Structural Rationalization for the Lack of Stereospecificity in Coenzyme B12-dependent Diol Dehydratase

Name: Work Video:
Duration: 3 min 30 s
Naoki Shibata; Yuka Nakanishi; Masaki Fukuoka; Mamoru Yamanishi; Noritake Yasuoka; Tetsuo Toraya
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35, 250, 284, 526, 610, 774, 1380, 1454, 1802, 2133, 2175, 2189, 3612, 3939], 'dehydratase': [2, 36, 251, 285, 527, 775, 1381, 1455, 1803, 2176, 2190, 2272, 3769], 'of': [3, 14, 26, 34, 71, 130, 134, 147, 162, 185, 201, 206, 211, 232, 244, 252, 263, 275, 283, 320, 379, 383, 396, 411, 434, 450, 455, 460, 481, 493, 573, 604, 607, 609, 615, 724, 727, 735, 772, 836, 849, 862, 877, 952, 974, 1014, 1154, 1159, 1174, 1238, 1374, 1517, 1537, 1565, 1569, 1577, 1625, 1630, 1636, 1647, 1801, 1961, 1970, 2031, 2037, 2125, 2139, 2150, 2173, 2225, 2262, 2266, 2273, 2289, 2430, 2435, 2483, 2488, 2603, 2621, 2640, 2646, 2659, 2670, 2696, 2699, 2731, 2788, 2805, 2808, 2822, 2878, 2889, 2897, 2919, 2981, 2993, 3088, 3114, 3126, 3130, 3141, 3150, 3181, 3188, 3192, 3203, 3213, 3225, 3240, 3255, 3276, 3290, 3298, 3342, 3345, 3364, 3374, 3383, 3393, 3411, 3417, 3424, 3427, 3440, 3446, 3453, 3462, 3526, 3533, 3591, 3600, 3602, 3611, 3619, 3635, 3663, 3685, 3725, 3767, 3836, 3846, 3850, 3856, 3860, 3930, 3942, 3975, 3999, 4004, 4019, 4102, 4106, 4112, 4119, 4165, 4174, 4196, 4215, 4240, 4249, 4260, 4281, 4290, 4299, 4310, 4331, 4344], 'Klebsiella': [4, 253, 2274], 'oxytoca': [5, 254, 2275], 'is': [6, 81, 175, 255, 330, 424, 617, 625, 690, 722, 782, 828, 844, 964, 1023, 1477, 2191, 3145, 3158, 3198, 3220, 3251, 3263, 3379, 3761, 3842, 3927, 4262, 4266, 4312, 4316], 'apparently': [7, 256, 2192], 'not': [8, 257, 567, 2193, 3919], 'stereospecific': [9, 258, 501, 568, 2194, 2211], 'and': [10, 17, 41, 46, 61, 90, 95, 126, 137, 223, 235, 241, 259, 266, 290, 295, 310, 339, 344, 375, 386, 472, 484, 490, 569, 576, 741, 756, 814, 821, 846, 881, 883, 925, 946, 954, 1021, 1062, 1162, 1240, 1251, 1387, 1458, 1466, 1473, 1515, 1585, 1601, 1628, 1934, 1959, 1976, 1978, 1980, 2120, 2141, 2143, 2165, 2181, 2201, 2232, 2256, 2264, 2283, 2366, 2383, 2408, 2423, 2441, 2468, 2522, 2618, 2627, 2688, 2708, 2712, 2766, 2832, 2858, 2998, 3007, 3014, 3017, 3108, 3123, 3171, 3209, 3268, 3330, 3339, 3356, 3372, 3390, 3444, 3461, 3473, 3475, 3504, 3604, 3621, 3627, 3660, 3821, 3833, 3848, 3852, 3858, 3867, 3887, 3890, 3935, 3948, 3969, 3977, 4007, 4097, 4109, 4178, 4199, 4207, 4234, 4247, 4254, 4297, 4304], 'catalyzes': [11, 260, 570], 'the': [12, 27, 31, 55, 59, 62, 66, 69, 72, 76, 84, 88, 102, 117, 131, 135, 159, 165, 172, 183, 186, 199, 202, 207, 212, 230, 233, 245, 261, 276, 280, 304, 308, 311, 315, 318, 321, 325, 333, 337, 351, 366, 380, 384, 408, 414, 421, 432, 435, 448, 451, 456, 461, 479, 482, 494, 571, 602, 620, 623, 632, 694, 702, 725, 739, 746, 762, 765, 773, 779, 847, 850, 857, 863, 868, 874, 878, 900, 944, 967, 975, 1011, 1054, 1058, 1138, 1155, 1160, 1175, 1376, 1453, 1461, 1495, 1538, 1553, 1558, 1563, 1566, 1570, 1575, 1578, 1582, 1595, 1608, 1623, 1626, 1631, 1798, 1962, 1967, 2015, 2021, 2024, 2029, 2040, 2123, 2128, 2132, 2137, 2151, 2162, 2166, 2170, 2174, 2179, 2186, 2196, 2286, 2290, 2353, 2367, 2412, 2437, 2497, 2589, 2596, 2622, 2634, 2638, 2644, 2657, 2678, 2789, 2798, 2816, 2827, 2892, 2901, 2906, 2913, 2917, 2978, 3011, 3021, 3030, 3051, 3067, 3079, 3096, 3115, 3127, 3131, 3138, 3142, 3151, 3159, 3162, 3168, 3175, 3179, 3185, 3189, 3193, 3204, 3210, 3214, 3226, 3241, 3248, 3256, 3277, 3281, 3287, 3291, 3295, 3299, 3336, 3365, 3368, 3375, 3384, 3394, 3399, 3408, 3422, 3425, 3431, 3436, 3441, 3447, 3454, 3458, 3463, 3467, 3527, 3531, 3537, 3545, 3549, 3557, 3561, 3569, 3573, 3581, 3589, 3617, 3646, 3650, 3658, 3661, 3664, 3668, 3673, 3678, 3683, 3726, 3729, 3735, 3740, 3748, 3758, 3764, 3816, 3822, 3828, 3831, 3837, 3872, 3876, 3920, 3933, 3967, 4000, 4005, 4020, 4100, 4103, 4107, 4113, 4120, 4124, 4130, 4162, 4166, 4175, 4179, 4185, 4197, 4205, 4212, 4216, 4223, 4229, 4241, 4271, 4275, 4282, 4286, 4291, 4321, 4325, 4332, 4341], 'conversion': [13, 262, 572], 'both': [15, 264, 574, 2587, 2676, 2881, 2985, 3388, 3428, 3636], '(R)-': [16, 42, 45, 94, 136, 234, 265, 291, 294, 343, 385, 483, 575, 740, 2140, 2180, 2405, 2420, 2463, 2489, 3389, 3603, 3620, 3832, 3866, 3934, 3976, 4108, 4198, 4206], '(S)-1,2-propanediol': [18, 267, 2407, 2809, 2823, 3665, 4300], 'to': [19, 86, 109, 158, 268, 335, 358, 407, 578, 600, 745, 842, 892, 899, 958, 1157, 1172, 1180, 1540, 1562, 1607, 1622, 1642, 1966, 2020, 2121, 2432, 2472, 2608, 2662, 2666, 2802, 2815, 2895, 3588, 3606, 3641, 3667, 3728, 3757, 3763, 3844, 3854, 3871, 3981, 4002, 4017, 4194, 4211, 4228, 4244, 4268, 4294, 4323], 'propionaldehyde.': [20, 269], 'To': [21, 270, 2116], 'explain': [22, 271], 'this': [23, 272, 2118, 3155, 3272, 3916], 'unusual': [24, 273], 'property': [25, 274], 'enzyme,': [28, 277, 858], 'we': [29, 278, 2130, 2168, 2975, 3863], 'analyzed': [30, 279, 2144], 'crystal': [32, 281, 1799, 2163, 2602, 2679, 3132], 'structures': [33, 282, 1635, 1800, 2164, 2914, 3133, 3610, 3634, 4101], 'in': [37, 50, 75, 101, 116, 229, 286, 299, 324, 350, 365, 478, 582, 748, 1053, 1164, 1527, 1545, 1552, 1804, 2028, 2136, 2210, 2280, 2637, 2651, 2912, 2916, 3037, 3047, 3063, 3075, 3092, 3102, 3271, 3280, 3530, 3616, 3655, 3677, 3682, 3830, 3875, 4009, 4123, 4218], 'complexes': [38, 287, 1805, 2135, 3614, 3637], 'with': [39, 198, 288, 447, 622, 631, 752, 859, 906, 970, 1019, 1806, 1881, 