Publication Information

{'id': 'https://openalex.org/W2081674179', 'doi': 'https://doi.org/10.1021/jp0136664', 'title': 'Protein Conformational Gate Controlling Binding Site Preference and Migration for Ubiquinone-B in the Photosynthetic Reaction Center of <i>Rhodobacter </i><i>s</i><i>phaeroides</i>', 'display_name': 'Protein Conformational Gate Controlling Binding Site Preference and Migration for Ubiquinone-B in the Photosynthetic Reaction Center of <i>Rhodobacter </i><i>s</i><i>phaeroides</i>', 'publication_year': 2002, 'publication_date': '2002-02-16', 'ids': {'openalex': 'https://openalex.org/W2081674179', 'doi': 'https://doi.org/10.1021/jp0136664', 'mag': '2081674179'}, 'language': 'en', 'primary_location': {'is_oa': False, 'landing_page_url': 'https://doi.org/10.1021/jp0136664', 'pdf_url': None, 'source': {'id': 'https://openalex.org/S185621672', 'display_name': 'The Journal of Physical Chemistry B', 'issn_l': '1520-5207', 'issn': ['1520-5207', '1520-6106'], 'is_oa': False, 'is_in_doaj': False, 'is_core': True, 'host_organization': 'https://openalex.org/P4310320006', 'host_organization_name': 'American Chemical Society', 'host_organization_lineage': ['https://openalex.org/P4310320006'], 'host_organization_lineage_names': ['American Chemical Society'], 'type': 'journal'}, 'license': None, 'license_id': None, 'version': None, 'is_accepted': False, 'is_published': False}, 'type': 'article', 'type_crossref': 'journal-article', 'indexed_in': ['crossref'], 'open_access': {'is_oa': False, 'oa_status': 'closed', 'oa_url': None, 'any_repository_has_fulltext': False}, 'authorships': [{'author_position': 'first', 'author': {'id': 'https://openalex.org/A5002887501', 'display_name': 'Susan Walden', 'orcid': 'https://orcid.org/0000-0002-6925-7176'}, 'institutions': [{'id': 'https://openalex.org/I8692664', 'display_name': 'University of Oklahoma', 'ror': 'https://ror.org/02aqsxs83', 'country_code': 'US', 'type': 'education', 'lineage': ['https://openalex.org/I8692664']}], 'countries': ['US'], 'is_corresponding': False, 'raw_author_name': 'Susan E. Walden', 'raw_affiliation_strings': ['Department of Chemistry and Biochemistry, University of Oklahoma, 620 Parrington Oval, Room 208, Norman, Oklahoma 73019.'], 'affiliations': [{'raw_affiliation_string': 'Department of Chemistry and Biochemistry, University of Oklahoma, 620 Parrington Oval, Room 208, Norman, Oklahoma 73019.', 'institution_ids': ['https://openalex.org/I8692664']}]}, {'author_position': 'last', 'author': {'id': 'https://openalex.org/A5065061819', 'display_name': 'Ralph A. Wheeler', 'orcid': 'https://orcid.org/0000-0002-4158-823X'}, 'institutions': [{'id': 'https://openalex.org/I8692664', 'display_name': 'University of Oklahoma', 'ror': 'https://ror.org/02aqsxs83', 'country_code': 'US', 'type': 'education', 'lineage': ['https://openalex.org/I8692664']}], 'countries': ['US'], 'is_corresponding': False, 'raw_author_name': 'Ralph A. Wheeler', 'raw_affiliation_strings': ['Department of Chemistry and Biochemistry, University of Oklahoma, 620 Parrington Oval, Room 208, Norman, Oklahoma 73019.'], 'affiliations': [{'raw_affiliation_string': 'Department of