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2675, 2730, 2750, 2766, 2780, 2794, 2840, 2854, 2870, 2894, 2902, 2955, 2977, 3067, 3146, 3149, 3164, 3188, 3228, 3519, 3910, 4087, 4111], 'profiling,': [43, 156], 'ii)': [44, 157, 583, 1677], 'specific': [45, 61, 158, 174, 367, 413, 1864, 2164, 2305, 3413, 3649], 'affinity': [46, 159, 356, 1050, 1078, 1185, 1211, 1615, 2170, 2309], 'reagents': [47, 57, 160, 170, 291, 357, 1904, 1955, 1977, 2171], 'various': [49, 162, 604, 3047], 'functional': [50, 163, 785, 1982, 2327], 'protein': [51, 96, 164, 209, 307, 530, 554, 568, 589, 593, 602, 617, 652, 674, 685, 776, 908, 970, 1009, 1028, 1111, 1149, 1191, 1253, 1276, 1297, 1317, 1369, 1418, 1444, 1456, 1489, 1769, 1945, 2055, 2112, 2314, 2472, 2505, 3030, 3181, 3206, 3279, 3331, 3362, 3463, 3490, 3542, 3645, 3686, 3836, 3882, 4197], 'assays,': [52, 165, 1985], 'and': [53, 63, 69, 94, 101, 110, 166, 176, 182, 207, 214, 223, 280, 304, 309, 434, 487, 499, 501, 534, 577, 611, 637, 749, 831, 854, 909, 933, 1066, 1126, 1140, 1153, 1247, 1315, 1363, 1486, 1550, 1559, 1639, 1646, 1684, 1774, 1798, 1859, 1891, 1924, 1975, 1983, 2060, 2084, 2150, 2180, 2304, 2340, 2365, 2386, 2396, 2406, 2433, 2448, 2510, 2548, 2555, 2566, 2607, 2637, 2673, 2747, 2799, 2849, 2862, 2899, 2918, 2926, 2966, 3046, 3062, 3112, 3116, 3176, 3223, 3256, 3278, 3387, 3390, 3400, 3460, 3470, 3498, 3521, 3592, 3618, 3636, 3665, 3698, 3720, 3724, 3793, 3835, 3844, 3884, 3892, 3901, 3928, 3947, 3988, 4049, 4104, 4131, 4137, 4166, 4185, 4201, 4212], 'iii)': [54, 167, 587, 1754], 'capture': [55, 168], '("pull-down")': [56, 169], 'purification': [59, 172, 1061, 1081, 1143, 1171, 1212, 1249, 1551, 1616, 1808, 2263, 2310], 'their': [64, 177], 'associated': [65, 178], 'complexes': [66, 179], 'structural': [68, 181, 403, 1300], 'biochemical': [70, 183, 410, 663, 1154], 'analyses.': [71, 184], 'In': [72, 185, 354, 479, 666, 889, 1048, 1508, 2001, 2356, 3019, 3178, 3601, 4003], 'this': [73, 186, 480, 1536, 3179, 3547, 3563, 3578, 3607], 'review,': [74, 187, 481], 'such': [80, 193, 1134, 1197, 1221, 1439, 1670, 1995, 2046, 2136, 2375, 3701], 'will': [82, 195, 483, 518], 'discussed': [84, 197], 'with': [85, 198, 503, 675, 691, 735, 1172, 1327, 1352, 1541, 1573, 1580, 1897, 1997, 2271, 2316, 2338, 2427, 2896, 3381, 3528, 3558, 3841, 4058], 'focus': [86, 199], 'on': [87, 200, 346, 390, 884, 895, 902, 1106, 1132, 2079, 2103, 2313, 2373, 2430, 2826, 2916, 3125, 3251, 3275, 3532, 4113], 'possibility': [89, 202, 2398, 2545, 3798], 'create': [91, 204, 1584], 'descriptive': [93, 206], 'comprehensive': [95, 208, 529, 4121], 'atlas': [97, 210, 531, 4198], 'distribution': [100, 213, 4158], 'subcellular': [102, 215, 2556, 3945], 'localization': [103, 216, 3252, 4009, 4202], 'both': [108, 221, 930, 1855, 3042, 4183], 'normal': [109, 222, 2563, 3043, 3083, 3163, 3496, 3605, 3635], 'disease': [111, 224, 3637, 3656], 'tissues.': [112, 225, 2864], 'A': [226, 960, 2258, 2410, 2532, 2635, 2949, 3198, 3340, 3873, 4025], 'great': [227], 'need': [228, 1137, 2378, 2389], 'exists': [229], 'proteome': [240], '(1.Agaton': [241], 'C.': [242, 772, 973, 996, 1382, 1405, 1695, 1711, 1810, 2230, 3713, 3744], 'Uhlen': [243, 769, 1003, 1412, 1818, 2238], 'M.': [244, 323, 325, 341, 447, 762, 770, 982, 1004, 1091, 1097, 1391, 1413, 1819, 2239, 2687, 2946], 'Hober': [245, 1820, 2240], 'S.': [246, 254, 343, 453, 764, 774, 988, 1000, 1099, 1263, 1397, 1409, 1747, 1821, 2241, 2691], 'Genome-based': [247], 'proteomics.Electrophoresis.': [248], '2004;': [249, 263, 396, 1779, 1794, 1834, 2038, 2065, 2129, 2254, 2754, 2772, 3015, 4227], '25:': [250, 2525], '1280-1288Google': [251], 'Scholar,': [252, 333, 445, 760, 1709, 1782, 2527, 2628, 2757, 3001, 3732, 4230], '2.Hanash': [253], 