2039, 2127, 2178, 2230, 2357, 2371, 2395, 2411, 2443, 2685, 2838, 2991, 3235, 3350, 3359, 3492, 3882, 4226], 'cyanocobalamin': [40, 289], 'or': [43, 292, 513, 1855, 2406, 2421, 2464, 2490], '(S)-1,2-propanediol.': [44, 293, 2898], '(S)-isomers': [47, 296, 742], 'are': [48, 65, 247, 297, 314, 496, 499, 743, 817, 1029, 1460, 1964, 3035, 3049, 3065, 3077, 3094, 3233, 3284, 3333, 3479, 3586, 3827, 3869, 4209, 4251, 4301, 4336], 'bound': [49, 298, 744, 2013, 3648, 3762, 3870, 3937, 4210], 'a': [51, 112, 191, 300, 361, 440, 698, 885, 1149, 1165, 1169, 1467, 1474, 1481, 1490, 1529, 1591, 1598, 1614, 2242, 2363, 2433, 2506, 2609, 2663, 2667, 2683, 2686, 3103, 3362, 3718, 3897, 3994, 4010, 4014, 4219], 'symmetrical': [52, 301, 4220], 'manner,': [53, 302], 'although': [54, 303, 2023, 2198], 'hydrogen-bonding': [56, 305, 3817], 'interactions': [57, 306, 3818], 'between': [58, 307, 3005, 3015, 3370, 3438, 3819], 'substrate': [60, 103, 309, 352, 1156, 1539, 1604, 1955, 1963, 2982, 3250, 3820, 4001], 'active-site': [63, 312, 3128, 3823], 'residues': [64, 313, 3826], 'same.': [67, 316], 'From': [68, 317, 1371], 'position': [70, 319, 2894, 4118], 'adenosyl': [73, 322, 1583, 1588, 3278, 3292, 3442, 4121, 4168, 4242, 4272, 4292], 'radical': [74, 85, 153, 174, 323, 334, 402, 423, 1243, 1584, 1589, 1600, 1605, 4122, 4243, 4273, 4293, 4322], 'modeled': [77, 326, 3483], '"distal"': [78, 327, 3282], 'conformation,': [79, 328], 'it': [80, 329, 3922, 4265, 4315], 'reasonable': [82, 331, 4267, 4319], 'for': [83, 332, 502, 1379, 1493, 1547, 2195, 2633, 2792, 2797, 2984, 3010, 3020, 3029, 3050, 3066, 3078, 3095, 3120, 3161, 3167, 3174, 3265, 3327, 3387, 3645, 3721, 3739, 3747, 4320], 'abstract': [87, 336, 4324], 'pro-R': [89, 338, 947, 3968, 4276], 'pro-S': [91, 340, 945, 3970, 4326], 'hydrogens': [92, 341], 'from': [93, 107, 142, 169, 194, 342, 356, 391, 418, 443, 819, 840, 1152, 1480, 1533, 1594, 1618, 2155, 2216, 2244, 2352, 2826, 2880, 3286, 3481, 3542, 3554, 3566, 3578, 3745, 3945, 3997, 4238, 4279, 4288, 4329, 4340], '(S)-isomers,': [96, 138, 236, 345, 387, 485], 'respectively.': [97, 237, 346, 486, 823, 4116, 4257, 4307], 'The': [98, 238, 347, 487, 770, 833, 895, 960, 1236, 1587, 1603, 1633, 1957, 2011, 2034, 2148, 2349, 2390, 2447, 2601, 3090, 3238, 3259, 3274, 3983, 4117, 4236, 4258, 4308], 'hydroxyl': [99, 188, 348, 437, 887], 'groups': [100, 349, 866], 'radicals': [104, 353], 'would': [105, 354], 'migrates': [106, 355, 1532], 'C(2)': [108, 155, 205, 357, 404, 454, 841, 978, 1173, 1465, 3445, 4018], 'C(1)': [110, 359, 843, 951, 1153, 3974, 3998, 4195, 4280, 4330], 'by': [111, 171, 190, 219, 360, 420, 439, 468, 778, 791, 856, 966, 1249, 2223, 2234, 2269, 2285, 2496, 3353, 3451, 3938, 4129], 'suprafacial': [113, 362], 'shift,': [114, 363], 'resulting': [115, 364, 851, 2448], 'stereochemical': [118, 242, 367, 491, 2171], 'inversion': [119, 200, 368, 449, 973], 'at': [120, 204, 369, 453, 697, 977, 2014, 2502, 2595, 2691, 2763, 3625, 3649, 3893], 'C(1).': [121, 370], 'This': [122, 371, 720, 824, 1047, 1484, 1620, 3716], 'causes': [123, 372], '60°': [124, 373], 'clockwise': [125, 374], '70°': [127, 376], 'counterclockwise': [128, 377], 'rotations': [129, 378, 3452], 'C(1)–C(2)': [132, 381, 3884], 'bond': [133, 382, 1568, 3328, 3331], 'respectively,': [139, 388, 956, 1472, 3979], 'if': [140, 389], 'viewed': [141, 390, 3541, 3553, 3565, 3577], 'K+.': [143, 392], 'A': [144, 393, 2694, 3472, 4096], 'modeling': [145, 394, 3124, 3269, 4131], 'study': [146, 395, 3125, 3270], '1,1-gem-diol': [148, 213, 397, 462, 827, 2153, 3346, 3376, 3395, 3412, 3448, 3464, 3534, 3539, 3551, 3563, 3575], 'intermediates': [149, 214, 398, 463, 880, 2154, 3347], 'indicated': [150, 399, 825, 1048, 2885], 'that': [151, 182, 221, 400, 431, 470, 630, 738, 812, 826, 943, 1049, 1137, 1550, 2811, 2886, 2896, 3149, 3157, 3202, 3224, 3254, 3382, 3416, 3421, 3746, 3755, 3760, 3815, 3865, 3888, 3925, 3966, 4160, 4173, 4189, 4204, 4270], 'new': [152, 401, 3104], 'center': [154, 403, 870, 3423], 'becomes': [156, 405], 'close': [157, 406], 'methyl': [160, 409], 'group': [161, 189, 410, 438, 839, 888, 963, 1463, 1548, 2207, 3279, 3293, 3443, 3529, 4169], '5′-deoxyadenosine.': [163, 412, 1602, 1619], 'Thus,': [164, 413, 4264, 4314], 'hydrogen': [166, 192, 415, 441, 896, 948, 968, 1059, 1145, 1150, 1170, 1468, 1530, 1592, 1615, 2199, 3354, 3971, 3990, 3995, 4015, 4277, 4327], 'back-abstraction': [167, 416], '(recombination)': [168, 417], '5′-deoxyadenosine': [170, 195, 419, 444], 'product': [173, 422, 1609, 1627, 4021], 'structurally': [176, 425], 'feasible.': [177, 426], 'It': [178, 427, 788, 3752, 3811], 'was': [179, 428, 789, 1178, 1247, 1382, 2018, 2214, 2221, 2241, 2278, 2360, 2369, 2392, 2439, 2451, 2606, 2680, 2689, 2989, 3027, 3118, 3348, 3402, 3742, 3918, 4127, 4170, 4182], 'also': [180, 216, 429, 465, 4317], 'predictable': [181, 430], 'substitution': [184, 433], 'migrating': [187, 436, 961], 'atom': [193, 442, 897, 903, 969, 1151, 1469, 1531, 1536, 1544, 1593, 1616, 2888, 3996, 4278, 4328], 'takes': [196, 445], 'place': [197, 446], 'configuration': [203, 452, 976, 3659], 'substrate.': [208, 457, 2033], 'Stereospecific': [209, 458], 'dehydration': [210, 231, 459, 480, 848, 3532], 'can': [215, 464], 'be': [217, 466, 893, 1181, 3813], 'rationalized': [218, 467], 'assuming': [220, 469], 'Asp-α335': [222, 471, 3857, 3891], 'Glu-α170': [224, 473, 3847, 3889], 'function': [225, 474, 3900], 'as': [226, 475, 692, 767, 784, 830, 1025, 1142, 1489, 