Get quick answers to your questions about the article from our AI researcher chatbot
{'id': 'https://openalex.org/W2070183703', 'doi': 'https://doi.org/10.1016/j.jsb.2013.09.015', 'title': 'Xmipp 3.0: An improved software suite for image processing in electron microscopy', 'display_name': 'Xmipp 3.0: An improved software suite for image processing in electron microscopy', 'publication_year': 2013, 'publication_date': '2013-11-01', 'ids': {'openalex': 'https://openalex.org/W2070183703', 'doi': 'https://doi.org/10.1016/j.jsb.2013.09.015', 'mag': '2070183703', 'pmid': 'https://pubmed.ncbi.nlm.nih.gov/24075951'}, 'language': 'en', 'primary_location': {'is_oa': False, 'landing_page_url': 'https://doi.org/10.1016/j.jsb.2013.09.015', 'pdf_url': None, 'source': {'id': 'https://openalex.org/S89954039', 'display_name': 'Journal of Structural Biology', 'issn_l': '1047-8477', 'issn': ['1047-8477', '1095-8657'], 'is_oa': False, 'is_in_doaj': False, 'is_core': True, 'host_organization': 'https://openalex.org/P4310320990', 'host_organization_name': 'Elsevier BV', 'host_organization_lineage': ['https://openalex.org/P4310320990'], 'host_organization_lineage_names': ['Elsevier BV'], 'type': 'journal'}, 'license': None, 'license_id': None, 'version': None, 'is_accepted': False, 'is_published': False}, 'type': 'article', 'type_crossref': 'journal-article', 'indexed_in': ['crossref', 'pubmed'], 'open_access': {'is_oa': False, 'oa_status': 'closed', 'oa_url': None, 'any_repository_has_fulltext': False}, 'authorships': [{'author_position': 'first', 'author': {'id': 'https://openalex.org/A5089413306', 'display_name': 'J.M. de la Rosa-Trevín', 'orcid': 'https://orcid.org/0000-0002-3320-1269'}, 'institutions': [{'id': 'https://openalex.org/I63634437', 'display_name': 'Autonomous University of Madrid', 'ror': 'https://ror.org/01cby8j38', 'country_code': 'ES', 'type': 'education', 'lineage': ['https://openalex.org/I63634437']}, {'id': 'https://openalex.org/I4210104776', 'display_name': 'Centro Nacional de Biotecnología', 'ror': 'https://ror.org/015w4v032', 'country_code': 'ES', 'type': 'facility', 'lineage': ['https://openalex.org/I134820265', 'https://openalex.org/I4210104776']}], 'countries': ['ES'], 'is_corresponding': True, 'raw_author_name': 'J.M. de la Rosa-Trevín', 'raw_affiliation_strings': ['Biocomputing Unit, National Center for Biotechnology (CSIC), c/Darwin, 3, Campus Universidad Autónoma, 28049 Cantoblanco, Madrid, Spain', 'Escuela Politécnica Superior, Universidad Autónoma de Madrid, Campus Universidad Autónoma, 28049 Cantoblanco, Madrid, Spain'], 'affiliations': [{'raw_affiliation_string': 'Escuela Politécnica Superior, Universidad Autónoma de Madrid, Campus Universidad Autónoma, 28049 Cantoblanco, Madrid, Spain', 'institution_ids': ['https://openalex.org/I63634437']}, {'raw_affiliation_string': 'Biocomputing Unit, National Center for Biotechnology (CSIC), c/Darwin, 3, Campus Universidad Autónoma, 28049 Cantoblanco, Madrid, Spain', 'institution_ids': ['https://openalex.org/I4210104776']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5000081681', 'display_name': 'Joaquı́n Otón', 'orcid': 'https://orcid.org/0000-0002-2195-4730'}, 'institutions': [{'id': 'https://openalex.org/I4210104776', 'display_name': 'Centro Nacional de Biotecnología', 'ror': 'https://ror.org/015w4v032', 'country_code': 'ES', 'type': 'facility', 