Publication Information

{'id': 'https://openalex.org/W1975122118', 'doi': 'https://doi.org/10.1016/s0006-3495(03)74640-2', 'title': 'ASTRO-FOLD: A Combinatorial and Global Optimization Framework for Ab Initio Prediction of Three-Dimensional Structures of Proteins from the Amino Acid Sequence', 'display_name': 'ASTRO-FOLD: A Combinatorial and Global Optimization Framework for Ab Initio Prediction of Three-Dimensional Structures of Proteins from the Amino Acid Sequence', 'publication_year': 2003, 'publication_date': '2003-10-01', 'ids': {'openalex': 'https://openalex.org/W1975122118', 'doi': 'https://doi.org/10.1016/s0006-3495(03)74640-2', 'mag': '1975122118', 'pmid': 'https://pubmed.ncbi.nlm.nih.gov/14507680', 'pmcid': 'https://www.ncbi.nlm.nih.gov/pmc/articles/1303441'}, 'language': 'en', 'primary_location': {'is_oa': True, 'landing_page_url': 'https://doi.org/10.1016/s0006-3495(03)74640-2', 'pdf_url': 'https://www.cell.com/article/S0006349503746402/pdf', 'source': {'id': 'https://openalex.org/S98085912', 'display_name': 'Biophysical Journal', 'issn_l': '0006-3495', 'issn': ['0006-3495', '1542-0086'], 'is_oa': False, 'is_in_doaj': False, 'is_core': True, 'host_organization': 'https://openalex.org/P4310320990', 'host_organization_name': 'Elsevier BV', 'host_organization_lineage': ['https://openalex.org/P4310320990'], 'host_organization_lineage_names': ['Elsevier BV'], 'type': 'journal'}, 'license': 'publisher-specific-oa', 'license_id': 'https://openalex.org/licenses/publisher-specific-oa', 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, 'type': 'article', 'type_crossref': 'journal-article', 'indexed_in': ['crossref', 'pubmed'], 'open_access': {'is_oa': True, 'oa_status': 'bronze', 'oa_url': 'https://www.cell.com/article/S0006349503746402/pdf', 'any_repository_has_fulltext': True}, 'authorships': [{'author_position': 'first', 'author': {'id': 'https://openalex.org/A5000327032', 'display_name': 'John L. Klepeis', 'orcid': 'https://orcid.org/0000-0001-5180-3696'}, 'institutions': [{'id': 'https://openalex.org/I20089843', 'display_name': 'Princeton University', 'ror': 'https://ror.org/00hx57361', 'country_code': 'US', 'type': 'education', 'lineage': ['https://openalex.org/I20089843']}], 'countries': ['US'], 'is_corresponding': False, 'raw_author_name': 'J.L. Klepeis', 'raw_affiliation_strings': ['Department of Chemical Engineering, Princeton University, Princeton, New Jersey 10036, USA.'], 'affiliations': [{'raw_affiliation_string': 'Department of Chemical Engineering, Princeton University, Princeton, New Jersey 10036, USA.', 'institution_ids': ['https://openalex.org/I20089843']}]}, {'author_position': 'last', 'author': {'id': 'https://openalex.org/A5050187529', 'display_name': 'Christodoulos A. Floudas', 'orcid': None}, 'institutions': [{'id': 'https://openalex.org/I20089843', 'display_name': 'Princeton University', 'ror': 'https://ror.org/00hx57361', 'country_code': 'US', 'type': 'education', 'lineage': ['https://openalex.org/I20089843']}], 'countries': ['US'], 'is_corresponding': False, 'raw_author_name': 'C.A. Floudas', 'raw_affiliation_strings': ['Department of Chemical Engineering, Princeton University, Princeton, New Jersey;'], 'affiliations': [{'raw_affiliation_string': 'Department of Chemical Engineering, Princeton University, Princeton, New Jersey;', 'institution_ids': ['https://openalex.org/I20089843']}]}], 'institution_assertions': [], 'countries_distinct_count': 1, 