2203, 2205, 2387, 2910, 3404, 3675, 3879, 3987, 4133, 4222, 4338], 'base': [227, 476], 'catalysts': [228, 477], 'structure-based': [239, 488, 2035], 'mechanism': [240, 489, 1378, 1492, 2036, 2124], 'courses': [243, 492, 2172], 'reaction': [246, 495, 776, 2038, 2126, 2177], 'proposed.': [248, 497], 'Enzymes': [498], 'generally': [500], 'their': [503, 1644, 2145, 3883], 'substrates.': [504, 769], 'Adenosylcobalamin': [505], '(AdoCbl)': [506], '1The': [507], 'abbreviations': [508], 'used': [509, 691, 1024, 2257, 2632, 2796, 3119, 3264], 'are:': [510], 'AdoCbl,': [511], 'adenosylcobalamin': [512], 'coenzyme': [514, 1161, 4006, 4167], 'B12;': [515], 'CN-Cbl,': [516], 'cyanocobalamin;': [517], 'LDAO,': [518, 2467], 'lauryldimethylamine': [519], 'oxide;': [520], 'PEG,': [521], 'polyethylene': [522], 'glycol.': [523], '(coenzyme': [524], 'B12)-dependent': [525], '(1Lee': [528], 'Jr.,': [529, 671, 1259], 'H.A.': [530, 1260], 'Abeles': [531, 640, 911, 924, 933, 985, 1061, 1068, 1084, 1102, 1120, 1188, 1206, 1280, 1296, 1338, 1395, 3947, 3956, 4026, 4042, 4060, 4078], 'R.H.': [532, 641, 912, 934, 986, 1069, 1085, 1103, 1121, 1189, 1207, 1221, 1257, 1281, 1297, 1339, 1396, 1407, 1421, 3957, 4027, 4043, 4061, 4079], 'J.': [533, 642, 796, 800, 913, 935, 987, 995, 1070, 1086, 1124, 1190, 1208, 1224, 1277, 1282, 1300, 1320, 1359, 1684, 1744, 1767, 1785, 1811, 1839, 1858, 1885, 1911, 1939, 1986, 2048, 2076, 2093, 2310, 2528, 2554, 2738, 2771, 2925, 2951, 3303, 3495, 3496, 3691, 3779, 3797, 3958, 4028, 4044, 4082, 4137], 'Biol.': [534, 643, 914, 936, 988, 1071, 1087, 1191, 1225, 1283, 1321, 1749, 2311, 2575, 2848, 3514, 3959, 4029, 4045], 'Chem.': [535, 644, 915, 937, 989, 1072, 1088, 1126, 1192, 1210, 1226, 1284, 1302, 1322, 1361, 1411, 2312, 3960, 4030, 4046, 4084], '1963;': [536], '238:': [537], '2367-2373Abstract': [538], 'Full': [539, 919, 1076, 1092, 1196, 1230, 1288, 1326, 1671, 1673, 1699, 1701, 1727, 1729, 1826, 1828, 1871, 1873, 1900, 1902, 1924, 1926, 2001, 2003, 2063, 2065, 2106, 2108, 2316, 2318, 2543, 2545, 2753, 2755, 2940, 2942, 2964, 2966, 3316, 3318, 3706, 3708, 4034, 4050, 4150, 4152], 'Text': [540, 920, 1077, 1093, 1197, 1231, 1289, 1327, 1672, 1674, 1700, 1702, 1728, 1730, 1827, 1829, 1872, 1874, 1901, 1903, 1925, 1927, 2002, 2004, 2064, 2066, 2107, 2109, 2317, 2319, 2544, 2546, 2754, 2756, 2941, 2943, 2965, 2967, 3317, 3319, 3707, 3709, 4035, 4051, 4151, 4153], 'PDF': [541, 921, 1078, 1094, 1198, 1232, 1290, 1328, 1675, 1703, 1731, 1830, 1875, 1904, 1928, 2005, 2067, 2110, 2320, 2547, 2757, 2944, 2968, 3320, 3710, 4036, 4052, 4154], 'PubMed': [542, 560, 663, 681, 715, 807, 1004, 1079, 1095, 1111, 1131, 1199, 1215, 1233, 1269, 1291, 1307, 1329, 1344, 1366, 1401, 1676, 1704, 1732, 1753, 1790, 1831, 1850, 1876, 1905, 1929, 1950, 2006, 2068, 2087, 2111, 2321, 2344, 2548, 2580, 2723, 2758, 2782, 2853, 2945, 2969, 3321, 3519, 3711, 3802, 3910, 4037, 4053, 4069, 4089, 4155], 'Google': [543, 563, 666, 684, 718, 810, 922, 1007, 1080, 1096, 1114, 1134, 1200, 1218, 1234, 1272, 1292, 1310, 1330, 1347, 1369, 1404, 1418, 1679, 1707, 1735, 1756, 1793, 1834, 1853, 1879, 1908, 1932, 1953, 2009, 2071, 2090, 2114, 2324, 2347, 2551, 2583, 2726, 2761, 2785, 2856, 2948, 2972, 3324, 3502, 3522, 3714, 3805, 3913, 4038, 4054, 4072, 4092, 4158], 'Scholar,': [544, 648, 667, 993, 1081, 1097, 1115, 1201, 1219, 1273, 1293, 1311, 1331, 1348, 1405, 1419, 1435, 1511, 1680, 1708, 1736, 1757, 1835, 1909, 2072, 2091, 2325, 2552, 2949, 4039, 4055, 4073], '2Toraya': [545], 'T.': [546, 548, 550, 650, 652, 1313, 1333, 1390, 1437, 1686, 1688, 1763, 1783, 1813, 1815, 1845, 1864, 1887, 1889, 1917, 1945, 1988, 1990, 2050, 2052, 2082, 2099, 2295, 2297, 2307, 2309, 2327, 2329, 2337, 2530, 2532, 2556, 2558, 2560, 2740, 2742, 2777, 2927, 2929, 2957, 3309, 3693, 3695, 3775, 3795, 3902, 4143], 'Shirakashi': [547], 'Kosuga': [549], 'Fukui': [551, 655, 1316, 1438], 'S.': [552, 654, 656, 1317, 1439, 1658, 2335], 'Biochem.': [553, 658, 708, 1104, 1786, 2339, 3798, 4062], 'Biophys.': [554, 659, 709, 1105, 2340, 4063], 'Res.': [555, 710, 1106, 1412, 4064], 'Commun.': [556, 711, 1107, 4065], '1976;': [557, 1413], '69:': [558], '475-481Crossref': [559], 'Scopus': [561, 664, 682, 716, 808, 1005, 1112, 1132, 1216, 1270, 1308, 1345, 1367, 1402, 1416, 1677, 1705, 1733, 1754, 1791, 1832, 1851, 1877, 1906, 1930, 1951, 2007, 2069, 2088, 2112, 2322, 2345, 2549, 2581, 2724, 2759, 2783, 2854, 2946, 2970, 3322, 3520, 3712, 3803, 3911, 4070, 4090, 4156], '(125)': [562], 'Scholar)': [564, 811, 941, 1135, 1854, 1880, 1933, 1954, 2762, 2786, 2857, 3503, 3964], 'is,': [565, 1557, 3840, 4161], 'however,': [566, 3184], '(S)-1,2-propanediols': [577, 3622, 3868], 'propionaldehyde': [579], '(shown': [580], 'below': [581], 'Reaction': [583, 593], '1,': [584, 1385], 'where': [585], 'R': [586], '=': [587, 731], 'CH3,': [588], 'H,': [589], 'HOCH2).': [590], 'R-CHCH2OH→R-CH2CHO+H2O': [591], '|OH': [592], '1': [594], 'Kinetic': [595], 'measurements': [596], 'provided': [597, 3717], 'some': [598], 'clues': [599], 'solve': [601, 2122], 'enigma': [603], 'apparent': [605], 'lack': [606], 'stereospecificity': [608], 'dehydratase.': [611, 3940], 'When': [612], 'each': [613, 2484, 3236, 3592, 3642], 'enantiomer': [614], '1,2-propanediol': [616, 689, 2012, 2382, 2626, 2921, 3385, 3400, 3418, 3687, 3759], 'run': [618], 'independently,': [619], 'rate': [621, 700], '(R)-isomer': [624, 703], '1.7–1.8': [626], 'times': [627], 'higher': [628, 3200], 'than': [629, 701, 3148, 3201, 