiliation_strings': ['State Key Laboratory of Biocatalysis and Enzyme Engineering, Hubei Collaborative Innovation Center for Green Transformation of Bio-resources, Environmental Microbial Technology Center of Hubei Province, and School of Life Sciences, Hubei University, Wuhan, 430062, China'], 'affiliations': [{'raw_affiliation_string': 'State Key Laboratory of Biocatalysis and Enzyme Engineering, Hubei Collaborative Innovation Center for Green Transformation of Bio-resources, Environmental Microbial Technology Center of Hubei Province, and School of Life Sciences, Hubei University, Wuhan, 430062, China', 'institution_ids': ['https://openalex.org/I75900474']}]}, {'author_position': 'last', 'author': {'id': 'https://openalex.org/A5078936253', 'display_name': 'Shihui Yang', 'orcid': 'https://orcid.org/0000-0002-9394-9148'}, 'institutions': [{'id': 'https://openalex.org/I75900474', 'display_name': 'Hubei University', 'ror': 'https://ror.org/03a60m280', 'country_code': 'CN', 'type': 'education', 'lineage': ['https://openalex.org/I75900474']}], 'countries': ['CN'], 'is_corresponding': False, 'raw_author_name': 'Shihui Yang', 'raw_affiliation_strings': ['State Key Laboratory of Biocatalysis and Enzyme Engineering, Hubei Collaborative Innovation Center for Green Transformation of Bio-resources, Environmental Microbial Technology Center of Hubei Province, and School of Life Sciences, Hubei University, Wuhan, 430062, China'], 'affiliations': [{'raw_affiliation_string': 'State Key Laboratory of Biocatalysis and Enzyme Engineering, Hubei Collaborative Innovation Center for Green Transformation of Bio-resources, Environmental Microbial Technology Center of Hubei Province, and School of Life Sciences, Hubei University, Wuhan, 430062, China', 'institution_ids': ['https://openalex.org/I75900474']}]}], 'institution_assertions': [], 'countries_distinct_count': 2, 'institutions_distinct_count': 2, 'corresponding_author_ids': [], 'corresponding_institution_ids': [], 'apc_list': {'value': 1990, 'currency': 'GBP', 'value_usd': 2440, 'provenance': 'doaj'}, 'apc_paid': {'value': 1990, 'currency': 'GBP', 'value_usd': 2440, 'provenance': 'doaj'}, 'fwci': 5.668, 'has_fulltext': True, 'fulltext_origin': 'pdf', 'cited_by_count': 85, 'citation_normalized_percentile': {'value': 0.999983, 'is_in_top_1_percent': True, 'is_in_top_10_percent': True}, 'cited_by_percentile_year': {'min': 98, 'max': 99}, 'biblio': {'volume': '12', 'issue': '1', 'first_page': None, 'last_page': None}, 'is_retracted': False, 'is_paratext': False, 'primary_topic': {'id': 'https://openalex.org/T10932', 'display_name': 'Microbial Metabolic Engineering and Bioproduction', 'score': 0.9995, 'subfield': {'id': 'https://openalex.org/subfields/1312', 'display_name': 'Molecular Biology'}, 'field': {'id': 'https://openalex.org/fields/13', 'display_name': 'Biochemistry, Genetics and Molecular Biology'}, 'domain': {'id': 'https://openalex.org/domains/1', 'display_name': 'Life Sciences'}}, 'topics': [{'id': 'https://openalex.org/T10932', 'display_name': 'Microbial Metabolic Engineering and Bioproduction', 'score': 0.9995, 'subfield': {'id': 'https://openalex.org/subfields/1312', 'display_name': 'Molecular Biology'}, 'field': {'id': 'https://openalex.org/fields/13', 'display_name': 'Biochemistry, Genetics and Molecular Biology'}, 'domain': {'id': 'https://openalex.org/domains/1', 'display_name': 'Life Sciences'}}, {'id': 'https://openalex.org/T10120', 'display_name': 'Bacterial Genetics and Biotechnology', 'score': 0.9967, 'subfield': {'id': 'https://openalex.org/subfields/1311', 'display_name': 'Genetics'}, 'field': {'id': 'https://openalex.org/fields/13', 'display_name': 'Biochemistry, Genetics and Molecular Biology'}, 'domain': {'id': 'https://openalex.org/domains/1', 'display_name': 'Life Sciences'}}, {'id': 'https://openalex.org/T10521', 'display_name': 