'HUPO': [255], 'initiatives': [256], 'relevant': [257, 3674], 'clinical': [259, 533, 3073, 3234, 4191], 'proteomics.Mol.': [260], 'Cell.': [261, 1019, 1428, 3972], 'Proteomics.': [262, 1020, 1429], '3:': [264], '298-301Google': [265], 'Scholar).': [266, 353, 478, 648, 791, 959, 1024, 1164, 1268, 1377, 1837, 1951, 2068, 2132, 2216, 2257, 2543, 2713, 2775, 2961, 3018, 3079, 3240, 3506, 3773, 3976, 4100], 'These': [267, 2169], 'efforts,': [268, 3406], 'usually': [269, 595, 687, 848, 1871, 2020], 'denoted': [270], 'antibody': [271, 544, 1372, 1493, 1702, 1790, 2034, 2207, 2306, 2361, 2370, 2402, 2420, 2622, 3353, 3432, 3560, 3579, 3608, 3650], 'proteomics,': [272], 'is': [273, 546, 653, 686, 698, 711, 717, 801, 828, 856, 966, 1202, 1277, 1538, 1557, 1562, 1964, 2005, 2260, 2265, 2342, 2346, 2422, 2783, 2841, 2856, 2871, 2878, 3295, 3354, 3396, 3445, 3492, 3525, 3651, 3678, 3912, 3923, 3978, 4037, 4051, 4128, 4142, 4193], 'here': [274], 'defined': [275, 1914, 1976, 2550], 'as': [276, 468, 522, 524, 689, 781, 818, 1135, 1198, 1222, 1495, 1622, 1671, 1907, 1973, 1996, 2047, 2137, 2148, 2227, 2269, 2336, 2376, 2466, 2486, 2928, 3069, 3230, 3372, 3374, 3751, 3817, 3819, 3864, 3866], 'systematic': [278, 1008, 1417, 3663], 'Affinity': [290, 1005, 1414], 'utilized': [294, 2162, 2589], 'numerous': [296, 3301], 'platforms': [298, 1980], '(Fig.': [299, 2810, 3166, 3575], '1),': [300], 'vivo': [303], 'vitro': [306, 1761, 2073, 2140, 3690], 'profiling': [308, 517, 1010, 1419, 2705, 2993, 3009, 3068, 3229, 3716, 4034, 4221], 'pull-out': [311], 'experiments': [312], 'enable': [314, 4015], 'identification': [315], 'interaction': [317], 'partners': [318], 'or': [319, 400, 406, 586, 1200, 1325, 1675, 1722, 1999, 2042, 2580, 3693, 3917, 4208], 'posttranslational': [320, 1479], 'modifications': [321], '(3.Tyers': [322], 'Mann': [324], 'From': [326, 1151, 2789], 'genomics': [327, 404], 'proteomics.Nature.': [329], '2003;': [330, 350, 956, 1021, 1161, 1430, 3973, 4097], '422:': [331, 351], '193-197Google': [332], '4.Phizicky': [334], 'E.': [335, 768, 986, 1395, 3740, 4232], 'Bastiaens': [336], 'P.I.': [337], 'Zhu': [338], 'H.': [339, 455, 1725, 2612, 3483, 4070, 4080, 4082], 'Snyder': [340], 'Fields': [342], 'Protein': [344, 385, 953, 1446], 'proteomic': [348], 'scale.Nature.': [349], '208-215Google': [352], 'addition,': [355, 890, 1049, 2002, 4004], 'spotted': [360], 'onto': [361, 2801], 'microarrays': [362, 512, 2701, 4088], 'detection': [365, 387, 392, 1984], 'biomolecules': [368], 'complex': [370], 'biosamples': [371], '(5.Espina': [372], 'V.': [373], 'Woodhouse': [374], 'E.C.': [375], 'Wulfkuhle': [376], 'J.': [377, 975, 998, 1176, 1178, 1239, 1384, 1407, 2523, 2681, 2693, 2942, 2957, 2984, 3007, 4219], 'Asmussen': [378], 'H.D.': [379], 'Petricoin': [380], '3rd,': [381], 'E.F.': [382], 'Liotta': [383], 'L.A.': [384, 2940], 'microarray': [386, 2988, 3715], 'strategies:': [388], 'Focus': [389], 'direct': [391], 'technologies.J.': [393], 'Immunol.': [394, 756, 1777, 1792, 2036, 2063, 2127, 2652, 3013, 4225], 'Methods.': [395, 1778, 1793, 2037, 2064, 2128, 2653, 3014, 4226], '290:': [397, 1780, 1795, 2039, 2066, 2130, 3016, 4228], '121-133Google': [398], 'Scholar)': [399, 1433, 1721, 1752], 'efforts': [405], 'studies': [407, 2825, 2885, 3380, 4010], 'function': [411], '(6.Miroux': [415, 618], 'B.': [416, 619, 1093, 1095, 2087, 2195], 'Walker': [417, 620], 'J.E.': [418, 621], 'Over-production': [419, 622], 'Escherichia': [423, 472, 626], 'coli:': [424, 627], 'Mutant': [425, 628], 'hosts': [426, 606, 629], 'that': [427, 570, 630, 702, 860, 868, 1271, 1282, 1435, 1969, 2261, 2324, 2343, 2855, 2881, 3026, 3348, 3408, 3491, 3631, 4129], 'allow': [428, 514, 631, 1320, 3325, 3810, 4152], 'synthesis': [429, 632], 