'institutions_distinct_count': 1, 'corresponding_author_ids': [], 'corresponding_institution_ids': [], 'apc_list': {'value': 2500, 'currency': 'USD', 'value_usd': 2500, 'provenance': 'doaj'}, 'apc_paid': None, 'fwci': 2.269, 'has_fulltext': False, 'cited_by_count': 144, 'citation_normalized_percentile': {'value': 0.889217, 'is_in_top_1_percent': False, 'is_in_top_10_percent': False}, 'cited_by_percentile_year': {'min': 97, 'max': 98}, 'biblio': {'volume': '85', 'issue': '4', 'first_page': '2119', 'last_page': '2146'}, 'is_retracted': False, 'is_paratext': False, 'primary_topic': {'id': 'https://openalex.org/T10044', 'display_name': 'Protein Structure and Dynamics', 'score': 0.9997, 'subfield': {'id': 'https://openalex.org/subfields/1312', 'display_name': 'Molecular Biology'}, 'field': {'id': 'https://openalex.org/fields/13', 'display_name': 'Biochemistry, Genetics and Molecular Biology'}, 'domain': {'id': 'https://openalex.org/domains/1', 'display_name': 'Life Sciences'}}, 'topics': [{'id': 'https://openalex.org/T10044', 'display_name': 'Protein Structure and Dynamics', 'score': 0.9997, 'subfield': {'id': 'https://openalex.org/subfields/1312', 'display_name': 'Molecular Biology'}, 'field': {'id': 'https://openalex.org/fields/13', 'display_name': 'Biochemistry, Genetics and Molecular Biology'}, 'domain': {'id': 'https://openalex.org/domains/1', 'display_name': 'Life Sciences'}}, {'id': 'https://openalex.org/T10521', 'display_name': 'RNA and protein synthesis mechanisms', 'score': 0.9979, 'subfield': {'id': 'https://openalex.org/subfields/1312', 'display_name': 'Molecular Biology'}, 'field': {'id': 'https://openalex.org/fields/13', 'display_name': 'Biochemistry, Genetics and Molecular Biology'}, 'domain': {'id': 'https://openalex.org/domains/1', 'display_name': 'Life Sciences'}}, {'id': 'https://openalex.org/T12254', 'display_name': 'Machine Learning in Bioinformatics', 'score': 0.9957, 'subfield': {'id': 'https://openalex.org/subfields/1312', 'display_name': 'Molecular Biology'}, 'field': {'id': 'https://openalex.org/fields/13', 'display_name': 'Biochemistry, Genetics and Molecular Biology'}, 'domain': {'id': 'https://openalex.org/domains/1', 'display_name': 'Life Sciences'}}], 'keywords': [{'id': 'https://openalex.org/keywords/structural-genomics', 'display_name': 'Structural genomics', 'score': 0.8579314}, {'id': 'https://openalex.org/keywords/comparative-genomics', 'display_name': 'Comparative Genomics', 'score': 0.49608573}, {'id': 'https://openalex.org/keywords/gene-prediction', 'display_name': 'Gene prediction', 'score': 0.4839678}, {'id': 'https://openalex.org/keywords/sequence', 'display_name': 'Sequence (biology)', 'score': 0.47757533}, {'id': 'https://openalex.org/keywords/folding', 'display_name': 'Folding (DSP implementation)', 'score': 0.46112034}, {'id': 'https://openalex.org/keywords/computational-genomics', 'display_name': 'Computational genomics', 'score': 0.44137955}], 'concepts': [{'id': 'https://openalex.org/C192772702', 'wikidata': 'https://www.wikidata.org/wiki/Q2583975', 'display_name': 'Structural genomics', 'level': 3, 'score': 0.8579314}, {'id': 'https://openalex.org/C18051474', 'wikidata': 'https://www.wikidata.org/wiki/Q899656', 'display_name': 'Protein structure prediction', 'level': 3, 'score': 0.7313534}, {'id': 'https://openalex.org/C70721500', 'wikidata': 'https://www.wikidata.org/wiki/Q177005', 'display_name': 'Computational biology', 'level': 1, 