3223, 3253, 3381], '(S)-isomer': [633, 695, 2041, 3727, 3749], '(3Zagalak': [634, 927, 979, 3950], 'B.': [635, 928, 980, 1034, 1223, 1423, 1660, 3951], 'Frey': [636, 929, 981, 1204, 3952], 'P.A.': [637, 930, 982, 1065, 1083, 1099, 1117, 1185, 1205, 3953, 4023, 4041, 4057, 4075], 'Karabatsos': [638, 931, 983, 3954], 'G.L.': [639, 932, 984, 2843, 3955], '1966;': [645, 660, 804, 938, 990, 1001, 1089, 1227, 3961, 4047], '24:': [646, 939, 991, 3500, 3962], '3028-3035Google': [647, 940, 992, 3963], '4Yamane': [649], 'Kato': [651], 'Shimizu': [653], 'Arch.': [657, 2338], '113:': [661], '362-366Crossref': [662], '(10)': [665], '5Bachovchin': [668], 'W.W.': [669], 'Eagar': [670], 'R.G.': [672], 'Moore': [673], 'K.W.': [674], 'Richards': [675], 'J.H.': [676], 'Biochemistry.': [677, 1340, 1397, 1846, 1946, 2083, 2778], '1977;': [678, 1323], '16:': [679], '1082-1092Crossref': [680], '(99)': [683, 1217], 'Scholar).': [685, 719, 923, 1008, 1046, 1235, 1370, 1451, 1794, 2010, 2115, 2348, 2584, 2727, 2870, 2973, 3325, 3715, 3914, 4093], 'However,': [686, 873, 1009], 'when': [687, 1010], 'racemic': [688, 1027, 2032, 2381, 2641, 2920, 3686], 'substrate,': [693, 1596], 'reacts': [696], 'faster': [699], '(6Jensen': [704], 'F.R.': [705], 'Neese': [706], 'R.A.': [707], '1975;': [712], '62:': [713], '816-821Crossref': [714], '(9)': [717], 'reversal': [721], 'because': [723, 3137], 'ratio': [726], 'Km': [728], 'values': [729, 3046, 3062, 3074, 3091], '(Km(R)/Km(S)': [730], '3.1–3.2).': [732], 'These': [733, 4334], 'lines': [734, 1373, 3426], 'evidence': [736], 'suggested': [737], 'enzyme': [747, 763, 2350, 4217], 'two': [749, 864], 'different': [750, 753, 3744], 'modes': [751], 'catalytic': [754, 3899], 'efficiency': [755], 'binding': [757, 1573, 2908], 'affinity.': [758], 'In': [759, 1452, 2643, 3154, 3178, 3733, 4284], 'other': [760, 2249, 2619, 3643], 'words,': [761], 'recognizes': [764], 'enantiomers': [766], '"different"': [768], 'stereochemistry': [771], 'established': [777, 1383], 'labeling': [780], 'experiments': [781], 'summarized': [783], 'follows': [785], '(Fig.': [786, 1384, 3750], '1A).': [787], 'shown': [790, 3036, 3654], 'Rétey': [792], 'et': [793, 4346], 'al.': [794, 4347], '(7Rétey': [795], 'Umani-Ronchi': [797, 996], 'A.': [798, 997, 1654, 1769, 3781], 'Seibl': [799], 'Arigoni': [801, 998], 'D.': [802, 999, 1032, 1409, 1441, 1501], 'Experientia.': [803, 1000], '22:': [805, 1002], '502-503Crossref': [806], '(112)': [809], '[18O]-': [813], 'unlabeled': [815], 'propionaldehydes': [816], 'formed': [818, 829], '[1-18O]-(S)-': [820], '[1-18O]-(R)-1,2-propanediols,': [822], 'an': [831, 837, 971, 1143, 1182, 1241, 1541, 3807, 3988], 'intermediate.': [832, 1483], 'initial': [834, 2979], 'migration': [835], 'OH': [838, 865, 962, 1462, 2206, 3528], 'stereoselective,': [845], 'gem-diol': [852, 879, 1482], 'undergoes': [853, 889], 'steric': [854], 'control': [855], 'only': [860], 'one': [861, 1534], 'on': [867, 950, 1464, 1470, 2161, 3294, 3335, 3398, 3415, 3973, 4172], 'prochiral': [869], 'being': [871], 'eliminated.': [872], 'absolute': [875], 'configurations': [876], 'why': [882, 2188], 'how': [884], 'specific': [886], 'elimination': [890, 3525], 'remained': [891], 'elucidated.': [894], 'moves': [898, 1551], 'adjacent': [901, 1542], 'carbon': [902, 1535, 1543], 'without': [904, 1935, 2258], 'exchange': [905, 1546], 'solvent': [907], 'protons': [908], '(8Brownstein': [909], 'A.M.': [910], '1961;': [916], '236:': [917], '1199-1200Abstract': [918], 'co-workers': [926, 1063, 3949], 'demonstrated': [942, 1136, 1248, 3965], 'atoms': [949, 3972], '(S)-': [953], '(R)-1,2-propanediols,': [955], 'migrate': [957, 3980], 'C(2).': [959, 3982], 'replaced': [965], 'accompanying': [972], '9Rétey': [994], '72-73Crossref': [1003], '(84)': [1006], 'enantiomeric': [1012, 2156], 'pair': [1013, 1969], 'ethylene': [1015, 2616], 'glycols': [1016], 'labeled': [1017], 'stereospecifically': [1018], 'deuterium': [1020], 'tritium': [1022], 'substrates,': [1026], 'products': [1028, 2255], 'obtained': [1030, 4128], '(10Arigoni': [1031], 'Zagalak': [1033, 1222, 1422, 4345], 'Friedrich': [1035, 1424], 'W.': [1036, 1425, 1720, 2717], 'Vitamin': [1037, 1426], 'B12.': [1038, 1427, 1442, 1502, 1518], 'Walter': [1039, 1428], 'de': [1040, 1429], 'Gruyter': [1041, 1430], '&': [1042, 1431, 1445, 1506, 1521], 'Co.,': [1043, 1432], 'Berlin1979:': [1044, 1433], '389-410Google': [1045], 'rapid': [1050], 'internal': [1051], 'rotation': [1052], 'intermediate': [1055, 1144, 1183, 1244, 3377, 3396, 3413, 3449, 3540, 3552, 3564, 3576, 3989], 'occurs': [1056], 'before': [1057], 'recombination.': [1060], '(11Frey': [1064, 1184, 4022], 'Essenberg': [1066, 1118, 1186, 4024, 4076], 'M.K.': [1067, 1119, 1187, 1203, 4025, 4077], '1967;': [1073, 1108, 1193, 4031, 4066], '242:': [1074, 1194, 4032], '5369-5377Abstract': [1075, 1195, 4033], '12Frey': [1082, 4040], '241:': [1090, 1228, 4048], '2732-2777Abstract': [1091, 4049], '13Frey': [1098, 4056], 'Kerwar': [1100, 1122, 4058, 4080], 'S.S.': [1101, 1123, 4059, 4081], '29:': [1109, 4067], '873-879Crossref': [1110, 4068], '(25)': [1113, 4071], '14Frey': [1116, 4074], 'Am.': [1125, 1209, 1301, 1360, 4083], 'Soc.': [1127, 1211, 1303, 1362, 4085], '1970;': [1128, 4086], '92:': [1129, 4087], '4488-4489Crossref': [1130, 4088], '(20)': [1133, 4091], 'enzyme-bound': [1139, 2152, 3984, 4176], 'AdoCbl': [1140, 2240, 3985], 'serves': [1141, 3986], 'carrier,': [1146, 3991], 'first': [1147, 2799, 3111, 3143, 3169, 3194, 