'RNA and protein synthesis mechanisms', 'score': 0.9952, 'subfield': {'id': 'https://openalex.org/subfields/1312', 'display_name': 'Molecular Biology'}, 'field': {'id': 'https://openalex.org/fields/13', 'display_name': 'Biochemistry, Genetics and Molecular Biology'}, 'domain': {'id': 'https://openalex.org/domains/1', 'display_name': 'Life Sciences'}}], 'keywords': [{'id': 'https://openalex.org/keywords/zymomonas-mobilis', 'display_name': 'Zymomonas mobilis', 'score': 0.7922822}, {'id': 'https://openalex.org/keywords/gene-prediction', 'display_name': 'Gene prediction', 'score': 0.47674286}, {'id': 'https://openalex.org/keywords/synthetic-biology', 'display_name': 'Synthetic Biology', 'score': 0.4722069}], 'concepts': [{'id': 'https://openalex.org/C101762097', 'wikidata': 'https://www.wikidata.org/wiki/Q224093', 'display_name': 'Promoter', 'level': 4, 'score': 0.8456856}, {'id': 'https://openalex.org/C2780604136', 'wikidata': 'https://www.wikidata.org/wiki/Q245744', 'display_name': 'Zymomonas mobilis', 'level': 4, 'score': 0.7922822}, {'id': 'https://openalex.org/C161733203', 'wikidata': 'https://www.wikidata.org/wiki/Q911828', 'display_name': 'Reporter gene', 'level': 4, 'score': 0.75562143}, {'id': 'https://openalex.org/C70721500', 'wikidata': 'https://www.wikidata.org/wiki/Q177005', 'display_name': 'Computational biology', 'level': 1, 'score': 0.58390164}, {'id': 'https://openalex.org/C104317684', 'wikidata': 'https://www.wikidata.org/wiki/Q7187', 'display_name': 'Gene', 'level': 2, 'score': 0.57759124}, {'id': 'https://openalex.org/C86803240', 'wikidata': 'https://www.wikidata.org/wiki/Q420', 'display_name': 'Biology', 'level': 0, 'score': 0.55325544}, {'id': 'https://openalex.org/C105565629', 'wikidata': 'https://www.wikidata.org/wiki/Q1248292', 'display_name': 'Gene prediction', 'level': 4, 'score': 0.47674286}, {'id': 'https://openalex.org/C191908910', 'wikidata': 'https://www.wikidata.org/wiki/Q862838', 'display_name': 'Synthetic biology', 'level': 2, 'score': 0.4722069}, {'id': 'https://openalex.org/C54355233', 'wikidata': 'https://www.wikidata.org/wiki/Q7162', 'display_name': 'Genetics', 'level': 1, 'score': 0.39112544}, {'id': 'https://openalex.org/C150194340', 'wikidata': 'https://www.wikidata.org/wiki/Q26972', 'display_name': 'Gene expression', 'level': 3, 'score': 0.3669818}, {'id': 'https://openalex.org/C150903083', 'wikidata': 'https://www.wikidata.org/wiki/Q7108', 'display_name': 'Biotechnology', 'level': 1, 'score': 0.24179173}, {'id': 'https://openalex.org/C141231307', 'wikidata': 'https://www.wikidata.org/wiki/Q7020', 'display_name': 'Genome', 'level': 3, 'score': 0.11277667}, {'id': 'https://openalex.org/C65183824', 'wikidata': 'https://www.wikidata.org/wiki/Q194361', 'display_name': 'Ethanol fuel', 'level': 3, 'score': 0.08034262}, {'id': 'https://openalex.org/C53991642', 'wikidata': 'https://www.wikidata.org/wiki/Q128991', 'display_name': 'Biofuel', 'level': 2, 'score': 0.0}], 'mesh': [], 'locations_count': 5, 'locations': [{'is_oa': True, 'landing_page_url': 'https://doi.org/10.1186/s13068-019-1399-6', 'pdf_url': 'https://biotechnologyforbiofuels.biomedcentral.com/track/pdf/10.1186/s13068-019-1399-6', 'source': {'id': 'https://openalex.org/S137860580', 'display_name': 'Biotechnology for Biofuels', 'issn_l': '1754-6834', 'issn': ['1754-6834'], 'is_oa': True, 'is_in_doaj': True, 'is_core': True, 'host_organization': 'https://openalex.org/P4310319900', 'host_organization_name': 'Springer Science+Business Media', 'host_organization_lineage': ['https://openalex.org/P4310319965', 'https://openalex.org/P4310319900'], 'host_organization_lineage_names': ['Springer Nature', 'Springer Science+Business Media'], 'type': 'journal'}, 'license': 'cc-by', 'license_id': 'https://openalex.org/licenses/cc-by', 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, {'is_oa': True, 