'score': 0.7145936}, {'id': 'https://openalex.org/C189206191', 'wikidata': 'https://www.wikidata.org/wiki/Q222046', 'display_name': 'Genomics', 'level': 4, 'score': 0.6594227}, {'id': 'https://openalex.org/C2781442258', 'wikidata': 'https://www.wikidata.org/wiki/Q46310', 'display_name': 'Ab initio', 'level': 2, 'score': 0.53727496}, {'id': 'https://openalex.org/C105176652', 'wikidata': 'https://www.wikidata.org/wiki/Q1147112', 'display_name': 'Comparative genomics', 'level': 5, 'score': 0.49608573}, {'id': 'https://openalex.org/C141231307', 'wikidata': 'https://www.wikidata.org/wiki/Q7020', 'display_name': 'Genome', 'level': 3, 'score': 0.4901639}, {'id': 'https://openalex.org/C105565629', 'wikidata': 'https://www.wikidata.org/wiki/Q1248292', 'display_name': 'Gene prediction', 'level': 4, 'score': 0.4839678}, {'id': 'https://openalex.org/C2778112365', 'wikidata': 'https://www.wikidata.org/wiki/Q3511065', 'display_name': 'Sequence (biology)', 'level': 2, 'score': 0.47757533}, {'id': 'https://openalex.org/C204328495', 'wikidata': 'https://www.wikidata.org/wiki/Q847556', 'display_name': 'Protein folding', 'level': 2, 'score': 0.46895924}, {'id': 'https://openalex.org/C2776545253', 'wikidata': 'https://www.wikidata.org/wiki/Q5464292', 'display_name': 'Folding (DSP implementation)', 'level': 2, 'score': 0.46112034}, {'id': 'https://openalex.org/C39238701', 'wikidata': 'https://www.wikidata.org/wiki/Q2091816', 'display_name': 'Computational genomics', 'level': 5, 'score': 0.44137955}, {'id': 'https://openalex.org/C47701112', 'wikidata': 'https://www.wikidata.org/wiki/Q735188', 'display_name': 'Protein structure', 'level': 2, 'score': 0.4201151}, {'id': 'https://openalex.org/C41008148', 'wikidata': 'https://www.wikidata.org/wiki/Q21198', 'display_name': 'Computer science', 'level': 0, 'score': 0.40789437}, {'id': 'https://openalex.org/C86803240', 'wikidata': 'https://www.wikidata.org/wiki/Q420', 'display_name': 'Biology', 'level': 0, 'score': 0.3752324}, {'id': 'https://openalex.org/C60644358', 'wikidata': 'https://www.wikidata.org/wiki/Q128570', 'display_name': 'Bioinformatics', 'level': 1, 'score': 0.35337874}, {'id': 'https://openalex.org/C104317684', 'wikidata': 'https://www.wikidata.org/wiki/Q7187', 'display_name': 'Gene', 'level': 2, 'score': 0.30096886}, {'id': 'https://openalex.org/C54355233', 'wikidata': 'https://www.wikidata.org/wiki/Q7162', 'display_name': 'Genetics', 'level': 1, 'score': 0.2152178}, {'id': 'https://openalex.org/C185592680', 'wikidata': 'https://www.wikidata.org/wiki/Q2329', 'display_name': 'Chemistry', 'level': 0, 'score': 0.20951992}, {'id': 'https://openalex.org/C127413603', 'wikidata': 'https://www.wikidata.org/wiki/Q11023', 'display_name': 'Engineering', 'level': 0, 'score': 0.13703492}, {'id': 'https://openalex.org/C55493867', 'wikidata': 'https://www.wikidata.org/wiki/Q7094', 'display_name': 'Biochemistry', 'level': 1, 'score': 0.103972554}, {'id': 'https://openalex.org/C178790620', 'wikidata': 'https://www.wikidata.org/wiki/Q11351', 'display_name': 'Organic chemistry', 'level': 1, 'score': 0.0}, {'id': 'https://openalex.org/C119599485', 'wikidata': 'https://www.wikidata.org/wiki/Q43035', 'display_name': 'Electrical engineering', 'level': 1, 'score': 0.0}], 'mesh': [{'descriptor_ui': 'D000465', 'descriptor_name': 'Algorithms', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': True}, {'descriptor_ui': 'D000596', 'descriptor_name': 'Amino Acids', 'qualifier_ui': 