'some': [431, 634, 667, 2413, 2428, 3426], 'membrane': [432, 635], 'globular': [435, 638], 'at': [437, 640, 2552], 'high': [438, 641], 'levels.J.': [439, 642], 'Mol.': [440, 643, 2211, 2752, 2996, 4095], 'Biol.': [441, 644, 2212, 2753], '1996;': [442, 645], '260:': [443, 646], '289-298Google': [444, 647], '7.Hammarstrom': [446], 'Hellgren': [448], 'N.': [449, 3479], 'van': [450], 'Den': [451], 'Berg': [452], 'Berglund': [454], 'Hard': [456], 'T.': [457, 2759], 'Rapid': [458, 1246], 'screening': [459, 1685, 2004, 2345, 3329], 'improved': [461, 3388], 'solubility': [462, 1139], 'small': [464, 896, 2833, 2851], 'produced': [467, 1884], 'fusion': [469, 1103, 1737], 'coli.Protein': [473], 'Sci.': [474, 955, 1261, 1745], '2002;': [475, 2213, 2540], '11:': [476], '313-321Google': [477], 'discuss': [484], 'issues': [486], 'strategic': [488], 'alternatives': [489], 'antibodies,': [494, 1636], 'choice': [496, 1128, 2368, 2418, 3914], 'antigen': [498, 569, 819, 965, 1621, 1629, 2226], 'advantages': [500, 2364, 2432], 'disadvantages': [502, 2434], 'different': [504, 565, 823, 1514, 1993, 2319, 2332, 2571, 2897, 3089, 3153, 3174, 3192, 3246, 3555, 3790, 3897, 4107], 'types': [505, 566, 1653, 2572, 3048, 3165, 3284, 3322, 3569], 'antibodies.': [507, 560, 1523, 1881], 'high-throughput': [515, 543, 2703, 2721, 2991, 3011, 3027, 4090, 4154, 4223], 'also': [519, 1630, 2115, 2159, 3202, 3679, 3849, 3992], 'discussed,': [521], 'well': [523, 3373, 3818, 3865], 'value': [526], 'biomedical': [535], 'research.': [536], 'One': [537, 3148, 4125, 4187], 'main': [540], 'difficulties': [541], 'production': [548, 2188, 2204, 4046], 'sufficiently': [550], 'large': [551, 832, 870, 1118, 1608, 1626, 2827, 4067], 'amounts': [552, 833, 1609, 1627, 2834], 'targets': [555], 'There': [561], 'are': [562, 726, 847, 864, 1123, 1286, 1511, 1526, 1650, 1928, 1990, 2019, 2218, 2325, 3243, 3415, 3513, 3848, 3858, 4123], 'three': [563, 1512, 3152], 'principally': [564, 1513], 'generated,': [573], 'excluding': [574], 'genetic': [575], 'immunization,': [576, 808], 'those': [578], 'are:': [579, 1454], 'full-length': [581, 592, 1038], 'proteins,': [582, 1039], 'synthetic': [584, 816, 826, 949, 1313, 1554], 'peptides,': [585], 'recombinant': [588, 601, 969, 1083, 1256, 1467, 1488, 1574, 1596, 1755], 'fragments.': [590], 'route': [594, 827], 'involves': [596], 'expression': [598, 777, 1549, 2506, 3031, 3182, 3207, 3280, 3332, 3363, 3687, 3837, 4033, 4200], 'eukaryotic': [605], 'mimic': [608], 'folding': [610], 'posttranslation': [612], 'modification': [613], 'native': [616, 651, 676, 724, 861, 1251, 1309, 1858], 'Alternatively,': [649], 'purified': [654, 673], 'from': [655, 671, 1343, 1689, 1788, 1804, 2032, 2124, 2220, 2892, 3093, 3151, 3190, 3300, 3688, 3696, 3700], 'an': [656, 1668, 2274, 2297, 2497, 2718, 2740, 2879, 2971, 3409, 3418, 3431, 3559], 'appropriate': [657], 'by': [659, 1255, 1497, 1665, 1682, 1771, 1885, 2022, 2057, 2191, 2208, 2844, 3010, 4222], 'series': [661], 'unit': [664], 'operations.': [665], 'cases,': [668, 723], 'but': [669, 1561, 1587, 2110, 3991], 'far': [670], 'always,': [672], 'fold': [677], 'obtained,': [680, 1287], 'although': [681, 1288, 1535], 'amount': [683, 1879, 2852, 2868, 3314, 3875], 'low': [688, 1328, 1353, 1543], 'compared': [690, 2270, 2337, 2887], 'other': [693, 1331, 2043, 3529, 3595], 'strategies': [694], 'described': [695], 'below.': [696], 'It': [697, 716, 3677, 3977], 'interesting': [699], 'note': [701], 'advantage': [704, 1604, 1842, 2335, 3775, 4127], 'correctly': [706, 797], 'folded': [707, 798, 862, 886, 1284], 'antigens': [708, 1518, 2101], 'during': [709, 728], 'immunization': [710, 730, 1666, 1683], 'not': [712, 718, 858, 882, 899, 2661, 3140, 3626, 3983], 'yet': [713, 4120], 