Chemistry and Biochemistry, University of Oklahoma, 620 Parrington Oval, Room 208, Norman, Oklahoma 73019.', 'institution_ids': ['https://openalex.org/I8692664']}]}], 'institution_assertions': [], 'countries_distinct_count': 1, 'institutions_distinct_count': 1, 'corresponding_author_ids': [], 'corresponding_institution_ids': [], 'apc_list': None, 'apc_paid': None, 'fwci': 2.033, 'has_fulltext': True, 'fulltext_origin': 'ngrams', 'cited_by_count': 30, 'citation_normalized_percentile': {'value': 0.604427, 'is_in_top_1_percent': False, 'is_in_top_10_percent': False}, 'cited_by_percentile_year': {'min': 88, 'max': 89}, 'biblio': {'volume': '106', 'issue': '11', 'first_page': '3001', 'last_page': '3006'}, 'is_retracted': False, 'is_paratext': False, 'primary_topic': {'id': 'https://openalex.org/T10303', 'display_name': 'Photosynthetic Processes and Mechanisms', 'score': 0.9999, 'subfield': {'id': 'https://openalex.org/subfields/1312', 'display_name': 'Molecular Biology'}, 'field': {'id': 'https://openalex.org/fields/13', 'display_name': 'Biochemistry, Genetics and Molecular Biology'}, 'domain': {'id': 'https://openalex.org/domains/1', 'display_name': 'Life Sciences'}}, 'topics': [{'id': 'https://openalex.org/T10303', 'display_name': 'Photosynthetic Processes and Mechanisms', 'score': 0.9999, 'subfield': {'id': 'https://openalex.org/subfields/1312', 'display_name': 'Molecular Biology'}, 'field': {'id': 'https://openalex.org/fields/13', 'display_name': 'Biochemistry, Genetics and Molecular Biology'}, 'domain': {'id': 'https://openalex.org/domains/1', 'display_name': 'Life Sciences'}}, {'id': 'https://openalex.org/T13012', 'display_name': 'Coenzyme Q10 studies and effects', 'score': 0.9962, 'subfield': {'id': 'https://openalex.org/subfields/1312', 'display_name': 'Molecular Biology'}, 'field': {'id': 'https://openalex.org/fields/13', 'display_name': 'Biochemistry, Genetics and Molecular Biology'}, 'domain': {'id': 'https://openalex.org/domains/1', 'display_name': 'Life Sciences'}}, {'id': 'https://openalex.org/T11626', 'display_name': 'Metalloenzymes and iron-sulfur proteins', 'score': 0.9937, 'subfield': {'id': 'https://openalex.org/subfields/2105', 'display_name': 'Renewable Energy, Sustainability and the Environment'}, 'field': {'id': 'https://openalex.org/fields/21', 'display_name': 'Energy'}, 'domain': {'id': 'https://openalex.org/domains/3', 'display_name': 'Physical Sciences'}}], 'keywords': [{'id': 'https://openalex.org/keywords/rhodobacter-sphaeroides', 'display_name': 'Rhodobacter sphaeroides', 'score': 0.90232545}, {'id': 'https://openalex.org/keywords/residue', 'display_name': 'Residue (chemistry)', 'score': 0.5396533}, {'id': 'https://openalex.org/keywords/electron-acceptor', 'display_name': 'Electron acceptor', 'score': 0.5154313}, {'id': 'https://openalex.org/keywords/conformational-change', 'display_name': 'Conformational change', 'score': 0.5027919}, {'id': 'https://openalex.org/keywords/rhodospirillaceae', 'display_name': 'Rhodospirillaceae', 'score': 0.49910712}, {'id': 'https://openalex.org/keywords/acceptor', 'display_name': 'Acceptor', 'score': 0.48786354}, {'id': 'https://openalex.org/keywords/purple-bacteria', 