'Q000737', 'qualifier_name': 'chemistry', 'is_major_topic': True}, {'descriptor_ui': 'D008958', 'descriptor_name': 'Models, Molecular', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': True}, {'descriptor_ui': 'D011506', 'descriptor_name': 'Proteins', 'qualifier_ui': 'Q000737', 'qualifier_name': 'chemistry', 'is_major_topic': True}, {'descriptor_ui': 'D020539', 'descriptor_name': 'Sequence Analysis, Protein', 'qualifier_ui': 'Q000379', 'qualifier_name': 'methods', 'is_major_topic': True}, {'descriptor_ui': 'D000595', 'descriptor_name': 'Amino Acid Sequence', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D000596', 'descriptor_name': 'Amino Acids', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D001665', 'descriptor_name': 'Binding Sites', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D020169', 'descriptor_name': 'Caspases', 'qualifier_ui': 'Q000737', 'qualifier_name': 'chemistry', 'is_major_topic': False}, {'descriptor_ui': 'D020169', 'descriptor_name': 'Caspases', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D003198', 'descriptor_name': 'Computer Simulation', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D008969', 'descriptor_name': 'Molecular Sequence Data', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D011485', 'descriptor_name': 'Protein Binding', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D011487', 'descriptor_name': 'Protein Conformation', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D017510', 'descriptor_name': 'Protein Folding', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D017433', 'descriptor_name': 'Protein Structure, Secondary', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D017434', 'descriptor_name': 'Protein Structure, Tertiary', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D011506', 'descriptor_name': 'Proteins', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D011786', 'descriptor_name': 'Quality Control', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}, {'descriptor_ui': 'D020539', 'descriptor_name': 'Sequence Analysis, Protein', 'qualifier_ui': '', 'qualifier_name': None, 'is_major_topic': False}], 'locations_count': 4, 'locations': [{'is_oa': True, 'landing_page_url': 'https://doi.org/10.1016/s0006-3495(03)74640-2', 'pdf_url': 'https://www.cell.com/article/S0006349503746402/pdf', 'source': {'id': 'https://openalex.org/S98085912', 'display_name': 'Biophysical Journal', 'issn_l': '0006-3495', 'issn': ['0006-3495', '1542-0086'], 'is_oa': False, 'is_in_doaj': False, 'is_core': True, 'host_organization': 'https://openalex.org/P4310320990', 'host_organization_name': 'Elsevier BV', 'host_organization_lineage': ['https://openalex.org/P4310320990'], 'host_organization_lineage_names': ['Elsevier BV'], 'type': 'journal'}, 'license': 'publisher-specific-oa', 'license_id': 'https://openalex.org/licenses/publisher-specific-oa', 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, {'is_oa': True, 'landing_page_url': 'https://europepmc.org/articles/pmc1303441', 'pdf_url': 'https://europepmc.org/articles/pmc1303441?pdf=render', 'source': {'id': 'https://openalex.org/S4306400806', 'display_name': 'Europe PMC (PubMed Central)', 'issn_l': None, 'issn': None, 'is_oa': True, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I1303153112', 'host_organization_name': 'European Bioinformatics Institute', 'host_organization_lineage': ['https://openalex.org/I1303153112'], 