'landing_page_url': 'https://www.osti.gov/biblio/1506610', 'pdf_url': 'https://www.nrel.gov/docs/fy19osti/73636.pdf', 'source': {'id': 'https://openalex.org/S4306402487', 'display_name': 'OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)', 'issn_l': None, 'issn': None, 'is_oa': True, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I139351228', 'host_organization_name': 'Office of Scientific and Technical Information', 'host_organization_lineage': ['https://openalex.org/I139351228'], 'host_organization_lineage_names': ['Office of Scientific and Technical Information'], 'type': 'repository'}, 'license': 'other-oa', 'license_id': 'https://openalex.org/licenses/other-oa', 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, {'is_oa': True, 'landing_page_url': 'https://europepmc.org/articles/pmc6417218', 'pdf_url': 'https://europepmc.org/articles/pmc6417218?pdf=render', 'source': {'id': 'https://openalex.org/S4306400806', 'display_name': 'Europe PMC (PubMed Central)', 'issn_l': None, 'issn': None, 'is_oa': True, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I1303153112', 'host_organization_name': 'European Bioinformatics Institute', 'host_organization_lineage': ['https://openalex.org/I1303153112'], 'host_organization_lineage_names': ['European Bioinformatics Institute'], 'type': 'repository'}, 'license': 'cc-by', 'license_id': 'https://openalex.org/licenses/cc-by', 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, {'is_oa': True, 'landing_page_url': 'https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6417218', 'pdf_url': None, 'source': {'id': 'https://openalex.org/S2764455111', 'display_name': 'PubMed Central', 'issn_l': None, 'issn': None, 'is_oa': True, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I1299303238', 'host_organization_name': 'National Institutes of Health', 'host_organization_lineage': ['https://openalex.org/I1299303238'], 'host_organization_lineage_names': ['National Institutes of Health'], 'type': 'repository'}, 'license': None, 'license_id': None, 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, {'is_oa': False, 'landing_page_url': 'https://pubmed.ncbi.nlm.nih.gov/30911332', 'pdf_url': None, 'source': {'id': 'https://openalex.org/S4306525036', 'display_name': 'PubMed', 'issn_l': None, 'issn': None, 'is_oa': False, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I1299303238', 'host_organization_name': 'National Institutes of Health', 'host_organization_lineage': ['https://openalex.org/I1299303238'], 'host_organization_lineage_names': ['National Institutes of Health'], 'type': 'repository'}, 'license': None, 'license_id': None, 'version': None, 'is_accepted': False, 'is_published': False}], 'best_oa_location': {'is_oa': True, 'landing_page_url': 'https://doi.org/10.1186/s13068-019-1399-6', 'pdf_url': 'https://biotechnologyforbiofuels.biomedcentral.com/track/pdf/10.1186/s13068-019-1399-6', 'source': {'id': 'https://openalex.org/S137860580', 'display_name': 'Biotechnology for Biofuels', 'issn_l': '1754-6834', 'issn': ['1754-6834'], 'is_oa': True, 'is_in_doaj': True, 'is_core': True, 'host_organization': 'https://openalex.org/P4310319900', 'host_organization_name': 'Springer Science+Business Media', 'host_organization_lineage': ['https://openalex.org/P4310319965', 'https://openalex.org/P4310319900'], 'host_organization_lineage_names': ['Springer Nature', 'Springer Science+Business Media'], 'type': 'journal'}, 'license': 'cc-by', 'license_id': 'https://openalex.org/licenses/cc-by', 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, 'sustainable_development_goals': [{'id': 'https://metadata.un.org/sdg/9', 'display_name': 'Industry, innovation and infrastructure', 'score': 0.43}], 'grants': [], 'datasets': ['https://openalex.org/W4394410199'], 'versions': [], 'referenced_works_count': 72, 'referenced_works': ['https://openalex.org/W1507632145', 