Get quick answers to your questions about the article from our AI researcher chatbot
{'id': 'https://openalex.org/W2496112388', 'doi': 'https://doi.org/10.1007/s11538-016-0199-4', 'title': 'Do Branch Lengths Help to Locate a Tree in a Phylogenetic Network?', 'display_name': 'Do Branch Lengths Help to Locate a Tree in a Phylogenetic Network?', 'publication_year': 2016, 'publication_date': '2016-09-01', 'ids': {'openalex': 'https://openalex.org/W2496112388', 'doi': 'https://doi.org/10.1007/s11538-016-0199-4', 'mag': '2496112388', 'pmid': 'https://pubmed.ncbi.nlm.nih.gov/27659024'}, 'language': 'en', 'primary_location': {'is_oa': False, 'landing_page_url': 'https://doi.org/10.1007/s11538-016-0199-4', 'pdf_url': None, 'source': {'id': 'https://openalex.org/S118940690', 'display_name': 'Bulletin of Mathematical Biology', 'issn_l': '0092-8240', 'issn': ['0092-8240', '1522-9602'], 'is_oa': False, 'is_in_doaj': False, 'is_core': True, 'host_organization': 'https://openalex.org/P4310319900', 'host_organization_name': 'Springer Science+Business Media', 'host_organization_lineage': ['https://openalex.org/P4310319965', 'https://openalex.org/P4310319900'], 'host_organization_lineage_names': ['Springer Nature', 'Springer Science+Business Media'], 'type': 'journal'}, 'license': None, 'license_id': None, 'version': None, 'is_accepted': False, 'is_published': False}, 'type': 'article', 'type_crossref': 'journal-article', 'indexed_in': ['arxiv', 'crossref', 'datacite', 'pubmed'], 'open_access': {'is_oa': True, 'oa_status': 'green', 'oa_url': 'https://hal.science/hal-01372824/document', 'any_repository_has_fulltext': True}, 'authorships': [{'author_position': 'first', 'author': {'id': 'https://openalex.org/A5091393268', 'display_name': 'Philippe Gambette', 'orcid': 'https://orcid.org/0000-0001-7062-0262'}, 'institutions': [{'id': 'https://openalex.org/I4210152518', 'display_name': "Laboratoire d'Informatique Gaspard-Monge", 'ror': 'https://ror.org/04t50yk91', 'country_code': 'FR', 'type': 'facility', 'lineage': ['https://openalex.org/I1294671590', 'https://openalex.org/I142631665', 'https://openalex.org/I190752583', 'https://openalex.org/I4210152518', 'https://openalex.org/I4210154111', 'https://openalex.org/I4210159245']}], 'countries': ['FR'], 'is_corresponding': False, 'raw_author_name': 'Philippe Gambette', 'raw_affiliation_strings': ["Laboratoire d'Informatique Gaspard-Monge"], 'affiliations': [{'raw_affiliation_string': "Laboratoire d'Informatique Gaspard-Monge", 'institution_ids': ['https://openalex.org/I4210152518']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5069094985', 'display_name': 'Leo van Iersel', 'orcid': 'https://orcid.org/0000-0001-7142-4706'}, 'institutions': [{'id': 'https://openalex.org/I4210093841', 'display_name': 'Institute of Applied Mathematics', 'ror': 'https://ror.org/00h9jx107', 'country_code': 'RU', 'type': 'facility', 'lineage': ['https://openalex.org/I1313323035', 'https://openalex.org/I4210093841', 'https://openalex.org/I4210124601', 'https://openalex.org/I4210148470']}], 'countries': ['RU'], 'is_corresponding': False, 'raw_author_name': 'Leo van Iersel', 'raw_affiliation_strings': ['Delft Institute of Applied Mathematics'], 'affiliations': [{'raw_affiliation_string': 'Delft Institute of Applied Mathematics', 'institution_ids': ['https://openalex.org/I4210093841']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5026795741', 'display_name': 'Steven Kelk', 'orcid': 'https://orcid.org/0000-0002-9518-4724'}, 'institutions': [{'id': 'https://openalex.org/I34352273', 'display_name': 'Maastricht University', 'ror': 'https://ror.org/02jz4aj89', 'country_code': 'NL', 'type': 'education', 