'display_name': 'Purple bacteria', 'score': 0.48748565}], 'concepts': [{'id': 'https://openalex.org/C2777897970', 'wikidata': 'https://www.wikidata.org/wiki/Q4186823', 'display_name': 'Rhodobacter sphaeroides', 'level': 3, 'score': 0.90232545}, {'id': 'https://openalex.org/C188231169', 'wikidata': 'https://www.wikidata.org/wiki/Q418676', 'display_name': 'Photosynthetic reaction centre', 'level': 3, 'score': 0.8505215}, {'id': 'https://openalex.org/C123669783', 'wikidata': 'https://www.wikidata.org/wiki/Q902898', 'display_name': 'Electron transfer', 'level': 2, 'score': 0.80761135}, {'id': 'https://openalex.org/C24840226', 'wikidata': 'https://www.wikidata.org/wiki/Q211016', 'display_name': 'Electron transport chain', 'level': 2, 'score': 0.62894326}, {'id': 'https://openalex.org/C185592680', 'wikidata': 'https://www.wikidata.org/wiki/Q2329', 'display_name': 'Chemistry', 'level': 0, 'score': 0.5512142}, {'id': 'https://openalex.org/C2781338088', 'wikidata': 'https://www.wikidata.org/wiki/Q903495', 'display_name': 'Residue (chemistry)', 'level': 2, 'score': 0.5396533}, {'id': 'https://openalex.org/C2900893', 'wikidata': 'https://www.wikidata.org/wiki/Q1231592', 'display_name': 'Electron acceptor', 'level': 2, 'score': 0.5154313}, {'id': 'https://openalex.org/C2777339483', 'wikidata': 'https://www.wikidata.org/wiki/Q647203', 'display_name': 'Conformational change', 'level': 2, 'score': 0.5027919}, {'id': 'https://openalex.org/C2779291864', 'wikidata': 'https://www.wikidata.org/wiki/Q24301', 'display_name': 'Rhodospirillaceae', 'level': 3, 'score': 0.49910712}, {'id': 'https://openalex.org/C2779892579', 'wikidata': 'https://www.wikidata.org/wiki/Q912138', 'display_name': 'Acceptor', 'level': 2, 'score': 0.48786354}, {'id': 'https://openalex.org/C2779162199', 'wikidata': 'https://www.wikidata.org/wiki/Q1335274', 'display_name': 'Purple bacteria', 'level': 4, 'score': 0.48748565}, {'id': 'https://openalex.org/C107824862', 'wikidata': 'https://www.wikidata.org/wiki/Q616005', 'display_name': 'Binding site', 'level': 2, 'score': 0.46321234}, {'id': 'https://openalex.org/C8010536', 'wikidata': 'https://www.wikidata.org/wiki/Q160398', 'display_name': 'Crystallography', 'level': 1, 'score': 0.43294656}, {'id': 'https://openalex.org/C41183919', 'wikidata': 'https://www.wikidata.org/wiki/Q423026', 'display_name': 'Active site', 'level': 3, 'score': 0.42531082}, {'id': 'https://openalex.org/C112887158', 'wikidata': 'https://www.wikidata.org/wiki/Q169324', 'display_name': 'Hydrogen bond', 'level': 3, 'score': 0.41023082}, {'id': 'https://openalex.org/C71240020', 'wikidata': 'https://www.wikidata.org/wiki/Q186011', 'display_name': 'Stereochemistry', 'level': 1, 'score': 0.3861319}, {'id': 'https://openalex.org/C183688256', 'wikidata': 'https://www.wikidata.org/wiki/Q11982', 'display_name': 'Photosynthesis', 'level': 2, 'score': 0.36491925}, {'id': 'https://openalex.org/C75473681', 'wikidata': 'https://www.wikidata.org/wiki/Q188651', 'display_name': 'Photochemistry', 'level': 1, 'score': 0.28895906}, {'id': 'https://openalex.org/C32909587', 'wikidata': 'https://www.wikidata.org/wiki/Q11369', 