'thoroughly': [714], 'investigated.': [715], 'unlikely': [719, 1281], 'that,': [720], 'many': [722, 920, 2318, 2464, 2484], 'denaturated': [727, 803, 1991, 2475], 'procedure,': [731], 'i.e.': [732, 3130, 4172], 'mixing': [734], 'mineral': [736], 'oil': [737], 'preparation': [740], "Freund's": [742], 'adjuvance': [743], '(8.Lise': [744], 'L.D.': [745], 'Audibert': [746], 'F.': [747, 1002, 1365, 1411, 3064, 3225], 'Immunoadjuvants': [748], 'analogs': [750], 'immunomodulatory': [752], 'bacterial': [753], 'structures.Curr.': [754], 'Opin.': [755], '1989;': [757], '2:': [758, 1022, 1431], '269-274Google': [759], '9.Larsson': [761], 'Graslund': [763], 'Yuan': [765], 'L.': [766, 980, 1101, 1389, 1817, 2146, 2197, 2237, 2683], 'Brundell': [767, 985, 1394], 'Hoog': [771, 995, 1404], 'Stahl': [773, 999, 1408], 'High-throughput': [775], 'cDNA': [779], 'products': [780, 1015, 1424], 'tool': [783, 2499, 2665, 3071, 3232, 3367], 'genomics.J.': [786], 'Biotechnol.': [787, 1160, 2153], '2000;': [788, 1718, 1948, 2106, 2154, 3770], '80:': [789], '143-157Google': [790], 'importance': [793, 3336], 'generating': [795, 1307, 1606], 'protein,': [799, 1962, 3564], 'which': [800, 1058, 1224, 1612, 1846, 1901, 1918, 2010, 2348, 2724, 3647, 3856, 4014], 'subsequently': [802], 'immediately': [804], 'prior': [805], 'could': [809, 1302, 3032], 'therefore': [810, 857, 2371, 2969], 'questioned.': [812], 'peptides': [817, 846, 897, 950, 1324], 'represents': [820], 'completely': [822], 'strategy.': [824], 'technically': [829, 2266], 'simple': [830], 'pure': [835, 1072], 'peptide': [836, 878, 924, 1314, 1555], 'readily': [838, 3859], 'made': [840, 1481, 1664, 1681, 1758, 2185], 'short': [843, 1042], 'time.': [844], 'less': [849, 1873, 1905, 2013], 'than': [850, 1036, 1086, 1874, 2285], '40': [851], 'amino': [852], 'acids': [853], 'it': [855, 1280, 1482, 1963, 3023], 'likely': [859, 1529], 'structures': [863, 1285], 'obtained.': [865], 'This': [866, 3523], 'means': [867], 'fraction': [871], 'obtained': [874, 3429], 'recognize': [876, 1956], 'form': [881], 'present': [883, 2558], 'target': [887, 2167], 'protein.': [888], 'linear': [892, 1569], 'epitopes': [893, 1370, 2294, 2320], 'exposed': [894, 901], 'might': [898], 'surface': [904], 'thus': [910, 3185, 3658, 3979], 'lead': [911], 'nonfunctional': [913], 'subsequent': [917, 1632, 4059], 'assays.': [918, 2333], 'However,': [919, 1862, 1952, 2280, 3936], 'examples': [921], 'successful': [923], 'have': [926, 1531, 1602, 1839, 1912, 2114, 2158, 2183, 2460, 2480, 2600, 2886, 3263, 3543, 3887, 4116], 'been': [927, 2077, 2116, 2160, 2184, 2461, 2481, 2588, 2601, 3544, 3888, 4118], 'generated': [928, 1803, 2174, 2219, 3433, 3561], 'academic': [932], 'commercial': [935, 1157, 4102], 'sector': [936], '(10.Meloen': [937], 'R.H.': [938], 'Puijk': [939], 'W.C.': [940], 'Langeveld': [941], 'J.P.': [942, 944], 'Langedijk': [943], 'Timmerman': [945], 'P.': [946, 1727, 2634, 2689, 3738, 4076], 'Design': [947], 'diagnostics.Curr.': [952], 'Pept.': [954], '4:': [957, 2711], '253-260Google': [958], 'third': [961], 'way': [962], 'produce': [964, 1487, 1517, 1740], 'generate': [968, 1967, 2008, 3682, 4195], 'fragments': [971, 1029, 1044, 1326, 1490, 1575, 2315], '(11.Agaton': [972, 1381], 'Galli': [974, 1383], 'Hoiden': [976, 1385, 1813, 2233], 'Guthenberg': [977, 1386, 1814, 2234], 'I.': [978, 990, 1180, 1387, 1399, 1815, 2235], 'Janzon': [979, 1388], 'Hansson': [981, 1390], 'Asplund': [983, 1392], 'A.': [984, 1243, 1264, 1393, 1748, 1767, 1833, 2053, 2121, 2199, 2253, 2529, 2685, 3003, 3054, 3215, 3711, 4215], 'Lindberg': [987, 1096, 1396], 'Ruthberg': [989, 1398], 'Wester': [991, 1400], 'K.': [992, 1145, 1401, 3734], 'Wurtz': [993, 1402], 'D.': [994, 1403, 1765, 2051], 'Lundeberg': [997, 1406], 