'host_organization_lineage_names': ['European Bioinformatics Institute'], 'type': 'repository'}, 'license': None, 'license_id': None, 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, {'is_oa': True, 'landing_page_url': 'https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1303441', 'pdf_url': None, 'source': {'id': 'https://openalex.org/S2764455111', 'display_name': 'PubMed Central', 'issn_l': None, 'issn': None, 'is_oa': True, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I1299303238', 'host_organization_name': 'National Institutes of Health', 'host_organization_lineage': ['https://openalex.org/I1299303238'], 'host_organization_lineage_names': ['National Institutes of Health'], 'type': 'repository'}, 'license': None, 'license_id': None, 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, {'is_oa': False, 'landing_page_url': 'https://pubmed.ncbi.nlm.nih.gov/14507680', 'pdf_url': None, 'source': {'id': 'https://openalex.org/S4306525036', 'display_name': 'PubMed', 'issn_l': None, 'issn': None, 'is_oa': False, 'is_in_doaj': False, 'is_core': False, 'host_organization': 'https://openalex.org/I1299303238', 'host_organization_name': 'National Institutes of Health', 'host_organization_lineage': ['https://openalex.org/I1299303238'], 'host_organization_lineage_names': ['National Institutes of Health'], 'type': 'repository'}, 'license': None, 'license_id': None, 'version': None, 'is_accepted': False, 'is_published': False}], 'best_oa_location': {'is_oa': True, 'landing_page_url': 'https://doi.org/10.1016/s0006-3495(03)74640-2', 'pdf_url': 'https://www.cell.com/article/S0006349503746402/pdf', 'source': {'id': 'https://openalex.org/S98085912', 'display_name': 'Biophysical Journal', 'issn_l': '0006-3495', 'issn': ['0006-3495', '1542-0086'], 'is_oa': False, 'is_in_doaj': False, 'is_core': True, 'host_organization': 'https://openalex.org/P4310320990', 'host_organization_name': 'Elsevier BV', 'host_organization_lineage': ['https://openalex.org/P4310320990'], 'host_organization_lineage_names': ['Elsevier BV'], 'type': 'journal'}, 'license': 'publisher-specific-oa', 'license_id': 'https://openalex.org/licenses/publisher-specific-oa', 'version': 'publishedVersion', 'is_accepted': True, 'is_published': True}, 'sustainable_development_goals': [{'id': 'https://metadata.un.org/sdg/9', 'display_name': 'Industry, innovation and infrastructure', 'score': 0.45}], 'grants': [], 'datasets': [], 'versions': [], 'referenced_works_count': 94, 'referenced_works': ['https://openalex.org/W142594794', 'https://openalex.org/W1510064193', 'https://openalex.org/W1537016059', 'https://openalex.org/W1566883694', 'https://openalex.org/W1567853508', 'https://openalex.org/W1590094999', 'https://openalex.org/W1603446717', 'https://openalex.org/W1658649599', 'https://openalex.org/W1968143987', 'https://openalex.org/W1969007008', 'https://openalex.org/W1970397085', 'https://openalex.org/W1970984671', 'https://openalex.org/W1973987247', 'https://openalex.org/W1980374511', 'https://openalex.org/W1981009968', 'https://openalex.org/W1981367768', 'https://openalex.org/W1982364701', 'https://openalex.org/W1982446140', 'https://openalex.org/W1984214206', 'https://openalex.org/W1984425167', 'https://openalex.org/W1988250488', 'https://openalex.org/W1989264657', 'https://openalex.org/W1997639796', 'https://openalex.org/W2001897845', 'https://openalex.org/W2005568087', 'https://openalex.org/W2006159531', 'https://openalex.org/W2013136212', 