'display_name': 'Molecule', 'level': 2, 'score': 0.19103643}, {'id': 'https://openalex.org/C181199279', 'wikidata': 'https://www.wikidata.org/wiki/Q8047', 'display_name': 'Enzyme', 'level': 2, 'score': 0.15047991}, {'id': 'https://openalex.org/C121332964', 'wikidata': 'https://www.wikidata.org/wiki/Q413', 'display_name': 'Physics', 'level': 0, 'score': 0.1340301}, {'id': 'https://openalex.org/C55493867', 'wikidata': 'https://www.wikidata.org/wiki/Q7094', 'display_name': 'Biochemistry', 'level': 1, 'score': 0.12376323}, {'id': 'https://openalex.org/C178790620', 'wikidata': 'https://www.wikidata.org/wiki/Q11351', 'display_name': 'Organic chemistry', 'level': 1, 'score': 0.0}, {'id': 'https://openalex.org/C26873012', 'wikidata': 'https://www.wikidata.org/wiki/Q214781', 'display_name': 'Condensed matter physics', 'level': 1, 'score': 0.0}], 'mesh': [], 'locations_count': 1, 'locations': [{'is_oa': False, 'landing_page_url': 'https://doi.org/10.1021/jp0136664', 'pdf_url': None, 'source': {'id': 'https://openalex.org/S185621672', 'display_name': 'The Journal of Physical Chemistry B', 'issn_l': '1520-5207', 'issn': ['1520-5207', '1520-6106'], 'is_oa': False, 'is_in_doaj': False, 'is_core': True, 'host_organization': 'https://openalex.org/P4310320006', 'host_organization_name': 'American Chemical Society', 'host_organization_lineage': ['https://openalex.org/P4310320006'], 'host_organization_lineage_names': ['American Chemical Society'], 'type': 'journal'}, 'license': None, 'license_id': None, 'version': None, 'is_accepted': False, 'is_published': False}], 'best_oa_location': None, 'sustainable_development_goals': [{'display_name': 'Zero hunger', 'id': 'https://metadata.un.org/sdg/2', 'score': 0.43}], 'grants': [], 'datasets': [], 'versions': [], 'referenced_works_count': 33, 'referenced_works': ['https://openalex.org/W1533540035', 'https://openalex.org/W1916260872', 'https://openalex.org/W1966944745', 'https://openalex.org/W1968572229', 'https://openalex.org/W1982220024', 'https://openalex.org/W1988897802', 'https://openalex.org/W2007398791', 'https://openalex.org/W2011617747', 'https://openalex.org/W2012023753', 'https://openalex.org/W2012884658', 'https://openalex.org/W2016148525', 'https://openalex.org/W2018775222', 'https://openalex.org/W2021379468', 'https://openalex.org/W2028847265', 'https://openalex.org/W2029449965', 'https://openalex.org/W2032799034', 'https://openalex.org/W2032840029', 'https://openalex.org/W2037869037', 'https://openalex.org/W2054371325', 'https://openalex.org/W2062504397', 'https://openalex.org/W2065510140', 'https://openalex.org/W2068806840', 'https://openalex.org/W2079487673', 'https://openalex.org/W2081902883', 'https://openalex.org/W2082040139', 'https://openalex.org/W2093381148', 'https://openalex.org/W2095535137', 'https://openalex.org/W2108658741', 'https://openalex.org/W2122199548', 'https://openalex.org/W2128450134', 'https://openalex.org/W2130479394', 'https://openalex.org/W2150361933', 'https://openalex.org/W2166305691'], 'related_works': ['https://openalex.org/W652621878', 'https://openalex.org/W2741914139', 'https://openalex.org/W2245103899', 'https://openalex.org/W218709756', 