'Ponten': [1001, 1410], 'chromosome': [1012, 1421, 1506], '21': [1013, 1422], 'gene': [1014, 1108, 1423, 3524], 'tissues.Mol.': [1018, 1427], '405-414Google': [1023, 1432], 'makes': [1030, 1059, 1279, 1847, 1902, 1919], 'cloning': [1032], 'procedures': [1033, 2593], 'much': [1034], 'easier': [1035], 'because': [1040, 1209, 1953, 4011], 'relatively': [1041, 1542, 1588, 1607], 'PCR': [1043], 'used.': [1047, 4024], 'tags': [1051, 1079], 'purification,': [1057], 'procedure': [1062, 2264], 'easy': [1063, 3925, 4180], 'scale-up': [1065, 2352, 3399], 'reliable': [1067], 'antigen.': [1073], 'Since': [1074], 'introduction': [1076], 'more': [1085, 2267, 2284, 3378, 3812], '20': [1087], 'years': [1088], 'ago': [1089], '(12.Uhlen': [1090], 'Nilsson': [1092], 'Guss': [1094], 'Gatenbeck': [1098], 'Philipson': [1100], 'Gene': [1102], 'vectors': [1104], 'based': [1105, 2078, 3124, 3250, 3274], 'staphylococcal': [1110], 'A.Gene.': [1112], '1983;': [1113], '23:': [1114], '369-378Google': [1115], 'Scholar),': [1116, 1196, 2041, 2109, 2157, 2657], 'number': [1119, 2898, 3411], 'tag': [1121, 1148, 1167], 'systems': [1122], 'now': [1124, 2716], 'available': [1125, 3860, 3891], 'system': [1130, 1168], 'depends': [1131, 2372], 'factors': [1133], 'ease': [1141, 1577, 2383, 4039], '(13.Terpe': [1144], 'Overview': [1146], 'fusions:': [1150], 'molecular': [1152, 2704, 2992, 3260, 4093], 'fundamentals': [1155], 'systems.Appl.': [1158], 'Microbiol.': [1159], '60:': [1162], '523-533Google': [1163], 'histidine': [1166], 'immobilized': [1173], 'metals': [1174], '(14.Porath': [1175], 'Carlsson': [1177], 'Olsson': [1179], 'Belfrage': [1181], 'G.': [1182, 1237, 1693, 2697, 2986], 'Metal': [1183], 'chelate': [1184], 'chromatography,': [1186], 'new': [1188, 2493, 2533, 2950, 3386], 'approach': [1189, 3200, 3395], 'fractionation.Nature.': [1192], '1975;': [1193, 1706], '258:': [1194], '598-599Google': [1195], 'Co': [1199], 'Ni,': [1201], 'most': [1204, 1528, 1931, 3320, 4209], 'frequently': [1205], 'system,': [1207], 'partly': [1208, 3123], 'performed': [1215, 3034], 'buffers': [1217], 'containing': [1218, 3041, 3509, 3604], 'chaotrophic': [1219], 'reagents,': [1220], 'urea,': [1223], 'allows': [1225, 1613, 2815, 3929], 'precipitated': [1226], '(inclusion': [1228], 'bodies)': [1229], 'recovered': [1232], '(15.Janknecht': [1233], 'R.': [1234, 1812, 2232, 4078], 'de': [1235], 'Martynoff': [1236], 'Lou': [1238], 'Hipskind': [1240], 'R.A.': [1241], 'Nordheim': [1242], 'andStunnenberg': [1244], 'H.G.': [1245], 'efficient': [1248, 2638], 'histidine-tagged': [1252], 'expressed': [1254, 1278, 3493, 3996], 'vaccinia': [1257], 'virus.Proc.': [1258], 'Natl.': [1259, 1743], 'Acad.': [1260, 1744], 'U.': [1262, 1746, 2982], '1991;': [1265], '88:': [1266], '8972-8976Google': [1267], 'fact': [1270], 'only': [1272, 2832, 2842, 2866, 3593, 3984], 'part': [1273], 'fully': [1283], 'careful': [1289], 'selection': [1290, 1322, 1437, 1762, 2044, 2074, 2385, 3121], 'fragment': [1293, 1318], 'domain': [1298, 3469], 'integrity': [1301], 'increase': [1303], 'probability': [1305, 2299], 'configuration.': [1310], 'Both': [1311], 'routes': [1319, 1887], 'homology': [1329], 'proteome,': [1336], 'enabling': [1337], 'information': [1342], 'genome': [1346], 'sequence': [1347], 'design': [1349, 1485, 2917, 2934], 'epitope-specific': [1350], 'risk': [1354], 'cross-reactivity': [1356, 1890], '(16.Lindskog,': [1357], 'M.,': [1358, 1362, 3061, 3222], 'Rockberg,': [1359], 'J.,': [1360], 'Uhlen,': [1361, 3060, 3221], 'Sterky,': [1364], '(2005)': [1366, 3065, 3226], 'Selection': [1367], 'production.': [1373], 'BioTechniques,': [1374], 'press.Google': [1376, 3078, 3239], 'Agaton': [1378], 'et': [1379], 'al.': [1380], 'showed': [1434, 3570, 3609], 'unique': [1440, 