'lineage': ['https://openalex.org/I134820265', 'https://openalex.org/I4210104776']}], 'countries': ['ES'], 'is_corresponding': False, 'raw_author_name': 'J. Otón', 'raw_affiliation_strings': ['Biocomputing Unit, National Center for Biotechnology (CSIC), c/Darwin, 3, Campus Universidad Autónoma, 28049 Cantoblanco, Madrid, Spain'], 'affiliations': [{'raw_affiliation_string': 'Biocomputing Unit, National Center for Biotechnology (CSIC), c/Darwin, 3, Campus Universidad Autónoma, 28049 Cantoblanco, Madrid, Spain', 'institution_ids': ['https://openalex.org/I4210104776']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5043619276', 'display_name': 'R. Marabini', 'orcid': 'https://orcid.org/0000-0001-7876-1684'}, 'institutions': [{'id': 'https://openalex.org/I63634437', 'display_name': 'Autonomous University of Madrid', 'ror': 'https://ror.org/01cby8j38', 'country_code': 'ES', 'type': 'education', 'lineage': ['https://openalex.org/I63634437']}], 'countries': ['ES'], 'is_corresponding': False, 'raw_author_name': 'R. Marabini', 'raw_affiliation_strings': ['Escuela Politécnica Superior, Universidad Autónoma de Madrid, Campus Universidad Autónoma, 28049 Cantoblanco, Madrid, Spain'], 'affiliations': [{'raw_affiliation_string': 'Escuela Politécnica Superior, Universidad Autónoma de Madrid, Campus Universidad Autónoma, 28049 Cantoblanco, Madrid, Spain', 'institution_ids': ['https://openalex.org/I63634437']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5051207864', 'display_name': 'A. Zaldívar', 'orcid': None}, 'institutions': [{'id': 'https://openalex.org/I4210104776', 'display_name': 'Centro Nacional de Biotecnología', 'ror': 'https://ror.org/015w4v032', 'country_code': 'ES', 'type': 'facility', 'lineage': ['https://openalex.org/I134820265', 'https://openalex.org/I4210104776']}], 'countries': ['ES'], 'is_corresponding': False, 'raw_author_name': 'A. Zaldívar', 'raw_affiliation_strings': ['Biocomputing Unit, National Center for Biotechnology (CSIC), c/Darwin, 3, Campus Universidad Autónoma, 28049 Cantoblanco, Madrid, Spain'], 'affiliations': [{'raw_affiliation_string': 'Biocomputing Unit, National Center for Biotechnology (CSIC), c/Darwin, 3, Campus Universidad Autónoma, 28049 Cantoblanco, Madrid, Spain', 'institution_ids': ['https://openalex.org/I4210104776']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5000855081', 'display_name': 'Javier Vargas', 'orcid': 'https://orcid.org/0000-0001-7519-6106'}, 'institutions': [{'id': 'https://openalex.org/I4210104776', 'display_name': 'Centro Nacional de Biotecnología', 'ror': 'https://ror.org/015w4v032', 'country_code': 'ES', 'type': 'facility', 'lineage': ['https://openalex.org/I134820265', 'https://openalex.org/I4210104776']}], 'countries': ['ES'], 'is_corresponding': False, 'raw_author_name': 'J. Vargas', 'raw_affiliation_strings': ['Biocomputing Unit, National Center for Biotechnology (CSIC), c/Darwin, 3, Campus Universidad Autónoma, 28049 Cantoblanco, Madrid, Spain'], 'affiliations': [{'raw_affiliation_string': 'Biocomputing Unit, National Center for Biotechnology (CSIC), c/Darwin, 3, Campus Universidad Autónoma, 28049 Cantoblanco, Madrid, Spain', 'institution_ids': ['https://openalex.org/I4210104776']}]}, {'author_position': 'middle', 'author': {'id': 'https://openalex.org/A5046960969', 'display_name': 'J.M. Carazo', 'orcid': 'https://orcid.org/0000-0003-0788-8447'}, 