3215, 3257, 3992], 'accepting': [1148, 3993], 'C(5′)': [1158, 3439, 4003, 4190, 4239, 4289], 'then,': [1163, 4008], 'subsequent': [1166, 4011], 'step,': [1167, 4012], 'giving': [1168, 4013], 'back': [1171, 1617, 4016], 'product.': [1176], '5′-Deoxyadenosine': [1177], 'postulated': [1179], '15Essenberg': [1202], '1971;': [1212], '93:': [1213], '1242-1251Crossref': [1214], '16Abeles': [1220], '1245-1246Abstract': [1229], 'formation': [1237, 1624], 'cob(II)alamin': [1239], 'organic': [1242], 'during': [1245], 'catalysis': [1246], 'optical': [1250], 'electron': [1252, 2875, 3244, 3669, 3730, 3736], 'paramagnetic': [1253], 'resonance': [1254], 'spectroscopies': [1255], '(17Abeles': [1256], 'Lee': [1258], 'Ann.': [1261], 'N.': [1262, 1682, 1694, 1777, 1781, 1809, 1821, 1837, 1843, 1860, 1866, 1883, 1895, 1913, 1919, 1937, 1943, 1984, 1996, 2046, 2058, 2074, 2080, 2095, 2101, 2333, 2526, 2538, 2570, 2736, 2748, 2769, 2775, 2923, 2935, 2953, 2959, 3305, 3311, 3689, 3701, 3789, 3793, 4139, 4145], 'Y.': [1263, 1692, 1771, 1779, 1819, 1841, 1862, 1893, 1915, 1941, 1994, 2056, 2078, 2097, 2301, 2303, 2331, 2536, 2566, 2568, 2746, 2773, 2933, 2955, 3307, 3699, 3783, 3791, 4141], 'Acad.': [1264], 'Sci.': [1265, 3906], '1964;': [1266], '112:': [1267], '695-702Crossref': [1268], '(21)': [1271], '18Finlay': [1274], 'T.H.': [1275], 'Valinsky': [1276], 'Mildvan': [1278, 1336, 1393], 'A.S.': [1279, 1337, 1394], '1973;': [1285], '248:': [1286], '1285-1290Abstract': [1287], '19Valinsky': [1294], 'J.E.': [1295], 'Fee': [1298], 'J.A.': [1299], '1974;': [1304], '96:': [1305], '4709-4710Crossref': [1306], '(58)': [1309], '20Toraya': [1312], 'Ushio': [1314], 'K.': [1315, 1690, 1712, 1773, 1775, 1817, 1891, 1992, 2054, 2534, 2562, 2693, 2744, 2931, 3697, 3785, 3787], 'Hogenkamp': [1318], 'H.P.C.': [1319], '252:': [1324], '963-970Abstract': [1325], '21Toraya': [1332], 'Krodel': [1334, 1391], 'E.': [1335, 1392], '1979;': [1341, 1398], '18:': [1342, 1399], '417-426Crossref': [1343, 1400], '(118)': [1346, 1403], '22Cockle': [1349], 'S.A.': [1350], 'Hill': [1351], 'H.A.O.': [1352], 'Williams': [1353], 'R.J.P.': [1354], 'Davies': [1355], 'S.P.': [1356], 'Foster': [1357], 'M.A.': [1358], '1972;': [1363], '94:': [1364], '275-277Crossref': [1365], '(88)': [1368], 'these': [1372, 3482], 'evidence,': [1375], 'minimal': [1377], 'B': [1386, 3474, 4098], 'C)': [1388], '(21Toraya': [1389], '23Abeles': [1406], 'Dolphin': [1408, 1440], 'Acc.': [1410], '9:': [1414, 1751], '114-120Crossref': [1415], '(238)': [1417], '24Abeles': [1420], '373-388Google': [1434], '25Toraya': [1436], 'John': [1443, 1504, 1519], 'Wiley': [1444, 1505, 1520], 'Sons,': [1446, 1507, 1522], 'Inc.,': [1447, 1508, 1523], 'New': [1448, 1509, 1524], 'York1982:': [1449], '233-262Google': [1450], 'reaction,': [1456], 'X': [1457, 1549], 'H': [1459], 'C(1),': [1471], 'water': [1475], 'molecule': [1476, 2810, 2983, 3191, 3378, 3386, 3397, 3401, 3414, 3419, 3450, 3465], 'subsequently': [1478], 'eliminated': [1479], 'has': [1485, 2042], 'now': [1486], 'been': [1487, 1640, 2043, 2631, 2813], 'accepted': [1488], 'general': [1491], 'all': [1494, 3003], 'AdoCbl-dependent': [1496, 1637, 3809], 'intramolecular': [1497], 'group-transfer': [1498], 'reactions': [1499], '(26Dolphin': [1500], '2.': [1503], 'York1982Google': [1510], '27Banerjee': [1512], 'R.': [1513, 1710], 'Chemistry': [1514], 'Biochemistry': [1516], 'York1999Google': [1525], 'Scholar),': [1526, 3806], 'which': [1528, 1611, 2629], 'opposite': [1554, 3877], 'direction.': [1555], 'That': [1556, 3839], 'enzyme-coenzyme': [1559], 'interaction': [1560], 'leads': [1561, 1621], 'activation': [1564], 'Co–C': [1567, 1579], 'coenzyme.': [1571, 1632], 'Substrate': [1572], 'triggers': [1574], 'homolysis': [1576], 'bond,': [1580], 'forming': [1581], 'cob(II)alamin.': [1586], 'abstracts': [1590, 1613, 4274], 'producing': [1597], 'substrate-derived': [1599], 'rearranges': [1606], 'radical,': [1610], 'then': [1612, 2409], 'regeneration': [1629], 'three-dimensional': [1634, 2146], 'enzymes': [1638], 'have': [1639, 1796], 'solved': [1641], 'understand': [1643], 'fine': [1645], 'mechanisms': [1646], 'action': [1648], '(28Mancia': [1649], 'F.': [1650], 'Keep': [1651], 'N.H.': [1652], 'Nakagawa': [1653], 'Leadlay': [1655], 'P.F.': [1656], 'McSweeney': [1657], 'Rasmussen': [1659], 'Bösecke': [1661], 'P.': [1662], 'Diat': [1663], 'O.': [1664], 'Evans': [1665], 'P.R.': [1666], 'Structure.': [1667, 1695, 1723, 1822, 1867, 1896, 1920, 1997, 2059, 2102, 2539, 2749, 2936, 2960, 3312, 3702, 4146], '1996;': [1668], '4:': [1669], '339-350Abstract': [1670], '(429)': [1678], '29Shibata': [1681], 'Masuda': [1683, 1810, 1838, 1884, 1938, 1985, 2047, 2075, 2527, 2737, 2770, 2924, 3690], 'Tobimatsu': [1685, 1762, 1812, 1886, 1987, 2049, 2529, 2557, 2739, 2926, 3692, 3774], 'Toraya': [1687, 1782, 1814, 1844, 1863, 1888, 1916, 1944, 1989, 2051, 2081, 2098, 2308, 2336, 2531, 2559, 2741, 2776, 2928, 2956, 3308, 3694, 3794, 4142], 'Suto': [1689, 1774, 1816, 1890, 1991, 2053, 2533, 2561, 2743, 2930, 3696, 3786], 'Morimoto': [1691, 1778, 1818, 1840, 1861, 1892, 1914, 1940, 1993, 2055, 2077, 2096, 2535, 2565, 2745, 2772, 2932, 2954, 3306, 3698, 3790, 4140], 'Yasuoka': [1693, 1780, 1820, 1842, 1865, 1894, 1918, 1942, 1995, 2057, 2079, 2100, 2537, 2569, 2747, 2774, 2934, 2958, 3310, 3700, 3792, 4144], '1999;': [1696, 1724, 1823, 1897, 1998, 2060, 2540, 2577, 2750, 2937, 3703], '7:': [1697, 1725, 1824, 1898, 1999, 2061, 2541, 2751, 2938, 3704], '997-1008Abstract': [1698, 