'lineage': ['https://openalex.org/I34352273']}], 'countries': ['NL'], 'is_corresponding': False, 'raw_author_name': 'Steven Kelk', 'raw_affiliation_strings': ['Maastricht University [Maastricht]'], 'affiliations': [{'raw_affiliation_string': 'Maastricht University [Maastricht]', 'institution_ids': ['https://openalex.org/I34352273']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5071954558', 'display_name': 'Fabio Pardi', 'orcid': 'https://orcid.org/0000-0001-8084-1464'}, 'institutions': [{'id': 'https://openalex.org/I4210113863', 'display_name': 'Génomique Bioinformatique et Applications', 'ror': 'https://ror.org/0264vhs54', 'country_code': 'FR', 'type': 'facility', 'lineage': ['https://openalex.org/I124158823', 'https://openalex.org/I4210113863', 'https://openalex.org/I4210134562']}], 'countries': ['FR'], 'is_corresponding': False, 'raw_author_name': 'Fabio Pardi', 'raw_affiliation_strings': ['Institut de Biologie Computationnelle', 'Méthodes et Algorithmes pour la Bioinformatique'], 'affiliations': [{'raw_affiliation_string': 'Institut de Biologie Computationnelle', 'institution_ids': []}, {'raw_affiliation_string': 'Méthodes et Algorithmes pour la Bioinformatique', 'institution_ids': ['https://openalex.org/I4210113863']}]}, {'author_position': 'last', 'author': {'id': 'https://openalex.org/A5057284934', 'display_name': 'Céline Scornavacca', 'orcid': 'https://orcid.org/0009-0004-0179-9771'}, 'institutions': [{'id': 'https://openalex.org/I4210105943', 'display_name': "Institut des Sciences de l'Evolution de Montpellier", 'ror': 'https://ror.org/01cah1n37', 'country_code': 'FR', 'type': 'facility', 'lineage': ['https://openalex.org/I1294671590', 'https://openalex.org/I131077856', 'https://openalex.org/I159885104', 'https://openalex.org/I19894307', 'https://openalex.org/I2802818602', 'https://openalex.org/I4210090127', 'https://openalex.org/I4210105943', 'https://openalex.org/I4210107625', 'https://openalex.org/I4210131494', 'https://openalex.org/I4210166444']}], 'countries': ['FR'], 'is_corresponding': False, 'raw_author_name': 'Celine Scornavacca', 'raw_affiliation_strings': ["Institut des Sciences de l'Evolution de Montpellier"], 'affiliations': [{'raw_affiliation_string': "Institut des Sciences de l'Evolution de Montpellier", 'institution_ids': ['https://openalex.org/I4210105943']}]}], 'countries_distinct_count': 3, 'institutions_distinct_count': 5, 'corresponding_author_ids': [], 'corresponding_institution_ids': [], 'apc_list': {'value': 2390, 'currency': 'EUR', 'value_usd': 2990, 'provenance': 'doaj'}, 'apc_paid': None, 'fwci': 0.498, 'has_fulltext': True, 'fulltext_origin': 'pdf', 'cited_by_count': 6, 'citation_normalized_percentile': {'value': 0.625938, 'is_in_top_1_percent': False, 'is_in_top_10_percent': False}, 'cited_by_percentile_year': {'min': 83, 'max': 84}, 'biblio': {'volume': '78', 'issue': '9', 'first_page': '1773', 'last_page': '1795'}, 'is_retracted': False, 'is_paratext': False, 'primary_topic': {'id': 'https://openalex.org/T10015', 'display_name': 'RNA Sequencing Data Analysis', 'score': 0.9986, 'subfield': {'id': 'https://openalex.org/subfields/1312', 'display_name': 'Molecular Biology'}, 'field': {'id': 'https://openalex.org/fields/13', 'display_name': 'Biochemistry, Genetics and Molecular Biology'}, 'domain': {'id': 'https://openalex.org/domains/1', 'display_name': 'Life Sciences'}}, 'topics': [{'id': 'https://openalex.org/T10015', 'display_name': 'RNA Sequencing Data Analysis', 'score': 0.9986, 'subfield': {'id': 'https://openalex.org/subfields/1312', 'display_name': 'Molecular Biology'}, 'field': {'id': 'https://openalex.org/fields/13', 'display_name': 'Biochemistry, Genetics