'institutions': [{'id': 'https://openalex.org/I4210104776', 'display_name': 'Centro Nacional de Biotecnología', 'ror': 'https://ror.org/015w4v032', 'country_code': 'ES', 'type': 'facility', 'lineage': ['https://openalex.org/I134820265', 'https://openalex.org/I4210104776']}], 'countries': ['ES'], 'is_corresponding': False, 'raw_author_name': 'J.M. Carazo', 'raw_affiliation_strings': ['Biocomputing Unit, National Center for Biotechnology (CSIC), c/Darwin, 3, Campus Universidad Autónoma, 28049 Cantoblanco, Madrid, Spain'], 'affiliations': [{'raw_affiliation_string': 'Biocomputing Unit, National Center for Biotechnology (CSIC), c/Darwin, 3, Campus Universidad Autónoma, 28049 Cantoblanco, Madrid, Spain', 'institution_ids': ['https://openalex.org/I4210104776']}]}, {'author_position': 'last', 'author': {'id': 'https://openalex.org/A5007117539', 'display_name': 'Carlos Óscar S. Sorzano', 'orcid': 'https://orcid.org/0000-0002-9473-283X'}, 'institutions': [{'id': 'https://openalex.org/I118091203', 'display_name': 'Universidad San Pablo CEU', 'ror': 'https://ror.org/00tvate34', 'country_code': 'ES', 'type': 'education', 'lineage': ['https://openalex.org/I118091203', 'https://openalex.org/I2801318690']}, {'id': 'https://openalex.org/I4210104776', 'display_name': 'Centro Nacional de Biotecnología', 'ror': 'https://ror.org/015w4v032', 'country_code': 'ES', 'type': 'facility', 'lineage': ['https://openalex.org/I134820265', 'https://openalex.org/I4210104776']}], 'countries': ['ES'], 'is_corresponding': False, 'raw_author_name': 'C.O.S. Sorzano', 'raw_affiliation_strings': ['Biocomputing Unit, National Center for Biotechnology (CSIC), c/Darwin, 3, Campus Universidad Autónoma, 28049 Cantoblanco, Madrid, Spain', 'Bioengineering Lab., Universidad CEU San Pablo, Campus Urb. Montepríncipe s/n, 28668 Boadilla del Monte, Madrid, Spain'], 'affiliations': [{'raw_affiliation_string': 'Bioengineering Lab., Universidad CEU San Pablo, Campus Urb. Montepríncipe s/n, 28668 Boadilla del Monte, Madrid, Spain', 'institution_ids': ['https://openalex.org/I118091203']}, {'raw_affiliation_string': 'Biocomputing Unit, National Center for Biotechnology (CSIC), c/Darwin, 3, Campus Universidad Autónoma, 28049 Cantoblanco, Madrid, Spain', 'institution_ids': ['https://openalex.org/I4210104776']}]}], 'countries_distinct_count': 1, 'institutions_distinct_count': 3, 'corresponding_author_ids': ['https://openalex.org/A5089413306'], 'corresponding_institution_ids': ['https://openalex.org/I63634437', 'https://openalex.org/I4210104776'], 'apc_list': {'value': 4100, 'currency': 'USD', 'value_usd': 4100, 'provenance': 'doaj'}, 'apc_paid': None, 'fwci': 5.6, 'has_fulltext': True, 'fulltext_origin': 'ngrams', 'cited_by_count': 296, 'citation_normalized_percentile': {'value': 0.896761, 'is_in_top_1_percent': False, 'is_in_top_10_percent': False}, 'cited_by_percentile_year': {'min': 99, 'max': 100}, 'biblio': {'volume': '184', 'issue': '2', 'first_page': '321', 'last_page': '328'}, 'is_retracted': False, 'is_paratext': False, 'primary_topic': {'id': 'https://openalex.org/T10857', 'display_name': 'Cryo-Electron Microscopy Techniques', 'score': 1.0, 'subfield': {'id': 'https://openalex.org/subfields/1315', 'display_name': 'Structural Biology'}, 'field': {'id': 'https://openalex.org/fields/13', 'display_name': 'Biochemistry, Genetics and Molecular Biology'}, 