1825, 1899, 2000, 2062, 2542, 2752, 2939, 3705], '(217)': [1706, 1833, 1907, 2008, 2070, 2550, 2760, 2947, 3713], '30Reitzer': [1709], 'Gruber': [1711], 'Jogl': [1713], 'G.': [1714, 1740], 'Wagner': [1715], 'U.G.': [1716], 'Bothe': [1717], 'H.': [1718, 1765, 3777], 'Buckel': [1719], 'Kratky': [1721], 'C.': [1722], '891-902Abstract': [1726], '(195)': [1734], '31Sintchak': [1737], 'M.D.': [1738], 'Arjara': [1739], 'Kellogg': [1741], 'B.A.': [1742], 'Stubbe': [1743], 'Drennan': [1745], 'C.L.': [1746], 'Nat.': [1747], 'Struct.': [1748], '2002;': [1750, 1787, 1847, 1947, 2084, 2779, 3799], '293-300Crossref': [1752], '(169)': [1755], '32Yamanishi': [1758], 'M.': [1759, 1761, 2299, 2305, 2564, 3771, 3773], 'Yunoki': [1760, 3772], 'Sato': [1764, 3776], 'Matsui': [1766, 3778], 'Dokiya': [1768, 3780], 'Iuchi': [1770, 3782], 'Oe': [1772, 3784], 'Shibata': [1776, 1859, 1912, 2094, 2563, 2952, 3304, 3788, 4138], 'Eur.': [1784, 3796], '269:': [1788, 3800], '4484-4494Crossref': [1789, 3801], '(96)': [1792, 3804], 'We': [1795, 2183], 'determined': [1797, 3624], 'CN-Cbl': [1807, 2471], '(29Shibata': [1808, 1882, 1983, 2045, 2525, 2735, 2922, 3688], '33Shibata': [1836, 2073], '41:': [1848, 1948, 2085, 2780], '12607-12617Crossref': [1849, 1949, 2086, 2781], '(54)': [1852, 1952, 2089, 2784], 'adeninylpentylcobalamin': [1856], '(34Masuda': [1857, 3302, 4136], '2000;': [1868, 1921, 2103, 2961, 3313, 3907, 4147], '8:': [1869, 1922, 2104, 2962, 3314, 4148], '775-788Abstract': [1870, 1923, 2105, 2963, 3315, 4149], '(128)': [1878, 1931, 2113, 2971, 3323, 4157], '34Masuda': [1910, 2092, 2950], '(33Shibata': [1936, 2768], '1,2-propanediol.': [1956, 2642], 'O(1)': [1958, 3371, 3543, 3555, 3841], 'O(2)': [1960, 3373, 3567, 3579, 3853], 'hydrogen-bonded': [1965, 3843], 'respective': [1968], 'amino': [1971, 3824], 'acid': [1972, 3825], 'residues,': [1973], 'namely': [1974], '(Glu-α170': [1975], 'Gln-α296)': [1977], '(Asp-α335': [1979], 'His-α143),': [1981], 'respectively': [1982, 3630], 'active': [2016, 3651, 3765, 3873, 4104, 4213], 'site': [2017, 3766, 3874, 4214], 'assigned': [2019, 2814], '(S)-isomer,': [2022], 'crystals': [2025, 2635, 2648, 2673], 'were': [2026, 2158, 2251, 2494, 2593, 2649, 2701, 2706, 2795, 2824, 2835, 3490, 3623, 3638, 3672], 'grown': [2027, 2495, 2636], 'presence': [2030, 2138, 2639, 2918, 3618, 3684], 'proposed': [2044], 'confirm': [2117], 'assignment': [2119, 3724], '(R)-isomer,': [2129, 2647], 'crystallized': [2131, 2915, 3615, 3681], 'dehydratase·CN-Cbl': [2134, 3613], '(S)-enantiomers': [2142, 4208], 'structures.': [2147, 3484], 'conformations': [2149], 'substrates': [2157, 3647], 'modeled.': [2159], 'Based': [2160], 'models,': [2167, 2733], 'elucidated': [2169], '(S)-isomers.': [2182, 3391, 4200], 'propose': [2184], 'here': [2185], 'reason': [2187], 'enantiomers,': [2197], 'abstraction': [2200], 'recombination,': [2202], 'well': [2204], 'migration,': [2208], 'proceed': [2209], 'manners.': [2212], 'Materials—(R)-1,2-Propanediol': [2213], 'purchased': [2215], 'TCI,': [2217], 'Tokyo,': [2218, 2228, 2246], 'Japan.': [2219, 2247, 2600], '(S)-1,2-Propanediol': [2220], 'synthesized': [2222], 'reduction': [2224], 'l-lactide': [2226], '(TCI,': [2227], 'Japan)': [2229], 'LiAlH4': [2231], 'purified': [2233, 2284], 'distillation': [2235], 'under': [2236], 'reduced': [2237], 'pressure.': [2238], 'Crystalline': [2239], 'gift': [2243], 'Eizai,': [2245], 'All': [2248, 2703], 'chemicals': [2250], 'reagent': [2252], 'grade': [2253], 'commercial': [2254], 'further': [2259], 'purification.': [2260], 'Purification': [2261], 'Enzyme': [2263], 'Substitution': [2265], 'Racemic': [2267], '1,2-Propanediol': [2268], 'Enantiomeric': [2270], 'Substrates—Diol': [2271], 'ATCC': [2276], '8724': [2277], 'overexpressed': [2279], 'Escherichia': [2281], 'coli': [2282], 'following': [2287], 'modification': [2288], 'method': [2291, 2501], 'described': [2292, 2388, 4134], 'previously': [2293, 4135], '(35Tobimatsu': [2294], 'Hara': [2296], 'Sakaguchi': [2298], 'Kishimoto': [2300], 'Wada': [2302], 'Isoda': [2304], 'Sakai': [2306, 2328], '1995;': [2313], '270:': [2314], '7142-7148Abstract': [2315], '(65)': [2323], '36Tobimatsu': [2326], 'Hashida': [2330], 'Mizoguchi': [2332], 'Miyoshi': [2334], '1997;': [2341, 2720], '347:': [2342], '132-140Crossref': [2343], '(50)': [2346], 'extracted': [2351], 'crude': [2354], 'membrane': [2355], 'fractions': [2356], '1%': [2358, 2384], 'Brij35': [2359], 'loaded': [2361], 'onto': [2362], 'DEAE-cellulose': [2364], 'column,': [2365], 'column': [2368, 2391], 'washed': [2370, 2393], '0.01': [2372, 2396, 2454], 'm': [2373, 2397, 2417, 2455, 2513, 2517], 'potassium': [2374, 2398, 2456], 'phosphate': [2375, 2399, 2457], 'buffer': [2376, 2400, 2414, 2458, 2519], '(pH': [2377, 2401, 2459, 2520], '8.0)': [2378, 2402, 2460], 'containing': [2379, 2403, 2415, 2461, 2508, 2612], '2%': [2380, 2404, 2419, 2462], 'phenylmethanesulfonyl': [2385], 'fluoride,': [2386], 'previously.': [2389], 'again': [2394], 'eluted': [2410], 'same': [2413, 2907, 3432, 3674, 3829], '0.15': [2416], 'KCl,': [2418], '(S)-1,2-propanediol,': [2422, 2465], '20': [2424, 2469], 'mm': [2425, 2445], 'sucrose': [2426], 'monocaprate.': [2427], 'After': [2428, 2871], 'addition': [2429, 2658], 'LDAO': [2431, 2524], 'concentration': [2434, 2669], '0.1%,': [2436], 'apoenzyme': [2438], 'concentrated': [2440], 'incubated': [2442], '4': [2444, 2503], 'CN-Cbl.': [2446, 2476], 'enzyme·CN-Cbl': [2449, 2485, 2492, 2790, 3679], 