and Molecular Biology'}, 'domain': {'id': 'https://openalex.org/domains/1', 'display_name': 'Life Sciences'}}, {'id': 'https://openalex.org/T11354', 'display_name': 'Evolutionary Dynamics of Mammals and Their Ancestors', 'score': 0.9984, 'subfield': {'id': 'https://openalex.org/subfields/1911', 'display_name': 'Paleontology'}, 'field': {'id': 'https://openalex.org/fields/19', 'display_name': 'Earth and Planetary Sciences'}, 'domain': {'id': 'https://openalex.org/domains/3', 'display_name': 'Physical Sciences'}}, {'id': 'https://openalex.org/T10012', 'display_name': 'Population Genetic Structure and Dynamics', 'score': 0.9919, 'subfield': {'id': 'https://openalex.org/subfields/1311', 'display_name': 'Genetics'}, 'field': {'id': 'https://openalex.org/fields/13', 'display_name': 'Biochemistry, Genetics and Molecular Biology'}, 'domain': {'id': 'https://openalex.org/domains/1', 'display_name': 'Life Sciences'}}], 'keywords': [{'id': 'https://openalex.org/keywords/tree', 'display_name': 'Tree (set theory)', 'score': 0.70464563}, {'id': 'https://openalex.org/keywords/phylogenetic-tree', 'display_name': 'phylogenetic tree', 'score': 0.638022}, {'id': 'https://openalex.org/keywords/phylogenetic-analysis', 'display_name': 'Phylogenetic Analysis', 'score': 0.589484}, {'id': 'https://openalex.org/keywords/reticulate-evolution', 'display_name': 'Reticulate evolution', 'score': 0.5810438}, {'id': 'https://openalex.org/keywords/tree-rearrangement', 'display_name': 'Tree rearrangement', 'score': 0.5399392}, {'id': 'https://openalex.org/keywords/genetic-structure', 'display_name': 'Genetic Structure', 'score': 0.530242}, {'id': 'https://openalex.org/keywords/phylogenetic-comparative-analysis', 'display_name': 'Phylogenetic Comparative Analysis', 'score': 0.517523}, {'id': 'https://openalex.org/keywords/computational-phylogenetics', 'display_name': 'Computational phylogenetics', 'score': 0.46655104}, {'id': 'https://openalex.org/keywords/horizontal-gene-transfer', 'display_name': 'Horizontal gene transfer', 'score': 0.4308427}, {'id': 'https://openalex.org/keywords/relevance', 'display_name': 'Relevance (law)', 'score': 0.42892238}], 'concepts': [{'id': 'https://openalex.org/C193252679', 'wikidata': 'https://www.wikidata.org/wiki/Q242125', 'display_name': 'Phylogenetic tree', 'level': 3, 'score': 0.8611696}, {'id': 'https://openalex.org/C26619641', 'wikidata': 'https://www.wikidata.org/wiki/Q3142246', 'display_name': 'Phylogenetic network', 'level': 4, 'score': 0.7738781}, {'id': 'https://openalex.org/C113174947', 'wikidata': 'https://www.wikidata.org/wiki/Q2859736', 'display_name': 'Tree (set theory)', 'level': 2, 'score': 0.70464563}, {'id': 'https://openalex.org/C2778727739', 'wikidata': 'https://www.wikidata.org/wiki/Q18434417', 'display_name': 'Reticulate evolution', 'level': 4, 'score': 0.5810438}, {'id': 'https://openalex.org/C2779343474', 'wikidata': 'https://www.wikidata.org/wiki/Q3109175', 'display_name': 'Context (archaeology)', 'level': 2, 'score': 0.5417003}, {'id': 'https://openalex.org/C53208351', 'wikidata': 'https://www.wikidata.org/wiki/Q7837630', 'display_name': 'Tree rearrangement', 'level': 4, 'score': 0.5399392}, {'id': 'https://openalex.org/C90132467', 'wikidata': 'https://www.wikidata.org/wiki/Q171184', 'display_name': 'Phylogenetics', 'level': 3, 'score': 0.47876325}, {'id': 'https://openalex.org/C41168302', 'wikidata': 'https://www.wikidata.org/wiki/Q3772859', 'display_name': 'Computational phylogenetics', 'level': 5, 'score': 0.46655104}, {'id': 'https://openalex.org/C92938381', 'wikidata': 'https://www.wikidata.org/wiki/Q83185', 'display_name': 'Horizontal gene transfer', 'level': 4, 'score': 