'domain': {'id': 'https://openalex.org/domains/1', 'display_name': 'Life Sciences'}}, 'topics': [{'id': 'https://openalex.org/T10857', 'display_name': 'Cryo-Electron Microscopy Techniques', 'score': 1.0, 'subfield': {'id': 'https://openalex.org/subfields/1315', 'display_name': 'Structural Biology'}, 'field': {'id': 'https://openalex.org/fields/13', 'display_name': 'Biochemistry, Genetics and Molecular Biology'}, 'domain': {'id': 'https://openalex.org/domains/1', 'display_name': 'Life Sciences'}}, {'id': 'https://openalex.org/T12039', 'display_name': 'Surface Analysis and Electron Spectroscopy Techniques', 'score': 0.999, 'subfield': {'id': 'https://openalex.org/subfields/2508', 'display_name': 'Surfaces, Coatings and Films'}, 'field': {'id': 'https://openalex.org/fields/25', 'display_name': 'Materials Science'}, 'domain': {'id': 'https://openalex.org/domains/3', 'display_name': 'Physical Sciences'}}, {'id': 'https://openalex.org/T11183', 'display_name': 'X-ray Imaging Techniques and Applications', 'score': 0.9861, 'subfield': {'id': 'https://openalex.org/subfields/3108', 'display_name': 'Radiation'}, 'field': {'id': 'https://openalex.org/fields/31', 'display_name': 'Physics and Astronomy'}, 'domain': {'id': 'https://openalex.org/domains/3', 'display_name': 'Physical Sciences'}}], 'keywords': [{'id': 'https://openalex.org/keywords/software-suite', 'display_name': 'Software suite', 'score': 0.7118763}, {'id': 'https://openalex.org/keywords/code-refactoring', 'display_name': 'Code refactoring', 'score': 0.5775219}, {'id': 'https://openalex.org/keywords/interoperation', 'display_name': 'Interoperation', 'score': 0.57502365}, {'id': 'https://openalex.org/keywords/image-processing', 'display_name': 'Image Processing', 'score': 0.519769}, {'id': 'https://openalex.org/keywords/python', 'display_name': 'Python (programming language)', 'score': 0.4366929}, {'id': 'https://openalex.org/keywords/code', 'display_name': 'Code (set theory)', 'score': 0.41192567}], 'concepts': [{'id': 'https://openalex.org/C41008148', 'wikidata': 'https://www.wikidata.org/wiki/Q21198', 'display_name': 'Computer science', 'level': 0, 'score': 0.7688898}, {'id': 'https://openalex.org/C2778736646', 'wikidata': 'https://www.wikidata.org/wiki/Q1143070', 'display_name': 'Software suite', 'level': 3, 'score': 0.7118763}, {'id': 'https://openalex.org/C79581498', 'wikidata': 'https://www.wikidata.org/wiki/Q1367530', 'display_name': 'Suite', 'level': 2, 'score': 0.69838566}, {'id': 'https://openalex.org/C2777904410', 'wikidata': 'https://www.wikidata.org/wiki/Q7397', 'display_name': 'Software', 'level': 2, 'score': 0.69571567}, {'id': 'https://openalex.org/C36464697', 'wikidata': 'https://www.wikidata.org/wiki/Q451553', 'display_name': 'Visualization', 'level': 2, 'score': 0.65636855}, {'id': 'https://openalex.org/C177212765', 'wikidata': 'https://www.wikidata.org/wiki/Q627335', 'display_name': 'Workflow', 'level': 2, 'score': 0.6521162}, {'id': 'https://openalex.org/C152752567', 'wikidata': 'https://www.wikidata.org/wiki/Q116877', 'display_name': 'Code refactoring', 'level': 3, 'score': 0.5775219}, {'id': 'https://openalex.org/C139458680', 'wikidata': 'https://www.wikidata.org/wiki/Q12184942', 'display_name': 'Interoperation', 'level': 3, 'score': 0.57502365}, {'id': 'https://openalex.org/C121684516', 'wikidata': 'https://www.wikidata.org/wiki/Q7600677', 