'https://openalex.org/W1528486716', 'https://openalex.org/W1571210713', 'https://openalex.org/W1571307284', 'https://openalex.org/W1574721008', 'https://openalex.org/W1853626789', 'https://openalex.org/W1943554511', 'https://openalex.org/W1947111763', 'https://openalex.org/W1961031322', 'https://openalex.org/W1964429658', 'https://openalex.org/W1964502640', 'https://openalex.org/W1966749659', 'https://openalex.org/W1971439989', 'https://openalex.org/W1973814805', 'https://openalex.org/W1976129535', 'https://openalex.org/W1982234546', 'https://openalex.org/W1983046430', 'https://openalex.org/W1987202660', 'https://openalex.org/W1991482073', 'https://openalex.org/W2001585600', 'https://openalex.org/W2009580263', 'https://openalex.org/W2016066622', 'https://openalex.org/W2021099440', 'https://openalex.org/W2024424485', 'https://openalex.org/W2030702979', 'https://openalex.org/W2034558349', 'https://openalex.org/W2039808072', 'https://openalex.org/W2041815953', 'https://openalex.org/W2042299646', 'https://openalex.org/W2055109879', 'https://openalex.org/W2056128904', 'https://openalex.org/W2058559206', 'https://openalex.org/W2083870761', 'https://openalex.org/W2086760680', 'https://openalex.org/W2090017358', 'https://openalex.org/W2091634218', 'https://openalex.org/W2099149842', 'https://openalex.org/W2099994710', 'https://openalex.org/W2107764928', 'https://openalex.org/W2111574865', 'https://openalex.org/W2115734610', 'https://openalex.org/W2119315087', 'https://openalex.org/W2124100078', 'https://openalex.org/W2137293271', 'https://openalex.org/W2137325336', 'https://openalex.org/W2139414608', 'https://openalex.org/W2142143862', 'https://openalex.org/W2143829617', 'https://openalex.org/W2156027470', 'https://openalex.org/W2163191416', 'https://openalex.org/W2165646311', 'https://openalex.org/W2166406784', 'https://openalex.org/W2171280873', 'https://openalex.org/W2172228379', 'https://openalex.org/W2180588273', 'https://openalex.org/W2287820377', 'https://openalex.org/W2415342604', 'https://openalex.org/W2440669710', 'https://openalex.org/W2507431734', 'https://openalex.org/W2519967876', 'https://openalex.org/W2592597012', 'https://openalex.org/W2625319875', 'https://openalex.org/W2747026775', 'https://openalex.org/W2769788698', 'https://openalex.org/W2773380510', 'https://openalex.org/W2792353080', 'https://openalex.org/W2794580877', 'https://openalex.org/W2796406316', 'https://openalex.org/W2803309572', 'https://openalex.org/W2807249764', 'https://openalex.org/W2886850841', 'https://openalex.org/W4212982236'], 'related_works': ['https://openalex.org/W610932502', 'https://openalex.org/W3123442693', 'https://openalex.org/W3028073815', 'https://openalex.org/W2549283853', 'https://openalex.org/W2507434834', 'https://openalex.org/W2403366211', 'https://openalex.org/W2082055828', 'https://openalex.org/W2079755951', 'https://openalex.org/W2021444795', 'https://openalex.org/W1979707090'], 'abstract_inverted_index': {'Zymomonas': [0], 'mobilis': [1, 18, 74], 'is': [2, 66], 'a': [3, 23, 289], 'model': [4], 'bacterial': [5], 'ethanologen': [6], 'with': [7, 130, 205, 221, 256, 276], 'many': [8], 'systems': [9, 101, 120], 'biology': [10, 102, 121], 'studies': [11, 122], 'reported.': [12], 'Besides': [13], 'lignocellulosic': [14], 'ethanol': [15], 'production,': [16], 'Z.': [17, 73, 284, 350], 'has': [19], 'been': [20], 'developed': [21, 153, 337], 'as': [22, 52], 'platform': [24], 'for': [25, 68, 81, 135, 171, 181, 247, 279], 'biochemical': [26], 'production': [27], 'through': [28], 'metabolic': [29, 281], 'engineering.': [30], 'However,': [31], 'identification': [32], 'and': [33, 54, 83, 126, 144, 173, 244, 250, 262, 269, 273, 306, 320, 329], 'rigorous': [34], 'understanding': [35], 'of': [36, 40, 49, 72, 79, 97, 114, 201, 318, 349], 'the': [37, 69, 90, 95, 111, 161, 167, 190, 199, 210, 228, 