0.4308427}, {'id': 'https://openalex.org/C158154518', 'wikidata': 'https://www.wikidata.org/wiki/Q7310970', 'display_name': 'Relevance (law)', 'level': 2, 'score': 0.42892238}, {'id': 'https://openalex.org/C33923547', 'wikidata': 'https://www.wikidata.org/wiki/Q395', 'display_name': 'Mathematics', 'level': 0, 'score': 0.38108888}, {'id': 'https://openalex.org/C86803240', 'wikidata': 'https://www.wikidata.org/wiki/Q420', 'display_name': 'Biology', 'level': 0, 'score': 0.37047938}, {'id': 'https://openalex.org/C41008148', 'wikidata': 'https://www.wikidata.org/wiki/Q21198', 'display_name': 'Computer science', 'level': 0, 'score': 0.3657708}, {'id': 'https://openalex.org/C78458016', 'wikidata': 'https://www.wikidata.org/wiki/Q840400', 'display_name': 'Evolutionary biology', 'level': 1, 'score': 0.33401346}, {'id': 'https://openalex.org/C114614502', 'wikidata': 'https://www.wikidata.org/wiki/Q76592', 'display_name': 'Combinatorics', 'level': 1, 'score': 0.2742703}, {'id': 'https://openalex.org/C104317684', 'wikidata': 'https://www.wikidata.org/wiki/Q7187', 'display_name': 'Gene', 'level': 2, 'score': 0.15106902}, {'id': 'https://openalex.org/C54355233', 'wikidata': 'https://www.wikidata.org/wiki/Q7162', 'display_name': 'Genetics', 'level': 1, 'score': 0.1253474}, {'id': 'https://openalex.org/C151730666', 'wikidata': 'https://www.wikidata.org/wiki/Q7205', 'display_name': 'Paleontology', 'level': 1, 'score': 0.099015385}, {'id': 'https://openalex.org/C17744445', 'wikidata': 'https://www.wikidata.org/wiki/Q36442', 'display_name': 'Political science', 'level': 0, 'score': 0.0}, {'id': 'https://openalex.org/C199539241', 'wikidata': 'https://www.wikidata.org/wiki/Q7748', 'display_name': 'Law', 'level': 1, 'score': 0.0}], 'mesh': [{'descriptor_ui': 'D008957', 'descriptor_name': 'Models, Genetic', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': True}, {'descriptor_ui': 'D010802', 'descriptor_name': 'Phylogeny', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': True}, {'descriptor_ui': 'D000465', 'descriptor_name': 'Algorithms', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D019143', 'descriptor_name': 'Evolution, Molecular', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D055641', 'descriptor_name': 'Mathematical Concepts', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}], 'locations_count': 9, 'locations': [{'is_oa': False, 'landing_page_url': 'https://doi.org/10.1007/s11538-016-0199-4', 'pdf_url': None, 'source': {'id': 'https://openalex.org/S118940690', 'display_name': 'Bulletin of Mathematical Biology', 'issn_l': '0092-8240', 'issn': ['0092-8240', '1522-9602'], 'is_oa': False, 'is_in_doaj': False, 'is_core': True, 'host_organization': 'https://openalex.org/P4310319900', 'host_organization_name': 'Springer Science+Business Media', 'host_organization_lineage': ['https://openalex.org/P4310319965', 'https://openalex.org/P4310319900'], 'host_organization_lineage_names': ['Springer Nature', 'Springer Science+Business Media'], 'type': 'journal'}, 'license': None, 'license_id': None, 'version': None, 'is_accepted': False, 'is_published': False}, {'is_oa': True, 'landing_page_url': 'https://hal-upec-upem.archives-ouvertes.fr/hal-01372824', 'pdf_url': 'https://hal.science/hal-01372824/document', 'source': {'id': 'https://openalex.org/S4306402512', 'display_name': 'HAL (Le Centre pour la Communication Scientifique Directe)', 'issn_l': None, 'issn': None, 'is_oa': True, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I1294671590', 'host_organization_name': 'Centre National de la Recherche Scientifique', 'host_organization_lineage': ['https://openalex.org/I1294671590'], 'host_organization_lineage_names': ['Centre