'display_name': 'Computer graphics (images)', 'level': 1, 'score': 0.5535694}, {'id': 'https://openalex.org/C177264268', 'wikidata': 'https://www.wikidata.org/wiki/Q1514741', 'display_name': 'Set (abstract data type)', 'level': 2, 'score': 0.4812036}, {'id': 'https://openalex.org/C115903868', 'wikidata': 'https://www.wikidata.org/wiki/Q80993', 'display_name': 'Software engineering', 'level': 1, 'score': 0.47245243}, {'id': 'https://openalex.org/C9417928', 'wikidata': 'https://www.wikidata.org/wiki/Q1070689', 'display_name': 'Image processing', 'level': 3, 'score': 0.47218457}, {'id': 'https://openalex.org/C61423126', 'wikidata': 'https://www.wikidata.org/wiki/Q187432', 'display_name': 'Scripting language', 'level': 2, 'score': 0.45981085}, {'id': 'https://openalex.org/C519991488', 'wikidata': 'https://www.wikidata.org/wiki/Q28865', 'display_name': 'Python (programming language)', 'level': 2, 'score': 0.4366929}, {'id': 'https://openalex.org/C459310', 'wikidata': 'https://www.wikidata.org/wiki/Q117801', 'display_name': 'Computational science', 'level': 1, 'score': 0.43584386}, {'id': 'https://openalex.org/C43126263', 'wikidata': 'https://www.wikidata.org/wiki/Q128751', 'display_name': 'Source code', 'level': 2, 'score': 0.42954645}, {'id': 'https://openalex.org/C26517878', 'wikidata': 'https://www.wikidata.org/wiki/Q228039', 'display_name': 'Key (lock)', 'level': 2, 'score': 0.41820213}, {'id': 'https://openalex.org/C2776760102', 'wikidata': 'https://www.wikidata.org/wiki/Q5139990', 'display_name': 'Code (set theory)', 'level': 3, 'score': 0.41192567}, {'id': 'https://openalex.org/C124101348', 'wikidata': 'https://www.wikidata.org/wiki/Q172491', 'display_name': 'Data mining', 'level': 1, 'score': 0.40124005}, {'id': 'https://openalex.org/C199360897', 'wikidata': 'https://www.wikidata.org/wiki/Q9143', 'display_name': 'Programming language', 'level': 1, 'score': 0.28407806}, {'id': 'https://openalex.org/C77088390', 'wikidata': 'https://www.wikidata.org/wiki/Q8513', 'display_name': 'Database', 'level': 1, 'score': 0.24782723}, {'id': 'https://openalex.org/C154945302', 'wikidata': 'https://www.wikidata.org/wiki/Q11660', 'display_name': 'Artificial intelligence', 'level': 1, 'score': 0.2439779}, {'id': 'https://openalex.org/C115961682', 'wikidata': 'https://www.wikidata.org/wiki/Q860623', 'display_name': 'Image (mathematics)', 'level': 2, 'score': 0.24174434}, {'id': 'https://openalex.org/C111919701', 'wikidata': 'https://www.wikidata.org/wiki/Q9135', 'display_name': 'Operating system', 'level': 1, 'score': 0.2292276}, {'id': 'https://openalex.org/C20136886', 'wikidata': 'https://www.wikidata.org/wiki/Q749647', 'display_name': 'Interoperability', 'level': 2, 'score': 0.12884635}, {'id': 'https://openalex.org/C166957645', 'wikidata': 'https://www.wikidata.org/wiki/Q23498', 'display_name': 'Archaeology', 'level': 1, 'score': 0.0}, {'id': 'https://openalex.org/C95457728', 'wikidata': 'https://www.wikidata.org/wiki/Q309', 'display_name': 'History', 'level': 0, 'score': 0.0}], 'mesh': [{'descriptor_ui': 'D021621', 'descriptor_name': 'Imaging, Three-Dimensional', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': True}, {'descriptor_ui': 'D014584', 'descriptor_name': 'User-Computer Interface', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': True}, {'descriptor_ui': 'D008854', 'descriptor_name': 