239, 242, 248, 304, 316, 333], 'genetic': [38, 297, 323, 347], 'origins': [39], 'cellular': [41], 'function,': [42], 'especially': [43], 'those': [44], 'based': [45, 99, 109, 226, 325], 'in': [46, 61, 283, 309, 338], 'non-coding': [47], 'region': [48], 'DNA,': [50], 'such': [51], 'promoters': [53, 98, 129, 180, 204, 272, 305], 'ribosomal': [55], 'binding': [56], 'sites': [57], '(RBSs),': [58], 'are': [59, 160, 253], 'still': [60], 'its': [62], 'infancy.': [63], 'This': [64, 183, 312], 'knowledge': [65], 'crucial': [67], 'effective': [70], 'application': [71], 'to': [75, 92, 197, 216, 295, 303, 344, 357], 'new': [76], 'industrial': [77], 'applications': [78], 'biotechnology': [80], 'fuels': [82], 'chemicals': [84], 'production.In': [85], 'this': [86, 310, 339], 'study,': [87], 'we': [88], 'explored': [89], 'possibility': [91], 'systematically': [93], 'predict': [94], 'strength': [96, 106, 200, 252], 'on': [100, 110, 227, 326], 'datasets.': [103], 'The': [104], 'promoter': [105, 170, 249], 'was': [107, 152, 187, 195, 214], 'clustered': [108], 'expression': [112], 'values': [113, 258], 'downstream': [115], 'genes': [116], '(or': [117], 'proteins)': [118], 'from': [119, 230], 'including': [123], 'microarray,': [124], 'RNA-Seq': [125], 'proteomics.': [127], 'Candidate': [128], 'different': [131, 206, 222, 277], 'strengths': [132, 278], 'were': [133], 'selected': [134], 'further': [136], 'characterization,': [137], 'which': [138, 154, 194, 352], 'include': [139], '19': [140], 'strong,': [141], 'nine': [142], 'medium,': [143], 'ten': [145], 'weak': [146], 'ones.': [147], 'A': [148], 'dual': [149, 184, 211, 292, 334], 'reporter-gene': [150, 185, 212, 293, 335], 'system': [151, 186, 213, 294, 336], 'included': [155], 'appropriate': [156], 'reporter': [157, 163, 175], 'genes.': [158], 'These': [159], 'opmCherry': [162], 'gene': [164, 176], 'driven': [165, 177], 'by': [166, 178], 'constitutive': [168], 'PlacUV5': [169], 'calibration,': [172], 'EGFP': [174], 'candidate': [179, 322], 'quantification.': [182], 'confirmed': [188], 'using': [189], 'inducible': [191], 'promoter,': [192], 'Ptet,': [193], 'used': [196], 'determine': [198, 217], 'these': [202], 'predicted': [203], 'strengths.': [207], 'In': [208], 'addition,': [209], 'applied': [215, 356], 'four': [218, 274], 'synthetic': [219], 'RBSs': [220, 275, 307], 'translation': [223], 'initiation': [224], 'rates': [225], 'prediction': [229, 243], 'bioinformatics': [231, 330], 'server': [232], 'RBS': [233, 251], 'calculator.': [234], 'Our': [235], 'results': [236, 246], 'showed': [237], 'that': [238], 'correlations': [240], 'between': [241], 'experimental': [245], 'relatively': [254], 'high,': [255], 'R2': [257], 'more': [259], 'than': [260], '0.7': [261], '0.9,': [263], 'respectively.This': [264], 'study': [265, 313, 340], 'not': [266, 301], 'only': [267], 'identified': [268], 'characterized': [270], '38': [271], 'future': [280], 'engineering': [282], 'mobilis,': [285, 351], 'but': [286, 300], 'also': [287, 314, 354], 'established': [288], 'flow': [290], 'cytometry-based': [291], 'characterize': [296, 345], 'elements': [298, 324, 348], 'including,': [299], 'limited': [302], 'studied': [308], 'work.': [311], 'suggested': [315], 'feasibility': [317], 'predicting': [319], 'selecting': [321], 'omics': [327], 'datasets': [328], 'tools.': [331], 'Moreover,': [332], 'can': [341, 353], 'be': [342, 355], 'utilized': [343], 'other': [346, 358], 'microorganisms.': [359]}, 'cited_by_api_url': 'https://api.openalex.org/works?filter=cites:W2922357899', 'counts_by_year': [{'year': 2024, 'cited_by_count': 8}, {'year': 2023, 'cited_by_count': 6}, {'year': 2022, 'cited_by_count': 11}, {'year': 2021, 'cited_by_count': 27}, {'year': 2020, 'cited_by_count': 26}, {'year': 2019, 'cited_by_count': 6}], 'updated_date': '2024-12-26T13:23:54.134472', 'created_date': '2019-03-22'}