'complex': [2450, 2493, 3301, 3680], 'dialyzed': [2452], 'against': [2453, 2505], '0.1%': [2466], 'μm': [2470], 'remove': [2473], 'excess': [2474], 'unbound': [2475], 'Crystallization—The': [2477], 'final': [2478, 2668, 3242], 'solution': [2479, 2611], 'contained': [2480], '50–60': [2481], 'mg/ml': [2482], 'complex.': [2486], 'Crystals': [2487], '(S)-1,2-propanediol-bound': [2491, 2604, 2902, 3022, 3163, 3834], 'sandwich-drop': [2498], 'vapor': [2499], 'diffusion': [2500], '°C': [2504], 'reservoir': [2507], '15%': [2509, 2613], '(w/v)': [2510], 'PEG6000,': [2511, 2628], '0.23': [2512], 'ammonium': [2514], 'sulfate,': [2515], '0.02': [2516], 'Tris·HCl': [2518], '8.0),': [2521], '0.2%': [2523], '37Masuda': [2553], 'Yamaguchi': [2555], 'Higuchi': [2567], 'Acta': [2571, 2844, 3510], 'Crystallogr.': [2572, 2576, 2845, 2849, 3498, 3511, 3515], 'Sect.': [2573, 2846, 3512], 'D': [2574, 2847, 3513], '55:': [2578], '907-909Crossref': [2579], '(14)': [2582], 'Data': [2585], 'Collection—For': [2586], 'complexes,': [2588], 'diffraction': [2590, 2704], 'data': [2591, 2700, 2705, 3004], 'sets': [2592], 'collected': [2594], 'BL41XU': [2597], 'beamline,': [2598], 'SPring-8,': [2599], 'form': [2605, 2818, 2903, 3013], 'transferred': [2607, 2681], 'cryoprotectant': [2610, 2653], 'PEG20000,': [2614], '17.5%': [2615], 'glycol,': [2617], 'components': [2620], 'protein': [2623, 2664], 'drop': [2624, 2665], 'except': [2625, 3644], 'had': [2630, 2812], 'case': [2645, 3160, 3180], 'dissolved': [2650], 'several': [2652], 'solutions': [2654], 'available,': [2655], 'but': [2656, 3231], 'PEG400': [2660], 'directly': [2661], '∼20%': [2671], 'kept': [2672], 'intact.': [2674], 'For': [2675], 'forms,': [2677], 'into': [2682], 'cryo-stream': [2684], 'cryo-loop': [2687], 'flash-cooled': [2690], '100': [2692, 2764], 'total': [2695], '180': [2697], '°': [2698], 'measured.': [2702], 'processed': [2707], 'scaled': [2709], 'using': [2710, 3002], 'DENZO': [2711], 'SCALEPACK': [2713], '(38Otwinowski': [2714], 'Z.': [2715], 'Minor': [2716], 'Methods': [2718], 'Enzymol.': [2719], '276:': [2721], '307-326Crossref': [2722], '(38572)': [2725], 'Structure': [2728], 'Determination—Two': [2729], 'kinds': [2730], 'starting': [2732, 2882], 'substrate-bound': [2734, 2817, 2829], 'K': [2765], 'substrate-free': [2767], 'forms': [2787, 3835, 4111], 'complex,': [2791, 4115], 'structure': [2793], 'determination': [2794], 'refinement': [2800], 'step': [2801], 'cross-check': [2803], 'influence': [2804], 'model': [2806, 2833, 2988, 3289], 'bias': [2807], 'so': [2819, 3135, 3420, 4188], 'far.': [2820], 'Coordinates': [2821], 'deleted': [2825], 'original': [2828, 3337], 'structure.': [2830], 'Refinement': [2831, 3033], 'building': [2834], 'carried': [2836], 'out': [2837], 'CNS': [2839], '(39Brünger': [2840], 'A.T.': [2841], 'Warren': [2842], '1998;': [2850], '54:': [2851], '905-921Crossref': [2852], '(16967)': [2855], 'XFIT': [2859], '(40McRee': [2860], 'D.E.': [2861], 'Practical': [2862], 'Protein': [2863], 'Crystallography.': [2864], 'Academic': [2865], 'Press,': [2866], 'San': [2867], 'Diego,': [2868], 'CA1993Google': [2869], 'rigid-body': [2872], 'refinement,': [2873, 2997, 3001], '2mFo–DFc': [2874, 3243], 'density': [2876, 3245, 3670, 3731, 3737], 'maps': [2877], '(R)-1,2-propanediol': [2879, 2890, 3190, 4250], 'models': [2883], 'clearly': [2884, 2904], 'C(3)': [2887], 'shares': [2891], 'similar': [2893], 'As': [2899, 3361, 3653], 'expected,': [2900], 'displayed': [2905], 'mode': [2909, 4221], 'observed': [2911], 'Thus': [2974], 'could': [2976, 4191], 'assign': [2977], 'coordinates': [2980, 3275], 'forms.': [2986], 'Each': [2987], 'built': [2990], 'rounds': [2992], 'manual': [2994], 'rebuilding,': [2995], 'positional': [2996], 'individual': [2999], 'B-factor': [3000, 3140, 3187, 3212], '30': [3006, 3016], '2.3': [3008], 'Å': [3009, 3019], '(R)-1,2-propanediol-bound': [3012, 3031], '1.8': [3018], 'form.': [3023, 3032], 'Non-crystallographic': [3024], 'symmetry': [3025, 3931], 'restraint': [3026], 'applied': [3028], 'statistics': [3034], 'Table': [3038], 'I.Table': [3039], 'ICrystallographic': [3040], 'statistics(R)-Isomer-bound(S)-Isomer-boundData': [3041], 'collectionWavelength': [3042], '(Å)0.7080.708Resolution': [3043], 'range': [3044, 3085], '(Å)aThe': [3045], 'parentheses': [3048, 3064, 3076, 3093], 'highest': [3052, 3068, 3080, 3097], 'resolution': [3053, 3069, 3081, 3098], 'shell.30-2.30': [3054], '(2.38-2.30)30-1.80': [3055], '(1.86-1.80)Space': [3056], 'groupP212121P212121Unit': [3057], 'cell': [3058], '(Å)a74.6473.83b122.27121.95c207.43208.24Measured': [3059], 'reflections1,033,4831,991,323Unique': [3060], 'reflections79,408152,278RmergeaThe': [3061], 'shell.0.095': [3070], '(0.413)0.055': [3071], '(0.119)Completeness': [3072], '(%)aThe': [3073], 'shell.93.1': [3082], '(80.8)87.3': [3083], '(67.1)RefinementResolution': [3084], '(Å)30-2.3030-1.80Rwork/Rfree0.208/0.2550.195/0.230Total': [3086], 'number': [3087], 'atoms14,22514,908a': [3089], 'shell.': [3099], 'Open': [3100], 'table': [3101], 'tab': [3105], 'Geometry': [3106], 'Calculation': [3107], 'Modeling': [3109, 3344], 'Study—The': [3110], 'αβγ': [3112, 3216], 'unit': [3113, 3144, 3170, 3195, 3206, 3217, 3228], '(αβγ)2': [3116], 'heterohexamer': [3117], 'geometry': [3121, 3266], 'calculation': [3122, 3267], 'vicinity': [3129], 'published': [3134], 'far,': [3136], 'average': [3139, 3186], 'much': [3146], 'lower': [3147, 3222], 'second': [3152, 3176, 3205, 3227, 3249, 3260], 'unit.': [3153, 