National de la Recherche Scientifique'], 'type': 'repository'}, 'license': None, 'license_id': None, 'version': 'submittedVersion', 'is_accepted': False, 'is_published': False}, {'is_oa': True, 'landing_page_url': 'https://arxiv.org/abs/1607.06285', 'pdf_url': 'https://arxiv.org/pdf/1607.06285', 'source': {'id': 'https://openalex.org/S4306400194', 'display_name': 'arXiv (Cornell University)', 'issn_l': None, 'issn': None, 'is_oa': True, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I205783295', 'host_organization_name': 'Cornell University', 'host_organization_lineage': ['https://openalex.org/I205783295'], 'host_organization_lineage_names': ['Cornell University'], 'type': 'repository'}, 'license': None, 'license_id': None, 'version': 'submittedVersion', 'is_accepted': False, 'is_published': False}, {'is_oa': False, 'landing_page_url': 'https://hal.science/hal-01372824', 'pdf_url': None, 'source': None, 'license': None, 'license_id': None, 'version': None, 'is_accepted': False, 'is_published': False}, {'is_oa': True, 'landing_page_url': 'https://hal-upec-upem.archives-ouvertes.fr/hal-01372824/document', 'pdf_url': 'https://hal-upec-upem.archives-ouvertes.fr/hal-01372824/document', 'source': {'id': 'https://openalex.org/S4306402512', 'display_name': 'HAL (Le Centre pour la Communication Scientifique Directe)', 'issn_l': None, 'issn': None, 'is_oa': True, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I1294671590', 'host_organization_name': 'Centre National de la Recherche Scientifique', 'host_organization_lineage': ['https://openalex.org/I1294671590'], 'host_organization_lineage_names': ['Centre National de la Recherche Scientifique'], 'type': 'repository'}, 'license': None, 'license_id': None, 'version': 'submittedVersion', 'is_accepted': False, 'is_published': False}, {'is_oa': True, 'landing_page_url': 'https://hal.science/hal-01372824/file/2016GambetteIerselKelkPardiScornavacca.pdf', 'pdf_url': 'https://hal.science/hal-01372824/file/2016GambetteIerselKelkPardiScornavacca.pdf', 'source': {'id': 'https://openalex.org/S4306402512', 'display_name': 'HAL (Le Centre pour la Communication Scientifique Directe)', 'issn_l': None, 'issn': None, 'is_oa': True, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I1294671590', 'host_organization_name': 'Centre National de la Recherche Scientifique', 'host_organization_lineage': ['https://openalex.org/I1294671590'], 'host_organization_lineage_names': ['Centre National de la Recherche Scientifique'], 'type': 'repository'}, 'license': None, 'license_id': None, 'version': 'submittedVersion', 'is_accepted': False, 'is_published': False}, {'is_oa': True, 'landing_page_url': 'https://hal-upec-upem.archives-ouvertes.fr/hal-01372824/file/2016GambetteIerselKelkPardiScornavacca.pdf', 'pdf_url': 'https://hal-upec-upem.archives-ouvertes.fr/hal-01372824/file/2016GambetteIerselKelkPardiScornavacca.pdf', 'source': {'id': 'https://openalex.org/S4306402512', 'display_name': 'HAL (Le Centre pour la Communication Scientifique Directe)', 'issn_l': None, 'issn': None, 'is_oa': True, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I1294671590', 'host_organization_name': 'Centre National de la Recherche Scientifique', 'host_organization_lineage': ['https://openalex.org/I1294671590'], 'host_organization_lineage_names': ['Centre National de la Recherche Scientifique'], 'type': 'repository'}, 'license': None, 'license_id': None, 'version': 'submittedVersion', 'is_accepted': False, 'is_published': False}, {'is_oa': False, 'landing_page_url': 'https://pubmed.ncbi.nlm.nih.gov/27659024', 'pdf_url': None, 'source': {'id': 'https://openalex.org/S4306525036', 'display_name': 