2861, 3346], 'regions': [1441], 'called': [1445], 'Epitope': [1447], 'Signatures': [1448], 'Tags': [1449], '(PrESTs)': [1450], '1The': [1451], 'abbreviations': [1452], 'PrEST,': [1455], 'epitope': [1457, 1959, 2450], 'signatures': [1458], 'tags;': [1459], 'pAb,': [1460], 'polyclonal': [1461, 1661, 1826, 2222, 2246], 'antibody;': [1462, 1465, 1468], 'mAb,': [1463], 'monoclonal': [1464, 1678, 1733, 1954, 2206, 2645], 'recAb,': [1466], 'msAb,': [1469], 'mono-specific': [1470, 1800], 'antibodies;': [1471], 'TMA,': [1472, 2875], 'microarrays;': [1474], 'IgG,': [1475], 'immunoglobulin': [1476], 'G;': [1477], 'PTM,': [1478], 'modification.': [1480], 'possible': [1483, 3397, 3680, 3980], 'suitable': [1491, 1849, 2014], 'generation,': [1494], 'exemplified': [1496], 'pilot': [1499], 'study': [1500, 2519, 3685, 3852], 'using': [1501, 1619, 1806, 2224, 2831, 3035, 3838, 3956, 4029, 4168], 'genes': [1503], '21.': [1507], 'conclusion,': [1509, 2357], 'there': [1510, 1649, 3857], 'ways': [1515], 'Full-length': [1524], 'correct': [1533], 'fold,': [1534], 'strategy': [1537, 1556, 1572, 2973], 'often': [1539, 1589, 1888, 1989, 2321], 'cumbersome': [1540, 4130], 'success': [1544], 'rates': [1545], 'combined': [1548, 3840], 'steps.': [1552], 'rapid': [1558, 2636, 4157], 'convenient,': [1560], 'generally': [1563, 2784], 'limited': [1564, 2867], 'epitopes.': [1570], 'combines': [1576], 'potential': [1582, 2431, 3335, 3466], 'conformational': [1585], 'epitopes,': [1586], 'yields': [1590], 'insoluble': [1591], 'inclusion': [1592], 'bodies': [1593], 'host.': [1597], 'two': [1599, 2911], 'latter': [1600], 'approaches': [1601], 'antigen,': [1611, 1900], 'ligand.': [1623], 'Availability': [1624], 'facilitates': [1631, 2349], 'quality': [1633], 'assurance': [1634], 'e.g.': [1637, 3134, 3597], 'adsorption': [1638], 'binding': [1640, 1916, 2134], 'assays': [1641, 1852], 'test': [1643], 'specificity': [1645], 'selectivity.': [1647], 'Currently,': [1648], 'four': [1651, 2913], 'major': [1652, 3114, 4026, 4126], 'analysis:': [1659], '(pAb)': [1663], 'animal,': [1669], 'rabbit,': [1672], 'hen,': [1673], 'goat,': [1674], 'rat;': [1676], '(mAb)': [1680], 'B': [1687], 'cells': [1688, 1700, 2511, 3620, 3692], 'antibody-producing': [1690], 'mouse': [1691], '(17.Kohler': [1692], 'Milstein': [1694], 'Continuous': [1696], 'cultures': [1697], 'fused': [1699], 'secreting': [1701], 'predefined': [1704], 'specificity.Nature.': [1705], '256:': [1707], '495-497Google': [1708], '18.Milstein': [1710], 'With': [1712], 'benefit': [1714, 4027], 'hindsight.Immunol.': [1716], 'Today.': [1717, 1947], '21:': [1719, 1949], '359-364Google': [1720], 'rabbit': [1723], '(19.Spieker-Polet': [1724], 'Sethupathi': [1726], 'Yam': [1728], 'P.C.': [1729], 'Knight': [1730], 'K.L.': [1731], 'Rabbit': [1732], 'antibodies:': [1734], 'Generating': [1735], 'partner': [1738], 'rabbit-rabbit': [1741], 'hybridomas.Proc.': [1742], '1995;': [1749], '92:': [1750], '9348-9352Google': [1751], 'cells;': [1753], '(recAb)': [1757], 'through': [1759, 4144], 'principles': [1763], '(20.Lipovsek': [1764, 2050], 'Pluckthun': [1766, 2052], 'In-vitro': [1768, 2054], 'evolution': [1770, 2056], 'ribosome': [1772, 2058], 'display': [1773, 2025, 2049, 2059, 2193], 'mRNA': [1775, 2061], 'display.J.': [1776, 2062, 2210], '51-67Google': [1781, 2067], '21.Bradbury': [1783], 'A.R.': [1784, 2028], 'Marks': [1785, 2029, 2088, 2200], 'J.D.': [1786, 2030, 2089, 2201], 'Antibodies': [1787, 1940, 2031], 'phage': [1789, 2024, 2033, 2091, 2192, 2209], 'libraries.J.': [1791, 2035], '29-49Google': [1796, 2040], 'Scholar);': [1797], 'iv)': [1799], '(msAb)': [1802], 'pAbs': [1805, 1838, 2312, 2479], 'antigen-specific': [1807], '(22.Agaton': [1809, 2229], 'Falk': [1811, 2231], 'Gostring': [1816, 