'Microscopy, Electron', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D008958', 'descriptor_name': 'Models, Molecular', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D058996', 'descriptor_name': 'Quality Improvement', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}], 'locations_count': 2, 'locations': [{'is_oa': False, 'landing_page_url': 'https://doi.org/10.1016/j.jsb.2013.09.015', 'pdf_url': None, 'source': {'id': 'https://openalex.org/S89954039', 'display_name': 'Journal of Structural Biology', 'issn_l': '1047-8477', 'issn': ['1047-8477', '1095-8657'], 'is_oa': False, 'is_in_doaj': False, 'is_core': True, 'host_organization': 'https://openalex.org/P4310320990', 'host_organization_name': 'Elsevier BV', 'host_organization_lineage': ['https://openalex.org/P4310320990'], 'host_organization_lineage_names': ['Elsevier BV'], 'type': 'journal'}, 'license': None, 'license_id': None, 'version': None, 'is_accepted': False, 'is_published': False}, {'is_oa': False, 'landing_page_url': 'https://pubmed.ncbi.nlm.nih.gov/24075951', 'pdf_url': None, 'source': {'id': 'https://openalex.org/S4306525036', 'display_name': 'PubMed', 'issn_l': None, 'issn': None, 'is_oa': False, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I1299303238', 'host_organization_name': 'National Institutes of Health', 'host_organization_lineage': ['https://openalex.org/I1299303238'], 'host_organization_lineage_names': ['National Institutes of Health'], 'type': 'repository'}, 'license': None, 'license_id': None, 'version': None, 'is_accepted': False, 'is_published': False}], 'best_oa_location': None, 'sustainable_development_goals': [{'id': 'https://metadata.un.org/sdg/9', 'display_name': 'Industry, innovation and infrastructure', 'score': 0.55}], 'grants': [], 'datasets': [], 'versions': [], 'referenced_works_count': 40, 'referenced_works': ['https://openalex.org/W10159541', 'https://openalex.org/W1486850686', 'https://openalex.org/W1749839265', 'https://openalex.org/W1965581896', 'https://openalex.org/W1967303488', 'https://openalex.org/W1983751391', 'https://openalex.org/W1991408027', 'https://openalex.org/W2006158980', 'https://openalex.org/W2013831456', 'https://openalex.org/W2015628141', 'https://openalex.org/W2016675163', 'https://openalex.org/W2017292564', 'https://openalex.org/W2017797223', 'https://openalex.org/W2026230069', 'https://openalex.org/W2027306662', 'https://openalex.org/W2028958224', 'https://openalex.org/W2032146255', 'https://openalex.org/W2032779961', 'https://openalex.org/W2035460215', 'https://openalex.org/W2035840997', 'https://openalex.org/W2044319700', 'https://openalex.org/W2047327060', 'https://openalex.org/W2048982317', 'https://openalex.org/W2056713455', 'https://openalex.org/W2065623919', 'https://openalex.org/W2068654340', 'https://openalex.org/W2072879417', 'https://openalex.org/W2073949924', 'https://openalex.org/W2078706180', 'https://openalex.org/W2100455255', 'https://openalex.org/W2107255882', 'https://openalex.org/W2110785947', 'https://openalex.org/W2122633401', 'https://openalex.org/W2132629607', 'https://openalex.org/W2138440954', 'https://openalex.org/W2138825607', 'https://openalex.org/W2140092984', 'https://openalex.org/W2150945683', 'https://openalex.org/W2167488177', 'https://openalex.org/W2466281853'], 'related_works': ['https://openalex.org/W4389060420', 'https://openalex.org/W4313549863', 