'PubMed', 'issn_l': None, 'issn': None, 'is_oa': False, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I1299303238', 'host_organization_name': 'National Institutes of Health', 'host_organization_lineage': ['https://openalex.org/I1299303238'], 'host_organization_lineage_names': ['National Institutes of Health'], 'type': 'repository'}, 'license': None, 'license_id': None, 'version': None, 'is_accepted': False, 'is_published': False}, {'is_oa': False, 'landing_page_url': 'https://api.datacite.org/dois/10.48550/arxiv.1607.06285', 'pdf_url': None, 'source': {'id': 'https://openalex.org/S4393179698', 'display_name': 'DataCite API', 'issn_l': None, 'issn': None, 'is_oa': True, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I4210145204', 'host_organization_name': 'DataCite', 'host_organization_lineage': ['https://openalex.org/I4210145204'], 'host_organization_lineage_names': ['DataCite'], 'type': 'metadata'}, 'license': None, 'license_id': None, 'version': None}], 'best_oa_location': {'is_oa': True, 'landing_page_url': 'https://hal-upec-upem.archives-ouvertes.fr/hal-01372824', 'pdf_url': 'https://hal.science/hal-01372824/document', 'source': {'id': 'https://openalex.org/S4306402512', 'display_name': 'HAL (Le Centre pour la Communication Scientifique Directe)', 'issn_l': None, 'issn': None, 'is_oa': True, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I1294671590', 'host_organization_name': 'Centre National de la Recherche Scientifique', 'host_organization_lineage': ['https://openalex.org/I1294671590'], 'host_organization_lineage_names': ['Centre National de la Recherche Scientifique'], 'type': 'repository'}, 'license': None, 'license_id': None, 'version': 'submittedVersion', 'is_accepted': False, 'is_published': False}, 'sustainable_development_goals': [{'id': 'https://metadata.un.org/sdg/15', 'score': 0.58, 'display_name': 'Life on land'}], 'grants': [], 'datasets': [], 'versions': ['https://openalex.org/W2496112388', 'https://openalex.org/W3098329170'], 'referenced_works_count': 44, 'referenced_works': ['https://openalex.org/W1527128109', 'https://openalex.org/W1600112846', 'https://openalex.org/W1972621850', 'https://openalex.org/W1979100126', 'https://openalex.org/W1980190786', 'https://openalex.org/W1986115705', 'https://openalex.org/W1986316739', 'https://openalex.org/W1987784886', 'https://openalex.org/W1990395957', 'https://openalex.org/W1997260806', 'https://openalex.org/W2005892692', 'https://openalex.org/W2019622749', 'https://openalex.org/W2066429145', 'https://openalex.org/W2067121015', 'https://openalex.org/W2071412858', 'https://openalex.org/W2071794013', 'https://openalex.org/W2082397064', 'https://openalex.org/W2095381673', 'https://openalex.org/W2098558111', 'https://openalex.org/W2106549255', 'https://openalex.org/W2107508473', 'https://openalex.org/W2108923274', 'https://openalex.org/W2112400707', 'https://openalex.org/W2112755610', 'https://openalex.org/W2116087731', 'https://openalex.org/W2117665706', 'https://openalex.org/W2125813654', 'https://openalex.org/W2127498940', 'https://openalex.org/W2128431749', 'https://openalex.org/W2129250527', 'https://openalex.org/W2135713257', 'https://openalex.org/W2144413761', 'https://openalex.org/W2152997891', 'https://openalex.org/W2167586272', 'https://openalex.org/W2168907268', 'https://openalex.org/W2409011140', 'https://openalex.org/W2484986946', 'https://openalex.org/W3145128584', 'https://openalex.org/W4239365612', 'https://openalex.org/W4241651029', 'https://openalex.org/W4243187486', 'https://openalex.org/W4246219036', 'https://openalex.org/W4254268221', 'https://openalex.org/W4285719527'], 'related_works': ['https://openalex.org/W85430217', 