2236], 'Selective': [1822, 2242], 'enrichment': [1823, 2243], 'monospecific': [1825, 2245], 'efforts.J.': [1831, 2251], 'Chromatogr.': [1832, 2252], '1043:': [1835, 2255], '33-40Google': [1836, 2256], 'inherent': [1841], 'multi-epitope': [1844], 'binding,': [1845], 'them': [1848, 1920, 2012], 'cross-platform': [1851], 'denatured': [1860], 'form.': [1861], 'pAb': [1868, 1883], 'reagent': [1869], '(antiserum)': [1870], 'constitute': [1872], '1%': [1875], 'total': [1878], 'Thus,': [1882], 'standard': [1886, 2931], 'show': [1889], 'lack': [1892, 3144], 'reproducibility': [1894], 'upon': [1895], 're-immunizations': [1896], 'same': [1899, 3541], 'these': [1903], 'attractive': [1906, 1921, 2972], 'renewable': [1909, 2381], 'resource.': [1910], 'mAbs': [1911, 1927, 2339], 'single': [1915, 1958, 1974, 2096, 2584, 2820, 3472, 3781], 'epitope,': [1917], 'diagnostic': [1923, 1936, 2151, 2536, 3389], 'therapeutic': [1925, 2149, 3391], 'applications.': [1926, 2355], 'currently': [1929], 'commonly': [1932], 'immunoreagents': [1934], 'applications': [1937], '(23.Borrebaeck': [1938], 'C.A.': [1939], 'diagnostics—From': [1942], 'immunoassays': [1943, 3666], 'chips.Immunol.': [1946], '379-382Google': [1950], 'difficult': [1965], 'across': [1978, 2328, 2392], 'whole': [1979, 2893], 'where': [1986], 'ways,': [1994], 'detergents': [1998], 'formalin.': [2000], 'time-consuming': [2003, 4132], 'needed': [2006, 2857], 'mAbs,': [2009, 2446], 'render': [2011], 'large-scale': [2016], 'efforts.': [2017], 'recAbs': [2018, 2190, 2341], 'selected': [2021, 2141, 3092, 3099, 3161], 'utilizing': [2023], 'technologies': [2026, 4108], '(21.Bradbury': [2027], 'principles,': [2045], 'ribosomal': [2048], 'Much': [2069], 'technology': [2075, 2677, 2715, 2814, 2951, 2968, 2989, 4031], 'has': [2076, 2362, 2587], 'recAb': [2080], 'fragments,': [2081], 'especially': [2082], 'scFvs': [2083], 'Fabs': [2085], '(24.Liu': [2086], 'Applying': [2090], 'proteomics:': [2094], 'Selecting': [2095], 'chain': [2097], 'Fv': [2098], 'blotted': [2102], 'nitrocellulose.Anal.': [2104], 'Biochem.': [2105], '286:': [2107], '119-128Google': [2108], 'alternative': [2111, 2125], 'scaffolds': [2113], '(25.Nygren': [2118], 'P.A.': [2119], 'Skerra': [2120], 'Binding': [2122], 'scaffolds.J.': [2126], '3-28Google': [2131], 'Nonproteinaceous': [2133], 'ligands,': [2135], 'aptamers': [2142], '(26.Brody': [2143], 'E.N.': [2144], 'Gold': [2145], 'Aptamers': [2147], 'agents.J.': [2152], '74:': [2155], '5-13Google': [2156], 'successfully': [2161], 'recognition': [2165], 'molecules.': [2168], 'without': [2175, 3786], 'animals': [2179], 'recently': [2181, 3264, 4117], 'attempts': [2182, 2350], 'toward': [2186, 3562], 'proteome-wide': [2187, 2203], '(27.Liu': [2194], 'Huang': [2196], 'Burlingame': [2198], 'Towards': [2202], '1:': [2214], '1063-1073Google': [2215], 'msAbs': [2217], 'antiserum': [2223, 2275], 'ligand': [2228], 'disadvantage': [2259], 'challenging': [2268], 'consisting': [2276], 'nonpurified': [2278], 'pAbs.': [2279], 'elimination': [2282], '99%': [2286], 'directed': [2290], 'other,': [2292], 'unknown': [2293], 'results': [2295, 2922], 'increased': [2298], 'obtaining': [2301], 'selective': [2303], 'reagent.': [2307, 2836], 'potentially': [2317], 'renders': [2322], 'highly': [2326, 3131], 'platform': [2330], 'An': [2334, 3904], 'no': [2344], 'needed,': [2347], 'whole-proteome': [2354, 3405], 'each': [2358, 2436, 2790, 3158, 3195, 3305, 3352], 'type': [2359], 'its': [2363, 2845], 'disadvantages.': [2366], 'factors,': [2374], 'resource,': [2382], 'screening,': [2387], 'several': [2393, 2595, 2598, 2805, 4016], 'routine': [2404], 'diagnostics': [2405, 3268], 'therapy': [2407], 'patients.': [2409], 'summary': [2411], 'considerations': [2415], 'related': [2416], 'class': [2421, 2437], 'shown': [2423, 3025, 3355, 3446], 'Table': [2425], 'I': [2426], 'comments': [2429], 'antibodies.Table': [2439], 'IComparison': [2440], 'pAbs,': [2445], 'recAbs,': [2447], 'msAbsParameterpAbmAbrecAbmsAbUniform': [2449], 'specificity–+++Renewable': [2451], 'resource+/−+++/−Need': [2452], 'animalsYesYesNoYesSuitability': [2455], 'diagnostics+++++++Suitability': [2457], 'therapeutics–apAbs': [2459], 'decades': [2465, 2485], 'vaccines': [2467, 2487], '(gammaglobulin).