'https://openalex.org/W2038976499', 'https://openalex.org/W2033987341', 'https://openalex.org/W2012823725', 'https://openalex.org/W1994237025', 'https://openalex.org/W1973204825', 'https://openalex.org/W1796709677'], 'abstract_inverted_index': {'An': [0], 'abundance': [1], 'of': [2, 12, 23, 37, 56, 107, 173], 'X-ray-derived': [3], 'structural': [4], 'data': [5], 'exists': [6], 'for': [7, 101, 123, 167, 190, 196], 'the': [8, 13, 19, 24, 35, 41, 54, 102, 105, 134, 156, 168, 187], 'photosynthetic': [9], 'reaction': [10], 'center': [11], 'purple': [14], 'bacteria': [15], 'Rhodobacter': [16], 'sphaeroides;': [17], 'yet,': [18], 'preferred': [20], 'binding': [21, 33, 112], 'site': [22, 113], 'secondary': [25], 'electron': [26, 38, 51, 197], 'acceptor': [27], 'ubiquinone': [28, 191], '(QB)': [29], 'and': [30, 193], 'how': [31], 'its': [32], 'influences': [34], 'rate': [36], 'transfer': [39], 'in': [40, 121, 133], 'system': [42], 'are': [43], 'still': [44], 'uncertain.': [45], 'Current': [46], 'hypotheses': [47], 'propose': [48], 'a': [49, 57, 119, 130], 'gated': [50], 'transfer;': [52], 'but': [53], 'identification': [55], 'gate': [58, 103, 189], 'has': [59], 'eluded': [60], 'discovery': [61], '[Stowell,': [62], 'M.': [63, 84, 89], 'H.': [64], 'B.;': [65], 'McPhillips,': [66], 'T.': [67], 'M.;': [68, 74], 'Rees,': [69], 'D.': [70], 'C.;': [71], 'Soltis,': [72], 'S.': [73], 'Abresch,': [75], 'E.;': [76], 'Feher,': [77, 86], 'G.': [78], 'Science': [79], '1997,': [80], '276,': [81], '812−816.': [82], 'Graige,': [83], 'S.;': [85], 'G.;': [87], 'Okamura,': [88], 'Y.': [90], 'Proc.': [91], 'Natl.': [92], 'Acad.': [93], 'Sci.': [94], 'U.S.A.': [95], '1998,': [96], '95,': [97], '11679−11684].': [98], 'Suggested': [99], 'possibilities': [100], 'include': [104], 'migration': [106], 'QB': [108, 124, 140, 166], 'from': [109], 'an': [110, 115], 'inactive': [111], 'to': [114, 125, 141, 147], 'electron-transfer': [116, 146], 'active': [117], 'site,': [118], 'change': [120, 132], 'orientation': [122], 'allow': [126], 'that': [127, 137, 155], 'migration,': [128], 'or': [129, 143], 'conformational': [131, 188], 'surrounding': [135], 'protein': [136], 'either': [138], 'allows': [139, 145], 'migrate': [142], 'otherwise': [144], 'occur.': [148], 'In': [149, 176], 'molecular': [150], 'dynamics': [151], 'simulations,': [152], 'we': [153], 'find': [154], 'His': [157, 174], 'L190-neighboring': [158], 'residue': [159], 'Glh': [160], '(Glu)': [161], 'L212': [162], 'can': [163], 'compete': [164], 'with': [165, 171], 'hydrogen': [169], 'bond': [170], 'Nδ': [172], 'L190.': [175], 'fact,': [177], 'this': [178], 'glutamic': [179], 'acid': [180], "residue's": [181], 'role': [182], 'could': [183], 'be': [184], 'described': [185], 'as': [186], 'binding/migration': [192], 'possibly': [194], 'even': [195], 'transfer.': [198]}, 'cited_by_api_url': 'https://api.openalex.org/works?filter=cites:W2081674179', 'counts_by_year': [{'year': 2020, 'cited_by_count': 1}, {'year': 2018, 'cited_by_count': 1}, {'year': 2015, 'cited_by_count': 1}, {'year': 2012, 'cited_by_count': 1}], 'updated_date': '2024-12-16T04:08:52.792479', 'created_date': '2016-06-24'}