'https://openalex.org/W4389053046', 'https://openalex.org/W4295900963', 'https://openalex.org/W4290377314', 'https://openalex.org/W4288093106', 'https://openalex.org/W4232215631', 'https://openalex.org/W4225979284', 'https://openalex.org/W2980045187', 'https://openalex.org/W2365588293', 'https://openalex.org/W229812359'], 'abstract_inverted_index': {'Phylogenetic': [0], 'networks': [1, 217], 'are': [2], 'increasingly': [3], 'used': [4], 'in': [5, 36, 49, 66, 76, 113, 186, 246], 'evolutionary': [6, 123], 'biology': [7], 'to': [8, 172, 226], 'represent': [9], 'the': [10, 30, 41, 67, 101, 104, 114, 129, 143, 153, 170, 181, 214, 229, 233, 236, 240, 243], 'history': [11], 'of': [12, 29, 43, 103, 110, 116, 131, 142, 150, 152, 198, 201, 216, 218, 248], 'species': [13, 51], 'that': [14, 34, 136, 157, 207], 'have': [15, 97], 'undergone': [16], 'reticulate': [17], 'events': [18], 'such': [19], 'as': [20, 239], 'horizontal': [21], 'gene': [22, 45], 'transfer,': [23], 'hybrid': [24], 'speciation': [25], 'and': [26], 'recombination.': [27], 'One': [28], 'most': [31, 95, 188], 'fundamental': [32], 'questions': [33], 'arise': [35], 'this': [37, 62, 82, 209], 'context': [38], 'is': [39, 63, 70, 119, 183, 224], 'whether': [40], 'evolution': [42], 'a': [44, 56, 71, 77, 91, 108, 148, 176, 179, 192, 196], 'with': [46, 235], 'one': [47, 245], 'copy': [48], 'all': [50], 'can': [52], 'be': [53], 'explained': [54], 'by': [55, 122, 232], 'given': [57, 72, 78], 'network.': [58], 'In': [59], 'mathematical': [60], 'terms,': [61], 'often': [64], 'translated': [65], 'following': [68], 'way:': [69], 'phylogenetic': [73, 79, 117], 'tree': [74, 83, 154, 177], 'contained': [75, 231], 'network?': [80], 'Recently': [81], 'containment': [84, 155], 'problem': [85, 156, 182, 210], 'has': [86, 137, 169], 'been': [87], 'widely': [88], 'investigated': [89], 'from': [90], 'computational': [92], 'perspective,': [93], 'but': [94], 'studies': [96], 'only': [98], 'focused': [99], 'on': [100], 'topology': [102, 238], 'phylo-': [105], 'genies,': [106], 'ignoring': [107], 'piece': [109], 'information': [111, 168], 'that,': [112, 165], 'case': [115, 215], 'trees,': [118], 'routinely': [120], 'inferred': [121], 'analyses:': [124], 'branch': [125, 141, 161, 249], 'lengths.': [126, 162, 250], 'These': [127], 'measure': [128], 'amount': [130], 'change': [132], '(e.g.,': [133], 'nucleotide': [134], 'substitutions)': [135], 'occurred': [138], 'along': [139], 'each': [140], 'phylogeny.': [144], 'Here,': [145], 'we': [146, 204], 'study': [147], 'number': [149, 197], 'versions': [151], 'explicitly': [158], 'account': [159], 'for': [160, 195, 221], 'We': [163], 'show': [164], 'although': [166], 'length': [167], 'potential': [171], 'locate': [173], 'more': [174], 'precisely': [175], 'within': [178], 'network,': [180], 'computationally': [184], 'hard': [185], 'its': [187], 'general': [189], 'form.': [190], 'On': [191], 'positive': [193], 'note,': [194], 'special': [199], 'cases': [200], 'biological': [202], 'relevance,': [203], 'provide': [205], 'algorithms': [206], 'solve': [208], 'efficiently.': [211], 'This': [212], 'includes': [213], 'limited': [219], 'complexity,': [220], 'which': [222], 'it': [223], 'possible': [225], 'recover,': [227], 'among': [228], 'trees': [230], 'network': [234], 'same': [237], 'input': [241], 'tree,': [242], 'closest': [244], 'terms': [247]}, 'cited_by_api_url': 'https://api.openalex.org/works?filter=cites:W2496112388', 'counts_by_year': [{'year': 2022, 'cited_by_count': 1}, {'year': 2019, 'cited_by_count': 2}, {'year': 2018, 'cited_by_count': 3}], 'updated_date': '2024-09-01T08:09:40.470043', 'created_date': '2016-08-23'}