'https://openalex.org/W2013238066', 'https://openalex.org/W2014055999', 'https://openalex.org/W2015318411', 'https://openalex.org/W2016690114', 'https://openalex.org/W2021534482', 'https://openalex.org/W2021953523', 'https://openalex.org/W2022058405', 'https://openalex.org/W2024060531', 'https://openalex.org/W2024759709', 'https://openalex.org/W2026258231', 'https://openalex.org/W2028276552', 'https://openalex.org/W2029292832', 'https://openalex.org/W2033586482', 'https://openalex.org/W2036578954', 'https://openalex.org/W2038714686', 'https://openalex.org/W2041369927', 'https://openalex.org/W2044336609', 'https://openalex.org/W2047163848', 'https://openalex.org/W2056371558', 'https://openalex.org/W2062081085', 'https://openalex.org/W2062123114', 'https://openalex.org/W2062327179', 'https://openalex.org/W2064731770', 'https://openalex.org/W2065283382', 'https://openalex.org/W2065864756', 'https://openalex.org/W2066010782', 'https://openalex.org/W2066129260', 'https://openalex.org/W2076368603', 'https://openalex.org/W2084367350', 'https://openalex.org/W2087149342', 'https://openalex.org/W2094654075', 'https://openalex.org/W2099752571', 'https://openalex.org/W2101247857', 'https://openalex.org/W2103241294', 'https://openalex.org/W2106619251', 'https://openalex.org/W2106882534', 'https://openalex.org/W2107143867', 'https://openalex.org/W2107538253', 'https://openalex.org/W2110397834', 'https://openalex.org/W2115848690', 'https://openalex.org/W2116975070', 'https://openalex.org/W2118250094', 'https://openalex.org/W2120725832', 'https://openalex.org/W2121876872', 'https://openalex.org/W2141216359', 'https://openalex.org/W2142529984', 'https://openalex.org/W2144362290', 'https://openalex.org/W2144483796', 'https://openalex.org/W2147905080', 'https://openalex.org/W2148480106', 'https://openalex.org/W2149057240', 'https://openalex.org/W2149478651', 'https://openalex.org/W2150986607', 'https://openalex.org/W2153187042', 'https://openalex.org/W2154106236', 'https://openalex.org/W2157177142', 'https://openalex.org/W2158714788', 'https://openalex.org/W2161896699', 'https://openalex.org/W2170471837', 'https://openalex.org/W2171742422', 'https://openalex.org/W2528469474', 'https://openalex.org/W2595833503', 'https://openalex.org/W3199387913', 'https://openalex.org/W4231757017', 'https://openalex.org/W4237675662', 'https://openalex.org/W4238484605', 'https://openalex.org/W4243775915'], 'related_works': ['https://openalex.org/W3167769742', 'https://openalex.org/W2384478968', 'https://openalex.org/W2365466262', 'https://openalex.org/W2170471837', 'https://openalex.org/W2147556320', 'https://openalex.org/W2098218989', 'https://openalex.org/W2057134381', 'https://openalex.org/W1975122118', 'https://openalex.org/W1522504836', 'https://openalex.org/W141916262'], 'abstract_inverted_index': None, 'cited_by_api_url': 'https://api.openalex.org/works?filter=cites:W1975122118', 'counts_by_year': [{'year': 2024, 'cited_by_count': 2}, {'year': 2023, 'cited_by_count': 3}, {'year': 2022, 'cited_by_count': 13}, {'year': 2021, 'cited_by_count': 3}, {'year': 2020, 'cited_by_count': 2}, {'year': 2018, 'cited_by_count': 3}, {'year': 2017, 'cited_by_count': 6}, {'year': 2016, 'cited_by_count': 2}, {'year': 2015, 'cited_by_count': 10}, {'year': 2014, 'cited_by_count': 5}, {'year': 2013, 'cited_by_count': 12}, {'year': 2012, 'cited_by_count': 9}], 'updated_date': '2024-12-09T14:22:43.726433', 'created_date': '2016-06-24'}