++/−–Suitability': [2468], '"pull-down"++/−+/−+Suitability': [2470], 'arrays+++++++Detection': [2473], 'proteins+++/−+/−++Need': [2476], 'screeningNoYesYesNoa': [2478], '(gammaglobulin).': [2488], 'Open': [2489], 'table': [2490], 'tab': [2494], 'Immunohistochemistry': [2495], 'provides': [2496, 2717, 3365], 'important': [2498, 4188], 'situ': [2502], 'visualization': [2503], 'patterns': [2507, 3183, 3208, 3333, 3633, 4203], 'tissues': [2509, 2830, 3045, 3090, 3117, 3497, 3638, 4036, 4044, 4211], '(28.Spicer': [2512], 'S.S.': [2513], 'Advantages': [2514], 'histochemistry': [2516], 'cell': [2521, 3694, 3721, 3791, 3825, 3861, 3871, 3894, 3952], 'biology.Histochem.': [2522], '1993;': [2524], '531-547Google': [2526], '29.Gown': [2528], 'Genogenic': [2530], 'immunohistochemistry:': [2531], 'era': [2534], 'immunohistochemistry.Curr.': [2537], 'Diagn.': [2538, 4096], 'Pathol.': [2539, 3769], '8:': [2541], '193-200Google': [2542], 'detect': [2547], 'localize': [2549], 'tissue,': [2553], 'cellular,': [2554], 'levels': [2557], 'deeper': [2560], 'insight': [2561], 'into': [2562, 2735, 3245], 'cellular': [2564], 'functions': [2565], 'pathogenic': [2567], 'mechanisms': [2568], 'leading': [2569], 'disease.': [2574], 'multiple': [2578, 2648, 4012], 'biopsies': [2579], 'curettages': [2581], 'paraffin': [2585, 2737], 'block': [2586, 2738, 3704], 'surgical': [2591, 3128], 'pathology': [2592], 'decades.': [2596], 'Although': [2597], 'articles': [2599], 'published': [2602, 3889], 'describing': [2603], 'improvements': [2604], 'methodology': [2606], 'usefulness': [2608], '(30.Battifora': [2611], 'multitumor': [2614], '(sausage)': [2615], 'block:': [2617], 'Novel': [2618], 'method': [2619, 2639, 3922], 'immunohistochemical': [2621, 2642], 'testing.Lab.': [2623], 'Invest.': [2624, 3726], '1986;': [2625], '55:': [2626], '244-248Google': [2627], '31.Wan': [2629], 'W.H.': [2630], 'Fortuna': [2631], 'M.B.': [2632], 'Furmanski': [2633], 'testing': [2641], 'reactivity': [2643], 'against': [2647], 'samples': [2650, 2731, 3172, 3299, 3695, 3863], 'simultaneously.J.': [2651], '1987;': [2654], '103:': [2655], '121-129Google': [2656], 'multi-tissue': [2658], 'blocks': [2659, 2895], 'did': [2660], 'become': [2662], 'powerful': [2664], 'research': [2667, 3371], 'until': [2668], 'designated': [2669], 'instruments': [2670], 'were': [2671, 3098, 3118, 3139, 3184, 3349], 'developed': [2672], 'array': [2676, 2741], 'was': [2678, 3024, 3091, 3122, 3155, 3201], 'standardized': [2679, 3037], '(32.Kononen': [2680], 'Bubendorf': [2682], 'Kallioniemi': [2684, 2698], 'Barlund': [2686], 'Schraml': [2688], 'Leighton': [2690], 'Torhorst': [2692], 'Mihatsch': [2694], 'M.J.': [2695], 'Sauter': [2696, 2985], 'O.P.': [2699, 2980], 'Tissue': [2700, 2947, 2987, 3714], 'tumor': [2707, 3255, 3458], 'specimens.Nat.': [2708], 'Med.': [2709], '1998;': [2710], '844-847Google': [2712], 'TMA': [2714, 2791, 2813, 2906, 2921, 2933, 2967, 3293, 3603, 4030], 'automated': [2719, 3801, 4064], 'array-based': [2720], 'technique,': [2722], 'up': [2725], '1,000': [2727], 'paraffin-embedded': [2729], 'assembled': [2734, 3156], 'one': [2736], 'format': [2742, 3294], '(33.Hewitt': [2743], 'S.M.': [2744, 2763], 'Design,': 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