3177], 'paper,': [3156], 'form,': [3164, 3183], '23.1': [3165], 'Å2': [3166, 3173], '36.0': [3172], '(R)-isomer-bound': [3182], '(25.8': [3196], 'Å2)': [3197, 3219], 'slightly': [3199, 3221], '(23.5': [3207], 'Å2),': [3208, 3230], 'overall': [3211], '(37.6': [3218], '(39.4': [3229], 'they': [3232], 'comparable': [3234], 'other.': [3237], 'part': [3239], 'map': [3246, 3671], 'covering': [3247], 'clearer': [3252], 'molecule.': [3258], 'unit,': [3261], 'therefore,': [3262], 'paper.': [3273], 'conformation': [3283, 3662, 4126], 'derived': [3285], 'superimposed': [3288, 4171], 'adenine': [3296, 4163], 'ring': [3297], 'enzyme·adeninylpentylcobalamin': [3300], 'Libraries': [3326], 'length': [3329], 'angle': [3332, 4259, 4309], 'based': [3334], 'topology': [3338], 'parameter': [3340], 'files': [3341], 'CNS.': [3343, 3360], 'performed': [3349, 3403], 'XFIT,': [3351], 'followed': [3352], 'generation': [3355], 'energy': [3357, 3366], 'minimization': [3358], 'result': [3363], 'minimization,': [3367], 'distance': [3369, 3437], 'shorter': [3380], 'Fitting': [3392], 'follows:': [3405], '(i)': [3406], 'overlap': [3407], 'O(1)–O(2)': [3409, 3468], 'line': [3410], 'molecules': [3429], 'share': [3430, 3896], 'position;': [3433], '(ii)': [3434], 'minimize': [3435], 'ribose': [3455, 4180], 'moiety': [3456, 4164, 4181], 'around': [3457, 3466, 4184], 'glycosidic': [3459, 4186], 'linkage': [3460, 4187], 'line.': [3469], 'Fig.': [3470, 3476, 3656, 4094, 4201], '5,': [3471], '6,': [3477], 'A–D': [3478], 'generated': [3480], 'Unless': [3485], 'otherwise': [3486], 'indicated,': [3487], 'structural': [3488], 'figures': [3489], 'created': [3491], 'MOLSCRIPT': [3493], '(41Kraulis': [3494], 'Appl.': [3497], '1991;': [3499], '946Crossref': [3501], 'RASTER3D': [3505], '(42Merritt': [3506], 'E.A.': [3507], 'Murphy': [3508], 'M.E.P.': [3509], '1994;': [3516], '50:': [3517], '869-873Crossref': [3518], '(2857)': [3521], 'Scholar).Fig.': [3523], '6Stereospecific': [3524], 'intermediates.': [3535], 'A,': [3536], '(R)-isomer-derived': [3538, 3562], 'along': [3544, 3556, 3568, 3580], 'O(1)–C(1)': [3546, 3558], 'bond.': [3547, 3559, 3571, 3583], 'B,': [3548], '(S)-isomer-derived': [3550, 3574], 'C,': [3560], 'O(2)–C(1)': [3570, 3582], 'D,': [3572], 'Schematic': [3584], 'drawings': [3585], 'given': [3587], 'right': [3590], 'figure.View': [3593], 'Large': [3594], 'Image': [3595], 'Figure': [3596], 'ViewerDownload': [3597], '(PPT)': [3598], 'Modes': [3599], 'Binding': [3601], '(S)-1,2-Propanediols': [3605], 'Diol': [3607], 'Dehydratase—The': [3608], 'x-ray': [3609], '2.3-': [3626], '1.8-Å': [3628], 'resolutions,': [3629], '(Table': [3631], 'I).': [3632], 'Overall': [3633], 'essentially': [3639], 'identical': [3640], 'site.': [3652], '2B,': [3657], 'fitted': [3666], 'those': [3676], 'definite': [3719], 'proof': [3720], 'our': [3722], 'previous': [3723], 'map.': [3732], 'contrast,': [3734, 4285], 'contoured': [3738], '(R)-enantiomer': [3741], 'quite': [3743, 4318], '2A).': [3751], 'rather': [3753], 'resembles': [3754], 'corresponding': [3756], 'glycerol': [3768], '(32Yamanishi': [3770], 'isofunctional': [3808], 'enzyme.': [3810, 3838], 'should': [3812], 'noted': [3814], '-COO–': [3845, 3855], 'Nϵ2': [3849, 3859], 'Gln-α296': [3851], 'His-α143.': [3861], 'Previously,': [3862], 'assumed': [3864], 'orientation': [3878], 'mirror': [3880, 4224], 'images': [3881], 'bonds': [3885], 'aligned': [3886], 'might': [3892], 'least': [3894], 'partially': [3895], 'common': [3898], '(43Toraya': [3901], 'Cell.': [3903], 'Mol.': [3904], 'Life': [3905], '57:': [3908], '106-127Crossref': [3909], '(145)': [3912], 'Although': [3915], 'pseudo-symmetry': [3917], 'case,': [3921], 'became': [3923], 'evident': [3924], 'there': [3926], 'another': [3928], 'plane': [3929, 4230], 'relating': [3932], '(S)-substrates': [3936], 'Stereospecificity': [3941], 'Hydrogen': [3943], 'Abstraction': [3944], 'Substrates—': [3946], '(S)-1,2-propanediols,': [3978], '3,': [4095], 'shows': [4099, 4203], 'sites': [4105], '(S)-isomer-bound': [4110], 'enzyme·cobalamin': [4114], 'distal': [4125], 'study,': [4132], 'Scholar);': [4159], 'adeninylpentylcobalamin,': [4177], 'rotated': [4183], 'come': [4192], 'closest': [4193], '3C': [4202], 'image': [4225], 'respect': [4227], 'including': [4231], 'K+,': [4232], 'O(1),': [4233], 'O(2).': [4235], 'distances': [4237, 4287], 'C(1)-HR,': [4245, 4295], 'C(1)-HS,': [4246, 4296], 'C(2)-H': [4248, 4298], '1.45,': [4252], '2.53,': [4253], '3.73': [4255], 'Å,': [4256, 4306], 'C(4′)–C(5′)–C(1)HR': [4261], '137.6°.': [4263], 'predict': [4269], '(R)-isomer.': [4283], '2.55,': [4302], '1.46,': [4303], '3.59': [4305], 'C(4′)–C(5′)–C(1)HS': [4311], '128.5°.': [4313], '(S)-isomer.': [4333], 'predictions': [4335], 'just': [4337], 'expected': [4339], 'experimental': [4342], 'results': [4343]}, 'cited_by_api_url': 'https://api.openalex.org/works?filter=cites:W1983311793', 'counts_by_year': [{'year': 2024, 'cited_by_count': 1}, {'year': 2023, 'cited_by_count': 1}, {'year': 2022, 'cited_by_count': 1}, {'year': 2021, 'cited_by_count': 1}, {'year': 2019, 'cited_by_count': 3}, {'year': 2018, 'cited_by_count': 2}, {'year': 2017, 'cited_by_count': 1}, {'year': 2016, 'cited_by_count': 2}, {'year': 2015, 'cited_by_count': 4}, {'year': 2014, 'cited_by_count': 2}, {'year': 2013, 'cited_by_count': 3}, {'year': 2012, 'cited_by_count': 4}], 'updated_date': '2024-12-24T15:55:21.197296', 'created_date': '2016-06-24'}
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