'https://openalex.org/W4231266416', 'https://openalex.org/W2991900792', 'https://openalex.org/W2384389666', 'https://openalex.org/W2146911282', 'https://openalex.org/W2088986462', 'https://openalex.org/W1985388819', 'https://openalex.org/W1983817081', 'https://openalex.org/W194942058'], 'abstract_inverted_index': {'Xmipp': [0, 30, 142, 169], 'is': [1, 14, 49, 68, 170, 175], 'a': [2, 32, 53, 92, 146, 149], 'specialized': [3], 'software': [4], 'package': [5, 173], 'for': [6, 127, 160, 178], 'image': [7, 122], 'processing': [8, 59], 'in': [9], 'electron': [10], 'microscopy,': [11], 'and': [12, 39, 74, 108, 163], 'that': [13, 55, 111, 174], 'mainly': [15], 'focused': [16], 'on': [17], '3D': [18], 'reconstruction': [19], 'of': [20, 52, 87, 116, 148], 'macromolecules': [21], 'through': [22], 'single-particles': [23], 'analysis.': [24], 'In': [25], 'this': [26], 'article': [27], 'we': [28], 'present': [29], '3.0,': [31], 'major': [33], 'release': [34], 'which': [35], 'introduces': [36], 'several': [37], 'improvements': [38], 'new': [40], 'developments': [41, 162], 'over': [42], 'the': [43, 50, 57, 84, 113, 138, 153], 'previous': [44], 'version.': [45], 'A': [46], 'central': [47], 'improvement': [48], 'concept': [51], 'project': [54], 'stores': [56], 'entire': [58], 'workflow': [60], 'from': [61, 129], 'data': [62, 104], 'import': [63], 'to': [64, 71, 91], 'final': [65], 'results.': [66], 'It': [67], 'now': [69], 'possible': [70], 'monitor,': [72], 'reproduce': [73], 'restart': [75], 'all': [76, 130, 164], 'computing': [77], 'tasks': [78, 89], 'as': [79, 81, 103, 145], 'well': [80], 'graphically': [82], 'explore': [83], 'complete': [85], 'set': [86], 'interrelated': [88], 'associated': [90], 'given': [93], 'project.': [94], 'Other': [95], 'graphical': [96], 'tools': [97], 'have': [98, 134], 'also': [99], 'been': [100, 135, 167], 'improved': [101], 'such': [102], 'visualization,': [105], 'particle': [106], 'picking': [107], 'parameter': [109], '“wizards”': [110], 'allow': [112], 'visual': [114], 'selection': [115], 'some': [117], 'key': [118], 'parameters.': [119], 'Many': [120], 'standard': [121], 'formats': [123], 'are': [124, 157], 'transparently': [125], 'supported': [126], 'input/output': [128], 'programs.': [131, 143], 'Additionally,': [132], 'results': [133], 'standardized,': [136], 'facilitating': [137], 'interoperation': [139], 'between': [140], 'different': [141], 'Finally,': [144], 'result': [147], 'large': [150], 'code': [151, 165], 'refactoring,': [152], 'underlying': [154], 'C++': [155], 'libraries': [156], 'better': [158], 'suited': [159], 'future': [161], 'has': [166], 'optimized.': [168], 'an': [171], 'open-source': [172], 'freely': [176], 'available': [177], 'download': [179], 'from:': [180], 'http://xmipp.cnb.csic.es.': [181]}, 'cited_by_api_url': 'https://api.openalex.org/works?filter=cites:W2070183703', 'counts_by_year': [{'year': 2024, 'cited_by_count': 18}, {'year': 2023, 'cited_by_count': 30}, {'year': 2022, 'cited_by_count': 36}, {'year': 2021, 'cited_by_count': 29}, {'year': 2020, 'cited_by_count': 41}, {'year': 2019, 'cited_by_count': 32}, {'year': 2018, 'cited_by_count': 21}, {'year': 2017, 'cited_by_count': 30}, {'year': 2016, 'cited_by_count': 33}, {'year': 2015, 'cited_by_count': 16}, {'year': 2014, 'cited_by_count': 9}], 'updated_date': '2024-09-09T17:27:35.992291', 'created_date': '2016-06-24'}